RNA–Protein interactions for RNA: ENST00000579662.5

ITGB4-206, Transcript of integrin subunit beta 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGB4, Length 5,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-206ENST00000579662 CEMP1Q6PRD7 247 aaPredicted RBP11.36□□□□□ -0.59
ITGB4-206ENST00000579662 NEXN-AS1Q8NBZ9 246 aa11.36□□□□□ -0.59
ITGB4-206ENST00000579662 U3KQK5 164 aa11.36□□□□□ -0.59
ITGB4-206ENST00000579662 TRBV10-2A0A0K0K1G8 114 aa11.36□□□□□ -0.59
ITGB4-206ENST00000579662 RS1O15537 224 aa11.36□□□□□ -0.59
ITGB4-206ENST00000579662 UFSP1Q6NVU6 142 aa11.36□□□□□ -0.59
ITGB4-206ENST00000579662 IGLV1-40P01703 118 aa11.35□□□□□ -0.59
ITGB4-206ENST00000579662 TAX1BP3O14907 124 aa11.35□□□□□ -0.59
ITGB4-206ENST00000579662 CFAP126Q5VTH2 177 aa11.35□□□□□ -0.59
ITGB4-206ENST00000579662 TRBV6-4A0A1B0GX49 114 aa11.35□□□□□ -0.59
ITGB4-206ENST00000579662 LY6G6DO95868 133 aa11.35□□□□□ -0.59
ITGB4-206ENST00000579662 CRIP1P50238 77 aa11.34□□□□□ -0.59
ITGB4-206ENST00000579662 LECT2O14960 151 aa11.34□□□□□ -0.59
ITGB4-206ENST00000579662 LINC00467Q9BRT7 94 aa11.34□□□□□ -0.59
ITGB4-206ENST00000579662 LINC00269Q8N2A0 174 aa11.33□□□□□ -0.6
ITGB4-206ENST00000579662 M0QY20 66 aa11.33□□□□□ -0.6
ITGB4-206ENST00000579662 IGLV2-11P01706 119 aa11.33□□□□□ -0.6
ITGB4-206ENST00000579662 PTPRQQ9UMZ3 2332 aa11.33□□□□□ -0.6
ITGB4-206ENST00000579662 NDUFB1O75438 58 aa11.33□□□□□ -0.6
ITGB4-206ENST00000579662 A0A0J9YXY3 114 aa11.33□□□□□ -0.6
ITGB4-206ENST00000579662 NDUFS5O43920 106 aa11.33□□□□□ -0.6
ITGB4-206ENST00000579662 C10orf99Q6UWK7 81 aa11.33□□□□□ -0.6
ITGB4-206ENST00000579662 PLCE1Q9P212 2302 aa11.32□□□□□ -0.6
ITGB4-206ENST00000579662 BDP1A6H8Y1 2624 aa11.32□□□□□ -0.6
ITGB4-206ENST00000579662 TMEM256-PLSCR3K7ERE1 68 aa11.32□□□□□ -0.6
ITGB4-206ENST00000579662 COL5A1P20908 1838 aaPredicted RBP11.32□□□□□ -0.6
ITGB4-206ENST00000579662 LINC01006Q8NI28 216 aa11.32□□□□□ -0.6
ITGB4-206ENST00000579662 TRBV6-5A0A0K0K1A5 114 aa11.31□□□□□ -0.6
ITGB4-206ENST00000579662 COX7BP24311 80 aa11.31□□□□□ -0.6
ITGB4-206ENST00000579662 CHCHD10Q8WYQ3 142 aaPredicted RBP11.31□□□□□ -0.6
ITGB4-206ENST00000579662 DEFB131BA0A096LNP1 70 aa11.31□□□□□ -0.6
ITGB4-206ENST00000579662 PDE6GP18545 87 aa11.31□□□□□ -0.6
ITGB4-206ENST00000579662 NREPQ16612 68 aa11.31□□□□□ -0.6
ITGB4-206ENST00000579662 HIVEP2P31629 2446 aa11.31□□□□□ -0.6
ITGB4-206ENST00000579662 PCNX3Q9H6A9 2034 aa11.31□□□□□ -0.6
ITGB4-206ENST00000579662 IGLV4-3A0A075B6K6 122 aa11.31□□□□□ -0.6
ITGB4-206ENST00000579662 RNF185Q96GF1 192 aa11.31□□□□□ -0.6
ITGB4-206ENST00000579662 OTOGLQ3ZCN5 2332 aa11.3□□□□□ -0.6
ITGB4-206ENST00000579662 TMEM223A0PJW6 202 aa11.3□□□□□ -0.6
ITGB4-206ENST00000579662 CLEC2BQ92478 149 aa11.3□□□□□ -0.6
ITGB4-206ENST00000579662 TRBV6-8A0A0A6YYG3 113 aa11.3□□□□□ -0.6
ITGB4-206ENST00000579662 ACACBO00763 2458 aa11.29□□□□□ -0.6
ITGB4-206ENST00000579662 KLLNB2CW77 178 aa11.29□□□□□ -0.6
ITGB4-206ENST00000579662 RBM3P98179 157 aaKnown RBP11.29□□□□□ -0.6
ITGB4-206ENST00000579662 PYGO1Q9Y3Y4 419 aa11.29□□□□□ -0.6
ITGB4-206ENST00000579662 TRBV27A0A0K0K1C4 114 aa11.28□□□□□ -0.6
ITGB4-206ENST00000579662 ZNF22P17026 224 aaPredicted RBP11.28□□□□□ -0.6
ITGB4-206ENST00000579662 CRYGDP07320 174 aa11.28□□□□□ -0.6
ITGB4-206ENST00000579662 HIST2H2BDQ6DRA6 164 aa11.28□□□□□ -0.6
ITGB4-206ENST00000579662 B9D2Q9BPU9 175 aa11.28□□□□□ -0.6
ITGB4-206ENST00000579662 PLA2G2AP14555 144 aa11.27□□□□□ -0.6
ITGB4-206ENST00000579662 CDSNQ15517 529 aa11.27□□□□□ -0.6
ITGB4-206ENST00000579662 HIGD2BQ4VC39 106 aa11.27□□□□□ -0.6
ITGB4-206ENST00000579662 YPEL4Q96NS1 127 aa11.27□□□□□ -0.6
ITGB4-206ENST00000579662 SPANXB1Q9NS25 103 aaPredicted RBP11.27□□□□□ -0.6
ITGB4-206ENST00000579662 FOXI1Q12951 378 aa11.27□□□□□ -0.61
ITGB4-206ENST00000579662 WFDC2Q14508 124 aa11.27□□□□□ -0.61
ITGB4-206ENST00000579662 ARHGAP21Q5T5U3 1957 aa11.27□□□□□ -0.61
ITGB4-206ENST00000579662 IBA57-AS1B1ANH7 110 aa11.27□□□□□ -0.61
ITGB4-206ENST00000579662 KIR2DL5BQ8NHK3 375 aa11.27□□□□□ -0.61
ITGB4-206ENST00000579662 CDKN2A-AS1Q9UH64 79 aa11.27□□□□□ -0.61
ITGB4-206ENST00000579662 DSCAMO60469 2012 aa11.26□□□□□ -0.61
ITGB4-206ENST00000579662 TNRC6BQ9UPQ9 1833 aaKnown RBP11.26□□□□□ -0.61
ITGB4-206ENST00000579662 LINC00482Q8N8I6 264 aa11.26□□□□□ -0.61
ITGB4-206ENST00000579662 NDUFA7O95182 113 aa11.26□□□□□ -0.61
ITGB4-206ENST00000579662 CUL9Q8IWT3 2517 aa11.26□□□□□ -0.61
ITGB4-206ENST00000579662 IGHV4-28A0A0C4DH34 117 aa11.26□□□□□ -0.61
ITGB4-206ENST00000579662 ATOX1O00244 68 aa11.25□□□□□ -0.61
ITGB4-206ENST00000579662 RNASE3P12724 160 aaKnown RBP11.25□□□□□ -0.61
ITGB4-206ENST00000579662 CRIP2P52943 208 aaPredicted RBP11.25□□□□□ -0.61
ITGB4-206ENST00000579662 PIK3CD-AS1Q5SR53 167 aa11.25□□□□□ -0.61
ITGB4-206ENST00000579662 C9orf85Q96MD7 179 aa11.25□□□□□ -0.61
ITGB4-206ENST00000579662 TRAV10A0A0B4J240 114 aa11.24□□□□□ -0.61
ITGB4-206ENST00000579662 DCANP1Q8TF63 244 aa11.24□□□□□ -0.61
ITGB4-206ENST00000579662 C4orf48Q5BLP8 95 aa11.23□□□□□ -0.61
ITGB4-206ENST00000579662 MP68P56378 58 aa11.23□□□□□ -0.61
ITGB4-206ENST00000579662 SMIM20Q8N5G0 67 aa11.22□□□□□ -0.61
ITGB4-206ENST00000579662 RNF183Q96D59 192 aa11.22□□□□□ -0.61
ITGB4-206ENST00000579662 IGKV3D-7A0A0C4DH55 119 aa11.22□□□□□ -0.61
ITGB4-206ENST00000579662 PRR9Q5T870 116 aa11.22□□□□□ -0.61
ITGB4-206ENST00000579662 Q6ZS46 218 aa11.22□□□□□ -0.61
ITGB4-206ENST00000579662 NRACQ8N912 160 aa11.22□□□□□ -0.61
ITGB4-206ENST00000579662 TSHBP01222 138 aa11.21□□□□□ -0.61
ITGB4-206ENST00000579662 TCL1BO95988 128 aa11.21□□□□□ -0.61
ITGB4-206ENST00000579662 TMEM258P61165 79 aa11.21□□□□□ -0.61
ITGB4-206ENST00000579662 C18orf65Q6ZTR6 163 aa11.21□□□□□ -0.61
ITGB4-206ENST00000579662 A0A1B0GX51 115 aa11.21□□□□□ -0.62
ITGB4-206ENST00000579662 FAM110AQ9BQ89 295 aa11.21□□□□□ -0.62
ITGB4-206ENST00000579662 BRI3O95415 125 aa11.2□□□□□ -0.62
ITGB4-206ENST00000579662 MRGPRG-AS1Q2M3A8 158 aa11.2□□□□□ -0.62
ITGB4-206ENST00000579662 LINC00308Q8TCZ7 52 aa11.2□□□□□ -0.62
ITGB4-206ENST00000579662 C11orf21Q9P2W6 132 aa11.2□□□□□ -0.62
ITGB4-206ENST00000579662 ZNF580Q9UK33 172 aa11.2□□□□□ -0.62
ITGB4-206ENST00000579662 PROK1P58294 105 aa11.2□□□□□ -0.62
ITGB4-206ENST00000579662 BBC3Q96PG8 261 aaPredicted RBP11.2□□□□□ -0.62
ITGB4-206ENST00000579662 NACAE9PAV3 2078 aa11.2□□□□□ -0.62
ITGB4-206ENST00000579662 TIMM17BO60830 172 aa11.19□□□□□ -0.62
ITGB4-206ENST00000579662 IGKV2-24A0A0C4DH68 120 aa11.19□□□□□ -0.62
ITGB4-206ENST00000579662 AVPP01185 164 aa11.19□□□□□ -0.62
ITGB4-206ENST00000579662 MRPS36P82909 103 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms