RNA–Protein interactions for RNA: ENST00000582482.1

CDK5RAP3-225, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 2,455 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-225ENST00000582482 RIPPLY3P57055 190 aa7.75□□□□□ -1.17
CDK5RAP3-225ENST00000582482 PMVKQ15126 192 aa7.75□□□□□ -1.17
CDK5RAP3-225ENST00000582482 HIVEP1P15822 2718 aa7.75□□□□□ -1.17
CDK5RAP3-225ENST00000582482 TRAV8-3A0A0A6YYJ7 113 aa7.75□□□□□ -1.17
CDK5RAP3-225ENST00000582482 E9PLD3 99 aa7.75□□□□□ -1.17
CDK5RAP3-225ENST00000582482 CFAP126Q5VTH2 177 aa7.75□□□□□ -1.17
CDK5RAP3-225ENST00000582482 C11orf72Q8NBR9 251 aa7.75□□□□□ -1.17
CDK5RAP3-225ENST00000582482 ODF3Q96PU9 254 aa7.75□□□□□ -1.17
CDK5RAP3-225ENST00000582482 NSD1Q96L73 2696 aaPredicted RBP7.74□□□□□ -1.17
CDK5RAP3-225ENST00000582482 APOMO95445 188 aa7.74□□□□□ -1.17
CDK5RAP3-225ENST00000582482 OCIAD2Q56VL3 154 aa7.74□□□□□ -1.17
CDK5RAP3-225ENST00000582482 TRPT1Q86TN4 253 aaKnown RBP7.74□□□□□ -1.17
CDK5RAP3-225ENST00000582482 HIGD1BQ9P298 99 aa7.74□□□□□ -1.17
CDK5RAP3-225ENST00000582482 IGLV4-3A0A075B6K6 122 aa7.74□□□□□ -1.17
CDK5RAP3-225ENST00000582482 TRGV11A0A075B6L2 103 aa7.74□□□□□ -1.17
CDK5RAP3-225ENST00000582482 IGLL5B9A064 214 aa7.74□□□□□ -1.17
CDK5RAP3-225ENST00000582482 H3BMG7 143 aa7.74□□□□□ -1.17
CDK5RAP3-225ENST00000582482 C1orf158Q8N1D5 194 aa7.74□□□□□ -1.17
CDK5RAP3-225ENST00000582482 LINC01006Q8NI28 216 aa7.74□□□□□ -1.17
CDK5RAP3-225ENST00000582482 PEMTQ9UBM1 199 aa7.74□□□□□ -1.17
CDK5RAP3-225ENST00000582482 PF4P02776 101 aa7.73□□□□□ -1.17
CDK5RAP3-225ENST00000582482 NPC2P61916 151 aa7.73□□□□□ -1.17
CDK5RAP3-225ENST00000582482 LRRC75A-AS1Q8N1F1 130 aa7.73□□□□□ -1.17
CDK5RAP3-225ENST00000582482 C20orf203Q8NBC4 194 aa7.73□□□□□ -1.17
CDK5RAP3-225ENST00000582482 SPXQ9BT56 116 aa7.73□□□□□ -1.17
CDK5RAP3-225ENST00000582482 TM2D2Q9BX73 214 aa7.73□□□□□ -1.17
CDK5RAP3-225ENST00000582482 TRGV1A0A0A0MS02 117 aa7.73□□□□□ -1.17
CDK5RAP3-225ENST00000582482 I3L3M4 83 aa7.73□□□□□ -1.17
CDK5RAP3-225ENST00000582482 Q6ZTI0 123 aa7.73□□□□□ -1.17
CDK5RAP3-225ENST00000582482 ZNF479Q96JC4 524 aa7.73□□□□□ -1.17
CDK5RAP3-225ENST00000582482 LINC00467Q9BRT7 94 aa7.73□□□□□ -1.17
CDK5RAP3-225ENST00000582482 TRAV2A0A0B4J234 112 aa7.72□□□□□ -1.17
CDK5RAP3-225ENST00000582482 TRBV6-5A0A0K0K1A5 114 aa7.72□□□□□ -1.17
CDK5RAP3-225ENST00000582482 SRSF9Q13242 221 aaKnown RBP eCLIP7.72□□□□□ -1.17
CDK5RAP3-225ENST00000582482 FABP2P12104 132 aa7.72□□□□□ -1.17
CDK5RAP3-225ENST00000582482 SAMD13Q5VXD3 122 aa7.72□□□□□ -1.17
CDK5RAP3-225ENST00000582482 Q6ZUT4 128 aa7.72□□□□□ -1.17
CDK5RAP3-225ENST00000582482 AMELXQ99217 191 aa7.72□□□□□ -1.17
CDK5RAP3-225ENST00000582482 LOC100131303A0A0U1RQF7 123 aa7.71□□□□□ -1.17
CDK5RAP3-225ENST00000582482 M0R2P5 195 aa7.71□□□□□ -1.17
CDK5RAP3-225ENST00000582482 EIF4EBP3O60516 100 aaPredicted RBP7.71□□□□□ -1.17
CDK5RAP3-225ENST00000582482 ZNF22P17026 224 aaPredicted RBP7.71□□□□□ -1.17
CDK5RAP3-225ENST00000582482 KRTAP10-3P60369 221 aa7.71□□□□□ -1.17
CDK5RAP3-225ENST00000582482 WFDC2Q14508 124 aa7.71□□□□□ -1.17
CDK5RAP3-225ENST00000582482 STHQ8IWL8 128 aa7.71□□□□□ -1.17
CDK5RAP3-225ENST00000582482 TNFRSF18Q9Y5U5 241 aa7.71□□□□□ -1.17
CDK5RAP3-225ENST00000582482 A0A0J9YY99 117 aa7.71□□□□□ -1.18
CDK5RAP3-225ENST00000582482 LINC01549A6NIU2 74 aa7.71□□□□□ -1.18
CDK5RAP3-225ENST00000582482 H7C2G1 150 aa7.71□□□□□ -1.18
CDK5RAP3-225ENST00000582482 PPP1R17O96001 155 aa7.71□□□□□ -1.18
CDK5RAP3-225ENST00000582482 SH2D6Q7Z4S9 175 aa7.71□□□□□ -1.18
CDK5RAP3-225ENST00000582482 GIG44P09565 113 aaPredicted RBP7.7□□□□□ -1.18
CDK5RAP3-225ENST00000582482 LINC00694P0DN24 101 aa7.7□□□□□ -1.18
CDK5RAP3-225ENST00000582482 TIMM17AQ99595 171 aa7.7□□□□□ -1.18
CDK5RAP3-225ENST00000582482 CHCHD7Q9BUK0 85 aa7.7□□□□□ -1.18
CDK5RAP3-225ENST00000582482 TEP1Q99973 2627 aaKnown RBP7.7□□□□□ -1.18
CDK5RAP3-225ENST00000582482 INSP01308 110 aa7.7□□□□□ -1.18
CDK5RAP3-225ENST00000582482 SPINK8P0C7L1 97 aa7.7□□□□□ -1.18
CDK5RAP3-225ENST00000582482 RPL24P83731 157 aaKnown RBP7.7□□□□□ -1.18
CDK5RAP3-225ENST00000582482 ZNF415Q09FC8 603 aa7.7□□□□□ -1.18
CDK5RAP3-225ENST00000582482 VPS25Q9BRG1 176 aa7.7□□□□□ -1.18
CDK5RAP3-225ENST00000582482 NOP10Q9NPE3 64 aaKnown RBP7.7□□□□□ -1.18
CDK5RAP3-225ENST00000582482 FLNBO75369 2602 aaKnown RBP7.69□□□□□ -1.18
CDK5RAP3-225ENST00000582482 J3QQQ9 107 aa7.69□□□□□ -1.18
CDK5RAP3-225ENST00000582482 TNP2Q05952 138 aa7.69□□□□□ -1.18
CDK5RAP3-225ENST00000582482 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.69□□□□□ -1.18
CDK5RAP3-225ENST00000582482 DAND5Q8N907 189 aa7.69□□□□□ -1.18
CDK5RAP3-225ENST00000582482 VCX2Q9H322 139 aa7.69□□□□□ -1.18
CDK5RAP3-225ENST00000582482 GTF2H5Q6ZYL4 71 aa7.69□□□□□ -1.18
CDK5RAP3-225ENST00000582482 TMEM141Q96I45 108 aa7.69□□□□□ -1.18
CDK5RAP3-225ENST00000582482 TMEM223A0PJW6 202 aa7.68□□□□□ -1.18
CDK5RAP3-225ENST00000582482 RHODO00212 210 aa7.68□□□□□ -1.18
CDK5RAP3-225ENST00000582482 INSL3P51460 131 aa7.68□□□□□ -1.18
CDK5RAP3-225ENST00000582482 RPL32P62910 135 aaKnown RBP7.68□□□□□ -1.18
CDK5RAP3-225ENST00000582482 FHL3Q13643 280 aa7.68□□□□□ -1.18
CDK5RAP3-225ENST00000582482 C10orf126Q8N4M7 172 aa7.68□□□□□ -1.18
CDK5RAP3-225ENST00000582482 LOC107984156A0A0G2JMH3 177 aa7.68□□□□□ -1.18
CDK5RAP3-225ENST00000582482 A0A0U1RRA0 63 aa7.68□□□□□ -1.18
CDK5RAP3-225ENST00000582482 TEX48A0A1B0GUV7 120 aa7.68□□□□□ -1.18
CDK5RAP3-225ENST00000582482 A8MTW9 85 aa7.68□□□□□ -1.18
CDK5RAP3-225ENST00000582482 ARL17AQ8IVW1 177 aa7.68□□□□□ -1.18
CDK5RAP3-225ENST00000582482 GAGE12JA6NER3 117 aa7.67□□□□□ -1.18
CDK5RAP3-225ENST00000582482 GAGE7O76087 117 aa7.67□□□□□ -1.18
CDK5RAP3-225ENST00000582482 TSPAN13O95857 204 aa7.67□□□□□ -1.18
CDK5RAP3-225ENST00000582482 GAGE12FP0CL80 117 aa7.67□□□□□ -1.18
CDK5RAP3-225ENST00000582482 GAGE12GP0CL81 117 aa7.67□□□□□ -1.18
CDK5RAP3-225ENST00000582482 GAGE12IP0CL82 117 aa7.67□□□□□ -1.18
CDK5RAP3-225ENST00000582482 LGALS3P17931 250 aaKnown RBP7.67□□□□□ -1.18
CDK5RAP3-225ENST00000582482 COX6A2Q02221 97 aa7.67□□□□□ -1.18
CDK5RAP3-225ENST00000582482 GAGE4Q13068 117 aa7.67□□□□□ -1.18
CDK5RAP3-225ENST00000582482 GAGE5Q13069 117 aa7.67□□□□□ -1.18
CDK5RAP3-225ENST00000582482 RRN3P1Q2M238 152 aa7.67□□□□□ -1.18
CDK5RAP3-225ENST00000582482 GAGE13Q4V321 117 aa7.67□□□□□ -1.18
CDK5RAP3-225ENST00000582482 RHOHQ15669 191 aa7.67□□□□□ -1.18
CDK5RAP3-225ENST00000582482 ZNF625Q96I27 306 aaPredicted RBP7.67□□□□□ -1.18
CDK5RAP3-225ENST00000582482 J3QKU1 62 aa7.66□□□□□ -1.18
CDK5RAP3-225ENST00000582482 PTH2Q96A98 100 aa7.66□□□□□ -1.18
CDK5RAP3-225ENST00000582482 UBE2D4Q9Y2X8 147 aa7.66□□□□□ -1.18
CDK5RAP3-225ENST00000582482 PKD1L1Q8TDX9 2849 aa7.66□□□□□ -1.18
CDK5RAP3-225ENST00000582482 A8MWV9 139 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms