RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 C20orf166-AS1Q96NR2 134 aa2.56□□□□□ -2
SMG8-205ENST00000580798 AGLP35573 1532 aa2.56□□□□□ -2
SMG8-205ENST00000580798 CEP170BQ9Y4F5 1589 aaPredicted RBP2.56□□□□□ -2
SMG8-205ENST00000580798 EIF2AK4Q9P2K8 1649 aaKnown RBP2.56□□□□□ -2
SMG8-205ENST00000580798 ALS2Q96Q42 1657 aa2.56□□□□□ -2
SMG8-205ENST00000580798 MYO5AQ9Y4I1 1855 aaKnown RBP2.56□□□□□ -2
SMG8-205ENST00000580798 LOC101927531A0A1B0GV80 90 aa2.55□□□□□ -2
SMG8-205ENST00000580798 A0A1W2PPR1 153 aa2.55□□□□□ -2
SMG8-205ENST00000580798 HCRTO43612 131 aa2.55□□□□□ -2
SMG8-205ENST00000580798 TFF1P04155 84 aa2.55□□□□□ -2
SMG8-205ENST00000580798 COL4A4P53420 1690 aaPredicted RBP2.55□□□□□ -2
SMG8-205ENST00000580798 ERHP84090 104 aaKnown RBP2.55□□□□□ -2
SMG8-205ENST00000580798 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.55□□□□□ -2
SMG8-205ENST00000580798 UBALD1Q8TB05 177 aa2.55□□□□□ -2
SMG8-205ENST00000580798 KLF14Q8TD94 323 aaPredicted RBP2.55□□□□□ -2
SMG8-205ENST00000580798 ORMDL1Q9P0S3 153 aa2.55□□□□□ -2
SMG8-205ENST00000580798 LENEPQ9Y5L5 61 aa2.55□□□□□ -2
SMG8-205ENST00000580798 MINOS1-NBL1R4GNA1 71 aa2.55□□□□□ -2
SMG8-205ENST00000580798 TANC2Q9HCD6 1990 aa2.54□□□□□ -2
SMG8-205ENST00000580798 PLXNB3Q9ULL4 1909 aa2.54□□□□□ -2
SMG8-205ENST00000580798 ABCA5Q8WWZ7 1642 aa2.54□□□□□ -2
SMG8-205ENST00000580798 TRBV30A0A0K0K1B3 111 aa2.54□□□□□ -2
SMG8-205ENST00000580798 HMGN4O00479 90 aa2.54□□□□□ -2
SMG8-205ENST00000580798 PSCAO43653 123 aa2.54□□□□□ -2
SMG8-205ENST00000580798 DNAL4O96015 105 aa2.54□□□□□ -2
SMG8-205ENST00000580798 IGHV3-33P01772 117 aa2.54□□□□□ -2
SMG8-205ENST00000580798 EIF4EBP1Q13541 118 aaPredicted RBP2.54□□□□□ -2
SMG8-205ENST00000580798 C4orf3Q8WVX3 66 aa2.54□□□□□ -2
SMG8-205ENST00000580798 DMAC1Q96GE9 116 aa2.54□□□□□ -2
SMG8-205ENST00000580798 RNF5Q99942 180 aa2.54□□□□□ -2
SMG8-205ENST00000580798 NDUFA4L2Q9NRX3 87 aa2.54□□□□□ -2
SMG8-205ENST00000580798 DSCAMO60469 2012 aa2.54□□□□□ -2
SMG8-205ENST00000580798 PTPRBP23467 1997 aa2.54□□□□□ -2
SMG8-205ENST00000580798 SCN8AQ9UQD0 1980 aa2.54□□□□□ -2
SMG8-205ENST00000580798 ZNF646O15015 1829 aaPredicted RBP2.54□□□□□ -2
SMG8-205ENST00000580798 SIPA1L3O60292 1781 aaPredicted RBP2.54□□□□□ -2
SMG8-205ENST00000580798 USP32Q8NFA0 1604 aa2.53□□□□□ -2
SMG8-205ENST00000580798 CICQ96RK0 1608 aaPredicted RBP2.53□□□□□ -2
SMG8-205ENST00000580798 CDC42BPGQ6DT37 1551 aa2.53□□□□□ -2
SMG8-205ENST00000580798 TRAV1-2A0A0B4J238 106 aa2.53□□□□□ -2
SMG8-205ENST00000580798 TRAV12-1A0A0B4J245 112 aa2.53□□□□□ -2
SMG8-205ENST00000580798 PPP1R17O96001 155 aa2.53□□□□□ -2
SMG8-205ENST00000580798 PPYP01298 95 aa2.53□□□□□ -2
SMG8-205ENST00000580798 IGKV3-15P01624 115 aa2.53□□□□□ -2
SMG8-205ENST00000580798 SNRPGP62308 76 aaKnown RBP2.53□□□□□ -2
SMG8-205ENST00000580798 SERF2P84101 59 aa2.53□□□□□ -2
SMG8-205ENST00000580798 SPAG11BQ08648 103 aa2.53□□□□□ -2
SMG8-205ENST00000580798 DEFB116Q30KQ4 102 aa2.53□□□□□ -2
SMG8-205ENST00000580798 SPAG11AQ6PDA7 123 aa2.53□□□□□ -2
SMG8-205ENST00000580798 Q86TA4 180 aa2.53□□□□□ -2
SMG8-205ENST00000580798 LYPD1Q8N2G4 141 aa2.53□□□□□ -2
SMG8-205ENST00000580798 Q8TAT8 98 aa2.53□□□□□ -2
SMG8-205ENST00000580798 AMELXQ99217 191 aa2.53□□□□□ -2
SMG8-205ENST00000580798 PROK2Q9HC23 129 aa2.53□□□□□ -2
SMG8-205ENST00000580798 ARFGEF2Q9Y6D5 1785 aa2.53□□□□□ -2
SMG8-205ENST00000580798 COL5A3P25940 1745 aaPredicted RBP2.53□□□□□ -2
SMG8-205ENST00000580798 PDCD11Q14690 1871 aaKnown RBP2.52□□□□□ -2.01
SMG8-205ENST00000580798 PLXNA1Q9UIW2 1896 aa2.52□□□□□ -2.01
SMG8-205ENST00000580798 IGKV3D-11A0A0A0MRZ8 115 aa2.52□□□□□ -2.01
SMG8-205ENST00000580798 TRBV6-6A0A0A6YYG2 114 aa2.52□□□□□ -2.01
SMG8-205ENST00000580798 ODF3BA8MYP8 253 aa2.52□□□□□ -2.01
SMG8-205ENST00000580798 PANO1I0J062 215 aa2.52□□□□□ -2.01
SMG8-205ENST00000580798 NDUFB1O75438 58 aa2.52□□□□□ -2.01
SMG8-205ENST00000580798 DEFB113Q30KQ7 82 aa2.52□□□□□ -2.01
SMG8-205ENST00000580798 C1orf137Q5JT78 98 aa2.52□□□□□ -2.01
SMG8-205ENST00000580798 PRR15LQ9BU68 103 aa2.52□□□□□ -2.01
SMG8-205ENST00000580798 MRPL36Q9P0J6 103 aaKnown RBP2.52□□□□□ -2.01
SMG8-205ENST00000580798 USP54Q70EL1 1684 aa2.52□□□□□ -2.01
SMG8-205ENST00000580798 LTBP4Q8N2S1 1624 aa2.52□□□□□ -2.01
SMG8-205ENST00000580798 SLIT2O94813 1529 aa2.52□□□□□ -2.01
SMG8-205ENST00000580798 TOP2BQ02880 1626 aa2.51□□□□□ -2.01
SMG8-205ENST00000580798 IGHV3OR16-8A0A075B7F1 116 aa2.51□□□□□ -2.01
SMG8-205ENST00000580798 A0A0J9YX75 114 aa2.51□□□□□ -2.01
SMG8-205ENST00000580798 A0A1B0GUT8 65 aa2.51□□□□□ -2.01
SMG8-205ENST00000580798 IFI6P09912 130 aa2.51□□□□□ -2.01
SMG8-205ENST00000580798 C9orf129Q5T035 196 aaKnown RBP2.51□□□□□ -2.01
SMG8-205ENST00000580798 ZNF833PQ6ZTB9 187 aa2.51□□□□□ -2.01
SMG8-205ENST00000580798 ZNF563Q8TA94 476 aa2.51□□□□□ -2.01
SMG8-205ENST00000580798 HIGD2AQ9BW72 106 aa2.51□□□□□ -2.01
SMG8-205ENST00000580798 R4GMQ9 66 aa2.51□□□□□ -2.01
SMG8-205ENST00000580798 ATP7AQ04656 1500 aa2.51□□□□□ -2.01
SMG8-205ENST00000580798 ZFC3H1O60293 1989 aaKnown RBP2.5□□□□□ -2.01
SMG8-205ENST00000580798 ABCA7Q8IZY2 2146 aa2.5□□□□□ -2.01
SMG8-205ENST00000580798 AFDNP55196 1824 aaKnown RBP2.5□□□□□ -2.01
SMG8-205ENST00000580798 A0A0J9YY99 117 aa2.5□□□□□ -2.01
SMG8-205ENST00000580798 A0A1B0GU33 70 aa2.5□□□□□ -2.01
SMG8-205ENST00000580798 IGLV1-47P01700 117 aa2.5□□□□□ -2.01
SMG8-205ENST00000580798 IGHV3-30P01768 117 aa2.5□□□□□ -2.01
SMG8-205ENST00000580798 IGHV3-30-5P0DP03 117 aa2.5□□□□□ -2.01
SMG8-205ENST00000580798 S100A3P33764 101 aa2.5□□□□□ -2.01
SMG8-205ENST00000580798 LINC00483Q53H64 154 aa2.5□□□□□ -2.01
SMG8-205ENST00000580798 LYPD6Q86Y78 171 aa2.5□□□□□ -2.01
SMG8-205ENST00000580798 Q8NAQ8 132 aa2.5□□□□□ -2.01
SMG8-205ENST00000580798 WFDC6Q9BQY6 131 aa2.5□□□□□ -2.01
SMG8-205ENST00000580798 SNURFQ9Y675 71 aa2.5□□□□□ -2.01
SMG8-205ENST00000580798 STRCP1A6NGW2 1772 aa2.5□□□□□ -2.01
SMG8-205ENST00000580798 TRPM6Q9BX84 2022 aa2.5□□□□□ -2.01
SMG8-205ENST00000580798 NYNRINQ9P2P1 1898 aaKnown RBP2.5□□□□□ -2.01
SMG8-205ENST00000580798 CLTCL1P53675 1640 aa2.5□□□□□ -2.01
SMG8-205ENST00000580798 EXPH5Q8NEV8 1989 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms