RNA–Protein interactions for RNA: ENST00000581394.1

TTC39C-207, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 3

Gene TTC39C, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-207ENST00000581394 CATR1Q13166 79 aa0.09□□□□□ -2.4
TTC39C-207ENST00000581394 C10orf128Q5T292 105 aa0.09□□□□□ -2.4
TTC39C-207ENST00000581394 SSBP3-AS1Q7Z2R9 100 aa0.09□□□□□ -2.4
TTC39C-207ENST00000581394 BAGE3Q86Y29 109 aa0.09□□□□□ -2.4
TTC39C-207ENST00000581394 COPS9Q8WXC6 57 aa0.09□□□□□ -2.4
TTC39C-207ENST00000581394 TSLPQ969D9 159 aa0.09□□□□□ -2.4
TTC39C-207ENST00000581394 C2orf88Q9BSF0 95 aa0.09□□□□□ -2.4
TTC39C-207ENST00000581394 LINC00472Q9H8W2 130 aa0.09□□□□□ -2.4
TTC39C-207ENST00000581394 SYNE2Q8WXH0 6885 aaKnown RBP0.08□□□□□ -2.4
TTC39C-207ENST00000581394 ARAP2Q8WZ64 1704 aa0.08□□□□□ -2.4
TTC39C-207ENST00000581394 FSIP2Q5CZC0 6907 aa0.08□□□□□ -2.4
TTC39C-207ENST00000581394 CPSF1Q10570 1443 aaKnown RBP0.08□□□□□ -2.4
TTC39C-207ENST00000581394 ZNF815PA8K554 130 aa0.08□□□□□ -2.4
TTC39C-207ENST00000581394 M0R135 149 aa0.08□□□□□ -2.4
TTC39C-207ENST00000581394 C5orf38Q86SI9 138 aa0.08□□□□□ -2.4
TTC39C-207ENST00000581394 NDUFA4L2Q9NRX3 87 aa0.08□□□□□ -2.4
TTC39C-207ENST00000581394 SCP2D1Q9UJQ7 156 aa0.08□□□□□ -2.4
TTC39C-207ENST00000581394 LENEPQ9Y5L5 61 aa0.08□□□□□ -2.4
TTC39C-207ENST00000581394 CSMD3Q7Z407 3707 aa0.08□□□□□ -2.4
TTC39C-207ENST00000581394 IFT172Q9UG01 1749 aa0.07□□□□□ -2.4
TTC39C-207ENST00000581394 PPIP5K1Q6PFW1 1433 aa0.07□□□□□ -2.4
TTC39C-207ENST00000581394 LAMC1P11047 1609 aa0.07□□□□□ -2.4
TTC39C-207ENST00000581394 TNFP01375 233 aa0.07□□□□□ -2.4
TTC39C-207ENST00000581394 APOC2P02655 101 aa0.07□□□□□ -2.4
TTC39C-207ENST00000581394 CFAP126Q5VTH2 177 aa0.07□□□□□ -2.4
TTC39C-207ENST00000581394 TTC9CQ8N5M4 171 aa0.07□□□□□ -2.4
TTC39C-207ENST00000581394 PPP3R2Q96LZ3 170 aa0.07□□□□□ -2.4
TTC39C-207ENST00000581394 PARP14Q460N5 1801 aa0.07□□□□□ -2.4
TTC39C-207ENST00000581394 FAM208BQ5VWN6 2430 aa0.07□□□□□ -2.4
TTC39C-207ENST00000581394 CELSR2Q9HCU4 2923 aa0.07□□□□□ -2.4
TTC39C-207ENST00000581394 SPEF2Q9C093 1822 aa0.06□□□□□ -2.4
TTC39C-207ENST00000581394 DOCK1Q14185 1865 aa0.06□□□□□ -2.4
TTC39C-207ENST00000581394 ROBO1Q9Y6N7 1651 aa0.06□□□□□ -2.4
TTC39C-207ENST00000581394 TRBV7-3A0A075B6L6 115 aa0.06□□□□□ -2.4
TTC39C-207ENST00000581394 COX6A2Q02221 97 aa0.06□□□□□ -2.4
TTC39C-207ENST00000581394 Q5BKY6 102 aa0.06□□□□□ -2.4
TTC39C-207ENST00000581394 COMMD6Q7Z4G1 85 aa0.06□□□□□ -2.4
TTC39C-207ENST00000581394 CYP4F30PQ9H0H9 118 aa0.06□□□□□ -2.4
TTC39C-207ENST00000581394 PRDM2Q13029 1718 aa0.06□□□□□ -2.4
TTC39C-207ENST00000581394 NCOA3Q9Y6Q9 1424 aa0.05□□□□□ -2.4
TTC39C-207ENST00000581394 IGF2RP11717 2491 aa0.05□□□□□ -2.4
TTC39C-207ENST00000581394 CORTO00230 105 aa0.05□□□□□ -2.4
TTC39C-207ENST00000581394 SPAG11BQ08648 103 aa0.05□□□□□ -2.4
TTC39C-207ENST00000581394 SPAG11AQ6PDA7 123 aa0.05□□□□□ -2.4
TTC39C-207ENST00000581394 UBE2DNLQ8IWF7 75 aa0.05□□□□□ -2.4
TTC39C-207ENST00000581394 AQP10Q96PS8 301 aa0.05□□□□□ -2.4
TTC39C-207ENST00000581394 DPH3P1Q9H4G8 78 aa0.05□□□□□ -2.4
TTC39C-207ENST00000581394 IER3IP1Q9Y5U9 82 aa0.05□□□□□ -2.4
TTC39C-207ENST00000581394 R4GMQ9 66 aa0.05□□□□□ -2.4
TTC39C-207ENST00000581394 SPTBN2O15020 2390 aa0.05□□□□□ -2.4
TTC39C-207ENST00000581394 SHROOM2Q13796 1616 aa0.05□□□□□ -2.4
TTC39C-207ENST00000581394 CACNA1CQ13936 2221 aa0.05□□□□□ -2.4
TTC39C-207ENST00000581394 NAIPQ13075 1403 aa0.04□□□□□ -2.4
TTC39C-207ENST00000581394 NWD2Q9ULI1 1742 aa0.04□□□□□ -2.4
TTC39C-207ENST00000581394 PIN1P1O15428 100 aa0.04□□□□□ -2.4
TTC39C-207ENST00000581394 C8orf59Q8N0T1 100 aaPredicted RBP0.04□□□□□ -2.4
TTC39C-207ENST00000581394 OTOGQ6ZRI0 2925 aa0.04□□□□□ -2.4
TTC39C-207ENST00000581394 PTPRZ1P23471 2315 aaPredicted RBP0.04□□□□□ -2.4
TTC39C-207ENST00000581394 NALCNQ8IZF0 1738 aa0.04□□□□□ -2.4
TTC39C-207ENST00000581394 PATJQ8NI35 1801 aa0.03□□□□□ -2.4
TTC39C-207ENST00000581394 MYOM2P54296 1465 aa0.03□□□□□ -2.4
TTC39C-207ENST00000581394 HIVEP3Q5T1R4 2406 aa0.03□□□□□ -2.4
TTC39C-207ENST00000581394 C10orf142B7Z368 130 aa0.03□□□□□ -2.4
TTC39C-207ENST00000581394 SSSCA1O60232 199 aa0.03□□□□□ -2.4
TTC39C-207ENST00000581394 BCE1O60756 84 aa0.03□□□□□ -2.4
TTC39C-207ENST00000581394 C9orf153Q5TBE3 101 aa0.03□□□□□ -2.4
TTC39C-207ENST00000581394 MRPL54Q6P161 138 aaKnown RBP0.03□□□□□ -2.4
TTC39C-207ENST00000581394 MGST2Q99735 147 aa0.03□□□□□ -2.4
TTC39C-207ENST00000581394 V9GYH0 126 aa0.03□□□□□ -2.4
TTC39C-207ENST00000581394 CELSR1Q9NYQ6 3014 aa0.03□□□□□ -2.4
TTC39C-207ENST00000581394 ZNF236Q9UL36 1845 aa0.03□□□□□ -2.4
TTC39C-207ENST00000581394 ZNF609O15014 1411 aa0.03□□□□□ -2.41
TTC39C-207ENST00000581394 HRNRQ86YZ3 2850 aaPredicted RBP0.03□□□□□ -2.41
TTC39C-207ENST00000581394 NCOR2Q9Y618 2525 aa0.03□□□□□ -2.41
TTC39C-207ENST00000581394 SSPOA2VEC9 5147 aa0.02□□□□□ -2.41
TTC39C-207ENST00000581394 MACF1Q9UPN3 7388 aaKnown RBP0.02□□□□□ -2.41
TTC39C-207ENST00000581394 C2CD3Q4AC94 2353 aa0.02□□□□□ -2.41
TTC39C-207ENST00000581394 PIGBOS1A0A0B4J2F0 54 aa0.02□□□□□ -2.41
TTC39C-207ENST00000581394 CTXND1A0A1B0GTU2 59 aa0.02□□□□□ -2.41
TTC39C-207ENST00000581394 IGLC7A0M8Q6 106 aa0.02□□□□□ -2.41
TTC39C-207ENST00000581394 F6UZH7 168 aa0.02□□□□□ -2.41
TTC39C-207ENST00000581394 HMGN4O00479 90 aa0.02□□□□□ -2.41
TTC39C-207ENST00000581394 CNFNQ9BYD5 112 aa0.02□□□□□ -2.41
TTC39C-207ENST00000581394 LINC01558Q9Y6Z2 57 aa0.02□□□□□ -2.41
TTC39C-207ENST00000581394 C10orf71Q711Q0 1435 aa0.02□□□□□ -2.41
TTC39C-207ENST00000581394 DMBT1Q9UGM3 2413 aaPredicted RBP0.02□□□□□ -2.41
TTC39C-207ENST00000581394 RIMS1Q86UR5 1692 aaKnown RBP0.02□□□□□ -2.41
TTC39C-207ENST00000581394 UNC79Q9P2D8 2635 aa0.01□□□□□ -2.41
TTC39C-207ENST00000581394 MYH7P12883 1935 aa0.01□□□□□ -2.41
TTC39C-207ENST00000581394 PI4KAP42356 2102 aa0.01□□□□□ -2.41
TTC39C-207ENST00000581394 F8VRH5 84 aa0.01□□□□□ -2.41
TTC39C-207ENST00000581394 I3L2K1 104 aa0.01□□□□□ -2.41
TTC39C-207ENST00000581394 SNAPC5O75971 98 aa0.01□□□□□ -2.41
TTC39C-207ENST00000581394 IFNGP01579 166 aa0.01□□□□□ -2.41
TTC39C-207ENST00000581394 SPINK8P0C7L1 97 aa0.01□□□□□ -2.41
TTC39C-207ENST00000581394 TPPP2P59282 170 aa0.01□□□□□ -2.41
TTC39C-207ENST00000581394 DYNLRB1Q9NP97 96 aa0.01□□□□□ -2.41
TTC39C-207ENST00000581394 CDC42SE2Q9NRR3 84 aa0.01□□□□□ -2.41
TTC39C-207ENST00000581394 IGSF10Q6WRI0 2623 aa0.01□□□□□ -2.41
TTC39C-207ENST00000581394 KTN1Q86UP2 1357 aaKnown RBP0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms