RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 LYZL1Q6UWQ5 148 aa7.6□□□□□ -1.19
LIG3-207ENST00000586119 ZFP2Q6ZN57 461 aa7.6□□□□□ -1.19
LIG3-207ENST00000586119 OR10AG1Q8NH19 301 aa7.6□□□□□ -1.19
LIG3-207ENST00000586119 GTSF1Q8WW33 167 aa7.6□□□□□ -1.19
LIG3-207ENST00000586119 BORCS7Q96B45 105 aa7.6□□□□□ -1.19
LIG3-207ENST00000586119 TPPP3Q9BW30 176 aa7.6□□□□□ -1.19
LIG3-207ENST00000586119 SMIM27A0A1W2PRY6 76 aa7.59□□□□□ -1.19
LIG3-207ENST00000586119 CIRBP-AS1Q8TBR5 109 aa7.59□□□□□ -1.19
LIG3-207ENST00000586119 C12orf57Q99622 126 aa7.59□□□□□ -1.19
LIG3-207ENST00000586119 CTDSP1Q9GZU7 261 aa7.59□□□□□ -1.19
LIG3-207ENST00000586119 NAT8BQ9UHF3 227 aa7.59□□□□□ -1.19
LIG3-207ENST00000586119 KLK12Q9UKR0 248 aa7.59□□□□□ -1.19
LIG3-207ENST00000586119 IGKV2D-24A0A075B6R9 120 aa7.58□□□□□ -1.2
LIG3-207ENST00000586119 HIGD1CA8MV81 97 aa7.58□□□□□ -1.2
LIG3-207ENST00000586119 S100A6P06703 90 aa7.58□□□□□ -1.2
LIG3-207ENST00000586119 TRGC1P0CF51 173 aa7.58□□□□□ -1.2
LIG3-207ENST00000586119 AKR1D1P51857 326 aa7.58□□□□□ -1.2
LIG3-207ENST00000586119 NIT1Q86X76 327 aa7.58□□□□□ -1.2
LIG3-207ENST00000586119 AP1S3Q96PC3 154 aa7.58□□□□□ -1.2
LIG3-207ENST00000586119 CHAC1Q9BUX1 264 aa7.58□□□□□ -1.2
LIG3-207ENST00000586119 TMEM242Q9NWH2 141 aa7.58□□□□□ -1.2
LIG3-207ENST00000586119 A0A087WWC5 75 aa7.57□□□□□ -1.2
LIG3-207ENST00000586119 A0A1B0GUT8 65 aa7.57□□□□□ -1.2
LIG3-207ENST00000586119 NTF3P20783 257 aa7.57□□□□□ -1.2
LIG3-207ENST00000586119 PGLYRP4Q96LB8 373 aa7.57□□□□□ -1.2
LIG3-207ENST00000586119 IMMP2LQ96T52 175 aa7.57□□□□□ -1.2
LIG3-207ENST00000586119 A0A087WWL8 130 aa7.56□□□□□ -1.2
LIG3-207ENST00000586119 A0A1B0GW15 77 aa7.56□□□□□ -1.2
LIG3-207ENST00000586119 C7orf77A4D0Y5 90 aa7.56□□□□□ -1.2
LIG3-207ENST00000586119 C5orf52A6NGY3 159 aa7.56□□□□□ -1.2
LIG3-207ENST00000586119 SMIM17P0DL12 118 aa7.56□□□□□ -1.2
LIG3-207ENST00000586119 HNRNPA3P51991 378 aaKnown RBP7.56□□□□□ -1.2
LIG3-207ENST00000586119 RIGQ13278 110 aa7.56□□□□□ -1.2
LIG3-207ENST00000586119 TWIST1Q15672 202 aa7.56□□□□□ -1.2
LIG3-207ENST00000586119 SMIM15Q7Z3B0 74 aa7.56□□□□□ -1.2
LIG3-207ENST00000586119 Q8N976 141 aa7.56□□□□□ -1.2
LIG3-207ENST00000586119 NUP35Q8NFH5 326 aa7.56□□□□□ -1.2
LIG3-207ENST00000586119 UBE2WQ96B02 151 aa7.56□□□□□ -1.2
LIG3-207ENST00000586119 RPS10P5Q9NQ39 176 aa7.56□□□□□ -1.2
LIG3-207ENST00000586119 MUC21A0A0G2JKD1 596 aa7.55□□□□□ -1.2
LIG3-207ENST00000586119 MUC21A0A140T8X8 626 aa7.55□□□□□ -1.2
LIG3-207ENST00000586119 RAB5AP20339 215 aa7.55□□□□□ -1.2
LIG3-207ENST00000586119 RAB4BP61018 213 aa7.55□□□□□ -1.2
LIG3-207ENST00000586119 FAM74A4Q5TZK3 123 aa7.55□□□□□ -1.2
LIG3-207ENST00000586119 KIF25-AS1Q9Y6Z4 181 aa7.55□□□□□ -1.2
LIG3-207ENST00000586119 TRAV9-1A0A075B6T8 112 aa7.54□□□□□ -1.2
LIG3-207ENST00000586119 SSTP61278 116 aa7.54□□□□□ -1.2
LIG3-207ENST00000586119 SERTAD4-AS1Q5TG53 156 aa7.54□□□□□ -1.2
LIG3-207ENST00000586119 KCNIP4Q6PIL6 250 aa7.54□□□□□ -1.2
LIG3-207ENST00000586119 ATP5L2Q7Z4Y8 100 aa7.54□□□□□ -1.2
LIG3-207ENST00000586119 DPH3P1Q9H4G8 78 aa7.54□□□□□ -1.2
LIG3-207ENST00000586119 URGCP-MRPS24S4R325 110 aa7.54□□□□□ -1.2
LIG3-207ENST00000586119 TRBV10-1A0A0K0K1A3 114 aa7.53□□□□□ -1.2
LIG3-207ENST00000586119 ENHOQ6UWT2 76 aa7.53□□□□□ -1.2
LIG3-207ENST00000586119 RMI2Q96E14 147 aa7.53□□□□□ -1.2
LIG3-207ENST00000586119 BTF3L4Q96K17 158 aa7.53□□□□□ -1.2
LIG3-207ENST00000586119 COX11Q9Y6N1 276 aa7.53□□□□□ -1.2
LIG3-207ENST00000586119 H7C1H1 209 aa7.52□□□□□ -1.21
LIG3-207ENST00000586119 OXTP01178 125 aa7.52□□□□□ -1.21
LIG3-207ENST00000586119 S100PP25815 95 aa7.52□□□□□ -1.21
LIG3-207ENST00000586119 ZNF56Q15929 161 aa7.52□□□□□ -1.21
LIG3-207ENST00000586119 TMEM191AQ9H0A3 160 aa7.52□□□□□ -1.21
LIG3-207ENST00000586119 A0A087WX48 190 aa7.51□□□□□ -1.21
LIG3-207ENST00000586119 A0A1B0GXF2 115 aa7.51□□□□□ -1.21
LIG3-207ENST00000586119 TMEM262E9PQX1 116 aa7.51□□□□□ -1.21
LIG3-207ENST00000586119 F5H697 171 aa7.51□□□□□ -1.21
LIG3-207ENST00000586119 PANO1I0J062 215 aa7.51□□□□□ -1.21
LIG3-207ENST00000586119 UBE2D3P61077 147 aa7.51□□□□□ -1.21
LIG3-207ENST00000586119 SNRPEP62304 92 aaKnown RBP7.51□□□□□ -1.21
LIG3-207ENST00000586119 UBE2D2P62837 147 aa7.51□□□□□ -1.21
LIG3-207ENST00000586119 HBBP68871 147 aa7.51□□□□□ -1.21
LIG3-207ENST00000586119 RASL11AQ6T310 242 aa7.51□□□□□ -1.21
LIG3-207ENST00000586119 GATD1Q8NB37 220 aa7.51□□□□□ -1.21
LIG3-207ENST00000586119 YPEL4Q96NS1 127 aa7.51□□□□□ -1.21
LIG3-207ENST00000586119 PLA2G2DQ9UNK4 145 aa7.51□□□□□ -1.21
LIG3-207ENST00000586119 PCP4L1A6NKN8 68 aa7.5□□□□□ -1.21
LIG3-207ENST00000586119 MGPP08493 103 aa7.5□□□□□ -1.21
LIG3-207ENST00000586119 USP17L23D6RBM5 183 aa7.49□□□□□ -1.21
LIG3-207ENST00000586119 PRSS1P07477 247 aa7.49□□□□□ -1.21
LIG3-207ENST00000586119 RPL37AP61513 92 aaKnown RBP7.49□□□□□ -1.21
LIG3-207ENST00000586119 RPL36AP83881 106 aaKnown RBP7.49□□□□□ -1.21
LIG3-207ENST00000586119 FABP9Q0Z7S8 132 aa7.49□□□□□ -1.21
LIG3-207ENST00000586119 MPV17L2Q567V2 206 aa7.49□□□□□ -1.21
LIG3-207ENST00000586119 MRPL54Q6P161 138 aaKnown RBP7.49□□□□□ -1.21
LIG3-207ENST00000586119 RPL36ALQ969Q0 106 aaKnown RBP7.49□□□□□ -1.21
LIG3-207ENST00000586119 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.49□□□□□ -1.21
LIG3-207ENST00000586119 TRBV7-3A0A075B6L6 115 aa7.48□□□□□ -1.21
LIG3-207ENST00000586119 M0QY20 66 aa7.48□□□□□ -1.21
LIG3-207ENST00000586119 CAMPP49913 170 aa7.48□□□□□ -1.21
LIG3-207ENST00000586119 ELOBQ15370 118 aa7.48□□□□□ -1.21
LIG3-207ENST00000586119 COX19Q49B96 90 aa7.48□□□□□ -1.21
LIG3-207ENST00000586119 FAM104BQ5XKR9 115 aa7.48□□□□□ -1.21
LIG3-207ENST00000586119 SUMO4Q6EEV6 95 aa7.48□□□□□ -1.21
LIG3-207ENST00000586119 NEXN-AS1Q8NBZ9 246 aa7.48□□□□□ -1.21
LIG3-207ENST00000586119 MRAP2Q96G30 205 aa7.48□□□□□ -1.21
LIG3-207ENST00000586119 C1orf43Q9BWL3 253 aa7.48□□□□□ -1.21
LIG3-207ENST00000586119 TRBV6-8A0A0A6YYG3 113 aa7.47□□□□□ -1.21
LIG3-207ENST00000586119 PPP1R17O96001 155 aa7.47□□□□□ -1.21
LIG3-207ENST00000586119 HLA-DQA1P01909 254 aa7.47□□□□□ -1.21
LIG3-207ENST00000586119 ANGP03950 147 aaKnown RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms