RNA–Protein interactions for RNA: ENST00000584878.1

NLK-206, Transcript of nemo like kinase, humanhuman

TSL 1 (best)

Gene NLK, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLK-206ENST00000584878 LINC01600Q96MT4 127 aa1.3□□□□□ -2.2
NLK-206ENST00000584878 NKTRP30414 1462 aaKnown RBP1.3□□□□□ -2.2
NLK-206ENST00000584878 NUMA1Q14980 2115 aa1.3□□□□□ -2.2
NLK-206ENST00000584878 ARHGEF5Q12774 1597 aa1.3□□□□□ -2.2
NLK-206ENST00000584878 IGHV3-64A0A075B6Q5 118 aa1.29□□□□□ -2.2
NLK-206ENST00000584878 TRBV7-1A0A0A6YYK4 115 aa1.29□□□□□ -2.2
NLK-206ENST00000584878 TRAV13-2A0A0B4J235 113 aa1.29□□□□□ -2.2
NLK-206ENST00000584878 MUC21A0A140T8X8 626 aa1.29□□□□□ -2.2
NLK-206ENST00000584878 CRYM-AS1A6NIL9 109 aa1.29□□□□□ -2.2
NLK-206ENST00000584878 ODF3BA8MYP8 253 aa1.29□□□□□ -2.2
NLK-206ENST00000584878 NDUFC1O43677 76 aa1.29□□□□□ -2.2
NLK-206ENST00000584878 SPATA45Q537H7 98 aa1.29□□□□□ -2.2
NLK-206ENST00000584878 CYP4F30PQ9H0H9 118 aa1.29□□□□□ -2.2
NLK-206ENST00000584878 CDC42SE1Q9NRR8 79 aa1.29□□□□□ -2.2
NLK-206ENST00000584878 LINC00474Q9P2X8 69 aa1.29□□□□□ -2.2
NLK-206ENST00000584878 SYCP2Q9BX26 1530 aa1.29□□□□□ -2.2
NLK-206ENST00000584878 GLI2P10070 1586 aa1.29□□□□□ -2.2
NLK-206ENST00000584878 DIP2AQ14689 1571 aa1.29□□□□□ -2.2
NLK-206ENST00000584878 MAST1Q9Y2H9 1570 aa1.29□□□□□ -2.2
NLK-206ENST00000584878 ALKQ9UM73 1620 aa1.29□□□□□ -2.2
NLK-206ENST00000584878 MROH2AA6NES4 1674 aa1.29□□□□□ -2.2
NLK-206ENST00000584878 CROCC2H7BZ55 1655 aa1.29□□□□□ -2.2
NLK-206ENST00000584878 COL4A5P29400 1685 aa1.29□□□□□ -2.2
NLK-206ENST00000584878 AFDNP55196 1824 aaKnown RBP1.29□□□□□ -2.2
NLK-206ENST00000584878 ARFGEF1Q9Y6D6 1849 aa1.29□□□□□ -2.2
NLK-206ENST00000584878 A0A087WWC5 75 aa1.28□□□□□ -2.2
NLK-206ENST00000584878 LOC107984156A0A0G2JMH3 177 aa1.28□□□□□ -2.2
NLK-206ENST00000584878 KANTRA0A1W2PQU2 76 aa1.28□□□□□ -2.2
NLK-206ENST00000584878 TCRBV4S1A1TA0A5B7 111 aa1.28□□□□□ -2.2
NLK-206ENST00000584878 F2Z2F3 143 aa1.28□□□□□ -2.2
NLK-206ENST00000584878 H3BUT2 72 aa1.28□□□□□ -2.2
NLK-206ENST00000584878 H7BZZ5 65 aa1.28□□□□□ -2.2
NLK-206ENST00000584878 ERC2-IT1O76042 136 aa1.28□□□□□ -2.2
NLK-206ENST00000584878 UBE2D3P61077 147 aa1.28□□□□□ -2.2
NLK-206ENST00000584878 GNG11P61952 73 aa1.28□□□□□ -2.2
NLK-206ENST00000584878 UBE2G1P62253 170 aa1.28□□□□□ -2.2
NLK-206ENST00000584878 UBE2D2P62837 147 aa1.28□□□□□ -2.2
NLK-206ENST00000584878 KLKP1Q107X0 134 aa1.28□□□□□ -2.2
NLK-206ENST00000584878 WFDC2Q14508 124 aa1.28□□□□□ -2.2
NLK-206ENST00000584878 MPV17LQ2QL34 196 aa1.28□□□□□ -2.2
NLK-206ENST00000584878 C9orf116Q5BN46 136 aaPredicted RBP1.28□□□□□ -2.2
NLK-206ENST00000584878 NMSQ5H8A3 153 aa1.28□□□□□ -2.2
NLK-206ENST00000584878 CFAP126Q5VTH2 177 aa1.28□□□□□ -2.2
NLK-206ENST00000584878 KRTAP26-1Q6PEX3 210 aa1.28□□□□□ -2.2
NLK-206ENST00000584878 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.28□□□□□ -2.2
NLK-206ENST00000584878 CYP2G1PQ6ZSU1 146 aa1.28□□□□□ -2.2
NLK-206ENST00000584878 ZNF833PQ6ZTB9 187 aa1.28□□□□□ -2.2
NLK-206ENST00000584878 VMO1Q7Z5L0 202 aa1.28□□□□□ -2.2
NLK-206ENST00000584878 ARL17AQ8IVW1 177 aa1.28□□□□□ -2.2
NLK-206ENST00000584878 OR8B3Q8NGG8 313 aa1.28□□□□□ -2.2
NLK-206ENST00000584878 TMEM254Q8TBM7 123 aa1.28□□□□□ -2.2
NLK-206ENST00000584878 FAM167A-AS1Q96KT0 104 aa1.28□□□□□ -2.2
NLK-206ENST00000584878 ODF3Q96PU9 254 aa1.28□□□□□ -2.2
NLK-206ENST00000584878 MINOS1-NBL1R4GNA1 71 aa1.28□□□□□ -2.2
NLK-206ENST00000584878 ASXL1Q8IXJ9 1541 aa1.28□□□□□ -2.2
NLK-206ENST00000584878 CDC42BPGQ6DT37 1551 aa1.28□□□□□ -2.2
NLK-206ENST00000584878 LAMC1P11047 1609 aa1.28□□□□□ -2.2
NLK-206ENST00000584878 CICQ96RK0 1608 aaPredicted RBP1.28□□□□□ -2.2
NLK-206ENST00000584878 SCN7AQ01118 1682 aa1.28□□□□□ -2.2
NLK-206ENST00000584878 DIDO1Q9BTC0 2240 aaKnown RBP1.27□□□□□ -2.21
NLK-206ENST00000584878 KIAA2026Q5HYC2 2103 aa1.27□□□□□ -2.21
NLK-206ENST00000584878 MDC1Q14676 2089 aaKnown RBP1.27□□□□□ -2.21
NLK-206ENST00000584878 SIPA1L3O60292 1781 aaPredicted RBP1.27□□□□□ -2.21
NLK-206ENST00000584878 ADGRB2O60241 1585 aa1.27□□□□□ -2.21
NLK-206ENST00000584878 EHBP1L1Q8N3D4 1523 aa1.27□□□□□ -2.21
NLK-206ENST00000584878 TRAV10A0A0B4J240 114 aa1.27□□□□□ -2.21
NLK-206ENST00000584878 TRAV12-1A0A0B4J245 112 aa1.27□□□□□ -2.21
NLK-206ENST00000584878 A0A0J9YX75 114 aa1.27□□□□□ -2.21
NLK-206ENST00000584878 BCE1O60756 84 aa1.27□□□□□ -2.21
NLK-206ENST00000584878 ASAH2BP0C7U1 165 aa1.27□□□□□ -2.21
NLK-206ENST00000584878 EFNA4P52798 201 aa1.27□□□□□ -2.21
NLK-206ENST00000584878 SNRPFP62306 86 aaKnown RBP1.27□□□□□ -2.21
NLK-206ENST00000584878 PMCHL1Q16048 86 aa1.27□□□□□ -2.21
NLK-206ENST00000584878 DEFB113Q30KQ7 82 aa1.27□□□□□ -2.21
NLK-206ENST00000584878 RPL7L1Q6DKI1 246 aaKnown RBP1.27□□□□□ -2.21
NLK-206ENST00000584878 LYPD5Q6UWN5 251 aa1.27□□□□□ -2.21
NLK-206ENST00000584878 C2orf82Q6UX34 121 aa1.27□□□□□ -2.21
NLK-206ENST00000584878 Q8TAT8 98 aa1.27□□□□□ -2.21
NLK-206ENST00000584878 C18orf32Q8TCD1 76 aa1.27□□□□□ -2.21
NLK-206ENST00000584878 TIMM21Q9BVV7 248 aa1.27□□□□□ -2.21
NLK-206ENST00000584878 NXT2Q9NPJ8 142 aaKnown RBP1.27□□□□□ -2.21
NLK-206ENST00000584878 HIGD1BQ9P298 99 aa1.27□□□□□ -2.21
NLK-206ENST00000584878 C22orf24Q9Y442 160 aa1.27□□□□□ -2.21
NLK-206ENST00000584878 CR1P17927 2039 aa1.27□□□□□ -2.21
NLK-206ENST00000584878 PDCD11Q14690 1871 aaKnown RBP1.26□□□□□ -2.21
NLK-206ENST00000584878 LAMA4Q16363 1823 aa1.26□□□□□ -2.21
NLK-206ENST00000584878 COL4A2P08572 1712 aa1.26□□□□□ -2.21
NLK-206ENST00000584878 IFT172Q9UG01 1749 aa1.26□□□□□ -2.21
NLK-206ENST00000584878 CRYBG1Q9Y4K1 1723 aa1.26□□□□□ -2.21
NLK-206ENST00000584878 PREX1Q8TCU6 1659 aa1.26□□□□□ -2.21
NLK-206ENST00000584878 LRRC37A3O60309 1634 aa1.26□□□□□ -2.21
NLK-206ENST00000584878 UGGT1Q9NYU2 1555 aa1.26□□□□□ -2.21
NLK-206ENST00000584878 CEP170BQ9Y4F5 1589 aaPredicted RBP1.26□□□□□ -2.21
NLK-206ENST00000584878 SLIT2O94813 1529 aa1.26□□□□□ -2.21
NLK-206ENST00000584878 LRRC7Q96NW7 1537 aa1.26□□□□□ -2.21
NLK-206ENST00000584878 RALGAPBQ86X10 1494 aa1.26□□□□□ -2.21
NLK-206ENST00000584878 KIAA0100Q14667 2235 aaKnown RBP1.26□□□□□ -2.21
NLK-206ENST00000584878 A0A087WXM4 84 aa1.26□□□□□ -2.21
NLK-206ENST00000584878 CXorf51AA0A1B0GTR3 108 aa1.26□□□□□ -2.21
NLK-206ENST00000584878 HCG22E2RYF7 251 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms