RNA–Protein interactions for RNA: ENST00000584966.1

CDH8-213, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-213ENST00000584966 RAB4BP61018 213 aa3.86□□□□□ -1.79
CDH8-213ENST00000584966 SLC7A5P1Q8MH63 180 aa3.86□□□□□ -1.79
CDH8-213ENST00000584966 C15orf54Q8N8G6 183 aa3.86□□□□□ -1.79
CDH8-213ENST00000584966 TPPP3Q9BW30 176 aa3.86□□□□□ -1.79
CDH8-213ENST00000584966 CARHSP1Q9Y2V2 147 aaKnown RBP3.86□□□□□ -1.79
CDH8-213ENST00000584966 LINC00588Q9Y4M8 146 aa3.86□□□□□ -1.79
CDH8-213ENST00000584966 LRP1BQ9NZR2 4599 aa3.86□□□□□ -1.79
CDH8-213ENST00000584966 IGLV5-52A0A0A0MRZ9 124 aa3.85□□□□□ -1.79
CDH8-213ENST00000584966 A0A1B0GUT8 65 aa3.85□□□□□ -1.79
CDH8-213ENST00000584966 A0A1B0GXF2 115 aa3.85□□□□□ -1.79
CDH8-213ENST00000584966 M0QY20 66 aa3.85□□□□□ -1.79
CDH8-213ENST00000584966 GAS8-AS1O95177 125 aa3.85□□□□□ -1.79
CDH8-213ENST00000584966 RHOHQ15669 191 aa3.85□□□□□ -1.79
CDH8-213ENST00000584966 TWIST1Q15672 202 aa3.85□□□□□ -1.79
CDH8-213ENST00000584966 FAM74A4Q5TZK3 123 aa3.85□□□□□ -1.79
CDH8-213ENST00000584966 LYPD5Q6UWN5 251 aa3.85□□□□□ -1.79
CDH8-213ENST00000584966 PRR26Q8N8Z3 221 aa3.85□□□□□ -1.79
CDH8-213ENST00000584966 NRACQ8N912 160 aa3.85□□□□□ -1.79
CDH8-213ENST00000584966 GATD1Q8NB37 220 aa3.85□□□□□ -1.79
CDH8-213ENST00000584966 ZNRF2Q8NHG8 242 aa3.85□□□□□ -1.79
CDH8-213ENST00000584966 RNF185Q96GF1 192 aa3.85□□□□□ -1.79
CDH8-213ENST00000584966 TRBV10-1A0A0K0K1A3 114 aa3.84□□□□□ -1.79
CDH8-213ENST00000584966 PPP1R2P9O14990 202 aa3.84□□□□□ -1.79
CDH8-213ENST00000584966 LY6G6CO95867 125 aa3.84□□□□□ -1.79
CDH8-213ENST00000584966 MT-ND4LP03901 98 aa3.84□□□□□ -1.79
CDH8-213ENST00000584966 TRGC1P0CF51 173 aa3.84□□□□□ -1.79
CDH8-213ENST00000584966 UBE2D3P61077 147 aa3.84□□□□□ -1.79
CDH8-213ENST00000584966 UBE2D2P62837 147 aa3.84□□□□□ -1.79
CDH8-213ENST00000584966 MRPL23Q16540 153 aaKnown RBP3.84□□□□□ -1.79
CDH8-213ENST00000584966 RPL36ALQ969Q0 106 aaKnown RBP3.84□□□□□ -1.79
CDH8-213ENST00000584966 AP1S3Q96PC3 154 aa3.84□□□□□ -1.79
CDH8-213ENST00000584966 UPK3BQ9BT76 320 aa3.84□□□□□ -1.79
CDH8-213ENST00000584966 TMEM191AQ9H0A3 160 aa3.84□□□□□ -1.79
CDH8-213ENST00000584966 DPH3P1Q9H4G8 78 aa3.84□□□□□ -1.79
CDH8-213ENST00000584966 NAT8BQ9UHF3 227 aa3.84□□□□□ -1.79
CDH8-213ENST00000584966 ICOSQ9Y6W8 199 aa3.84□□□□□ -1.79
CDH8-213ENST00000584966 TRBV7-3A0A075B6L6 115 aa3.83□□□□□ -1.8
CDH8-213ENST00000584966 C7orf77A4D0Y5 90 aa3.83□□□□□ -1.8
CDH8-213ENST00000584966 RAB4AP20338 218 aa3.83□□□□□ -1.8
CDH8-213ENST00000584966 SRIP30626 198 aa3.83□□□□□ -1.8
CDH8-213ENST00000584966 GAGE5Q13069 117 aa3.83□□□□□ -1.8
CDH8-213ENST00000584966 ZNF56Q15929 161 aa3.83□□□□□ -1.8
CDH8-213ENST00000584966 LBHQ53QV2 105 aaPredicted RBP3.83□□□□□ -1.8
CDH8-213ENST00000584966 ATRAIDQ6UW56 229 aa3.83□□□□□ -1.8
CDH8-213ENST00000584966 Q6ZR54 194 aa3.83□□□□□ -1.8
CDH8-213ENST00000584966 NEGR1Q7Z3B1 354 aa3.83□□□□□ -1.8
CDH8-213ENST00000584966 IMMP2LQ96T52 175 aa3.83□□□□□ -1.8
CDH8-213ENST00000584966 PRADC1Q9BSG0 188 aa3.83□□□□□ -1.8
CDH8-213ENST00000584966 TMEM242Q9NWH2 141 aa3.83□□□□□ -1.8
CDH8-213ENST00000584966 MRPS16Q9Y3D3 137 aaKnown RBP3.83□□□□□ -1.8
CDH8-213ENST00000584966 APOBP04114 4563 aaKnown RBP3.83□□□□□ -1.8
CDH8-213ENST00000584966 A0A087WWC5 75 aa3.82□□□□□ -1.8
CDH8-213ENST00000584966 TRAV26-2A0A0B4J265 109 aa3.82□□□□□ -1.8
CDH8-213ENST00000584966 APOC3P02656 99 aa3.82□□□□□ -1.8
CDH8-213ENST00000584966 MGPP08493 103 aa3.82□□□□□ -1.8
CDH8-213ENST00000584966 SMIM17P0DL12 118 aa3.82□□□□□ -1.8
CDH8-213ENST00000584966 RPS10P46783 165 aaKnown RBP3.82□□□□□ -1.8
CDH8-213ENST00000584966 CCL18P55774 89 aa3.82□□□□□ -1.8
CDH8-213ENST00000584966 RIGQ13278 110 aa3.82□□□□□ -1.8
CDH8-213ENST00000584966 MRPL51Q4U2R6 128 aaKnown RBP3.82□□□□□ -1.8
CDH8-213ENST00000584966 FAM104BQ5XKR9 115 aa3.82□□□□□ -1.8
CDH8-213ENST00000584966 MRPL54Q6P161 138 aaKnown RBP3.82□□□□□ -1.8
CDH8-213ENST00000584966 NTM-AS1Q6ZSK4 140 aa3.82□□□□□ -1.8
CDH8-213ENST00000584966 AMN1Q8IY45 258 aa3.82□□□□□ -1.8
CDH8-213ENST00000584966 ATP6V0E2Q8NHE4 81 aa3.82□□□□□ -1.8
CDH8-213ENST00000584966 RPL39LQ96EH5 51 aaKnown RBP3.82□□□□□ -1.8
CDH8-213ENST00000584966 YPEL4Q96NS1 127 aa3.82□□□□□ -1.8
CDH8-213ENST00000584966 GTSF1LQ9H1H1 148 aa3.82□□□□□ -1.8
CDH8-213ENST00000584966 Q9H8V8 135 aa3.82□□□□□ -1.8
CDH8-213ENST00000584966 NIT2Q9NQR4 276 aa3.82□□□□□ -1.8
CDH8-213ENST00000584966 TRBV6-5A0A0K0K1A5 114 aa3.81□□□□□ -1.8
CDH8-213ENST00000584966 A0A1B0GW15 77 aa3.81□□□□□ -1.8
CDH8-213ENST00000584966 SMKR1H3BMG3 65 aa3.81□□□□□ -1.8
CDH8-213ENST00000584966 POLR2KP53803 58 aaKnown RBP3.81□□□□□ -1.8
CDH8-213ENST00000584966 HBBP68871 147 aa3.81□□□□□ -1.8
CDH8-213ENST00000584966 RHEBQ15382 184 aa3.81□□□□□ -1.8
CDH8-213ENST00000584966 LELP1Q5T871 98 aa3.81□□□□□ -1.8
CDH8-213ENST00000584966 RASL11AQ6T310 242 aa3.81□□□□□ -1.8
CDH8-213ENST00000584966 SH2D6Q7Z4S9 175 aa3.81□□□□□ -1.8
CDH8-213ENST00000584966 ATP5L2Q7Z4Y8 100 aa3.81□□□□□ -1.8
CDH8-213ENST00000584966 WFDC10BQ8IUB3 73 aa3.81□□□□□ -1.8
CDH8-213ENST00000584966 FRZBQ92765 325 aa3.81□□□□□ -1.8
CDH8-213ENST00000584966 DNAJC30Q96LL9 226 aa3.81□□□□□ -1.8
CDH8-213ENST00000584966 IGLV2-18A0A075B6J9 118 aa3.8□□□□□ -1.8
CDH8-213ENST00000584966 TRBV24-1A0A075B6N3 115 aa3.8□□□□□ -1.8
CDH8-213ENST00000584966 IGHV3-38A0A0C4DH36 116 aa3.8□□□□□ -1.8
CDH8-213ENST00000584966 NBDYA0A0U1RRE5 68 aa3.8□□□□□ -1.8
CDH8-213ENST00000584966 DNAH10OSP0CZ25 163 aa3.8□□□□□ -1.8
CDH8-213ENST00000584966 RPL36AP83881 106 aaKnown RBP3.8□□□□□ -1.8
CDH8-213ENST00000584966 ELOBQ15370 118 aa3.8□□□□□ -1.8
CDH8-213ENST00000584966 NDUFA5Q16718 116 aa3.8□□□□□ -1.8
CDH8-213ENST00000584966 TMEM136Q6ZRR5 245 aa3.8□□□□□ -1.8
CDH8-213ENST00000584966 SMIM15Q7Z3B0 74 aa3.8□□□□□ -1.8
CDH8-213ENST00000584966 UBE2DNLQ8IWF7 75 aa3.8□□□□□ -1.8
CDH8-213ENST00000584966 SVBPQ8N300 66 aa3.8□□□□□ -1.8
CDH8-213ENST00000584966 BORCS7Q96B45 105 aa3.8□□□□□ -1.8
CDH8-213ENST00000584966 MRAP2Q96G30 205 aa3.8□□□□□ -1.8
CDH8-213ENST00000584966 BTF3L4Q96K17 158 aa3.8□□□□□ -1.8
CDH8-213ENST00000584966 RPS10P5Q9NQ39 176 aa3.8□□□□□ -1.8
CDH8-213ENST00000584966 BIRC6Q9NR09 4857 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms