RNA–Protein interactions for RNA: ENST00000579344.1

CCR7-203, Transcript of C-C motif chemokine receptor 7, humanhuman

TSL 1 (best) BASIC

Gene CCR7, Length 1,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR7-203ENST00000579344 TRBV12-3P01733 135 aa11.66□□□□□ -0.54
CCR7-203ENST00000579344 ATP5J2P56134 94 aa11.66□□□□□ -0.54
CCR7-203ENST00000579344 Q6JHZ5 121 aa11.66□□□□□ -0.54
CCR7-203ENST00000579344 DEFB124Q8NES8 71 aa11.66□□□□□ -0.54
CCR7-203ENST00000579344 CHCHD7Q9BUK0 85 aa11.66□□□□□ -0.54
CCR7-203ENST00000579344 WNK2Q9Y3S1 2297 aa11.65□□□□□ -0.54
CCR7-203ENST00000579344 Q8NA96 180 aa11.65□□□□□ -0.54
CCR7-203ENST00000579344 SERP2Q8N6R1 65 aa11.64□□□□□ -0.55
CCR7-203ENST00000579344 PRRC2AP48634 2157 aaKnown RBP11.64□□□□□ -0.55
CCR7-203ENST00000579344 GVINP1Q7Z2Y8 2422 aa11.64□□□□□ -0.55
CCR7-203ENST00000579344 TRAV25A0A0B4J276 109 aa11.63□□□□□ -0.55
CCR7-203ENST00000579344 LINC01560Q8TB33 94 aa11.63□□□□□ -0.55
CCR7-203ENST00000579344 LY6HO94772 140 aa11.63□□□□□ -0.55
CCR7-203ENST00000579344 OBSCN-AS1Q96MR7 158 aa11.63□□□□□ -0.55
CCR7-203ENST00000579344 IGHG2P01859 326 aa11.62□□□□□ -0.55
CCR7-203ENST00000579344 UPK3BQ9BT76 320 aa11.62□□□□□ -0.55
CCR7-203ENST00000579344 KLK5Q9Y337 293 aaPredicted RBP11.62□□□□□ -0.55
CCR7-203ENST00000579344 CEP250Q9BV73 2442 aa11.62□□□□□ -0.55
CCR7-203ENST00000579344 NPC2P61916 151 aa11.61□□□□□ -0.55
CCR7-203ENST00000579344 DPH3Q96FX2 82 aa11.61□□□□□ -0.55
CCR7-203ENST00000579344 MALP21145 153 aa11.61□□□□□ -0.55
CCR7-203ENST00000579344 RPL28P46779 137 aaKnown RBP11.61□□□□□ -0.55
CCR7-203ENST00000579344 PIMREGQ9BSJ6 248 aa11.61□□□□□ -0.55
CCR7-203ENST00000579344 PRRC2CQ9Y520 2896 aaKnown RBP11.6□□□□□ -0.55
CCR7-203ENST00000579344 HIST2H2BCQ6DN03 193 aa11.59□□□□□ -0.55
CCR7-203ENST00000579344 HIST2H2BDQ6DRA6 164 aa11.59□□□□□ -0.55
CCR7-203ENST00000579344 CDKN2A-AS1Q9UH64 79 aa11.59□□□□□ -0.55
CCR7-203ENST00000579344 hADV29S1A0JD25 119 aa11.59□□□□□ -0.55
CCR7-203ENST00000579344 A8MZ25 164 aa11.59□□□□□ -0.55
CCR7-203ENST00000579344 NDUFC2-KCTD14E9PQ53 114 aa11.59□□□□□ -0.55
CCR7-203ENST00000579344 ABCA4P78363 2273 aa11.59□□□□□ -0.55
CCR7-203ENST00000579344 TRAV13-2A0A0B4J235 113 aa11.58□□□□□ -0.56
CCR7-203ENST00000579344 SNRPD3P62318 126 aaKnown RBP11.58□□□□□ -0.56
CCR7-203ENST00000579344 PRIMA1Q86XR5 153 aa11.58□□□□□ -0.56
CCR7-203ENST00000579344 PTPRZ1P23471 2315 aaPredicted RBP11.58□□□□□ -0.56
CCR7-203ENST00000579344 IGLV1-40P01703 118 aa11.57□□□□□ -0.56
CCR7-203ENST00000579344 NBL1P41271 181 aa11.57□□□□□ -0.56
CCR7-203ENST00000579344 SOSTDC1Q6X4U4 206 aa11.57□□□□□ -0.56
CCR7-203ENST00000579344 Q8N2B8 174 aa11.57□□□□□ -0.56
CCR7-203ENST00000579344 ZNF625Q96I27 306 aaPredicted RBP11.57□□□□□ -0.56
CCR7-203ENST00000579344 Q9H8V8 135 aa11.57□□□□□ -0.56
CCR7-203ENST00000579344 POLEQ07864 2286 aa11.57□□□□□ -0.56
CCR7-203ENST00000579344 K7EQG2 157 aa11.56□□□□□ -0.56
CCR7-203ENST00000579344 FAM218AQ96MZ4 157 aa11.56□□□□□ -0.56
CCR7-203ENST00000579344 UBTD1Q9HAC8 227 aa11.56□□□□□ -0.56
CCR7-203ENST00000579344 DNAL4O96015 105 aa11.55□□□□□ -0.56
CCR7-203ENST00000579344 LINC00467Q9BRT7 94 aa11.55□□□□□ -0.56
CCR7-203ENST00000579344 CFAP47Q6ZTR5 3102 aa11.54□□□□□ -0.56
CCR7-203ENST00000579344 A8MTW9 85 aa11.54□□□□□ -0.56
CCR7-203ENST00000579344 IGKV3-7A0A075B6H7 116 aa11.53□□□□□ -0.56
CCR7-203ENST00000579344 H0YGX0 51 aa11.53□□□□□ -0.56
CCR7-203ENST00000579344 RNASE13Q5GAN3 156 aaKnown RBP11.53□□□□□ -0.56
CCR7-203ENST00000579344 TRAV12-2A0A075B6T6 113 aa11.53□□□□□ -0.56
CCR7-203ENST00000579344 SMIM1B2RUZ4 78 aa11.53□□□□□ -0.56
CCR7-203ENST00000579344 LMO4P61968 165 aa11.53□□□□□ -0.56
CCR7-203ENST00000579344 CFHR3Q02985 330 aa11.53□□□□□ -0.56
CCR7-203ENST00000579344 ATP5EP2Q5VTU8 51 aa11.53□□□□□ -0.56
CCR7-203ENST00000579344 SPTBN2O15020 2390 aa11.52□□□□□ -0.57
CCR7-203ENST00000579344 IGHV3-53P01767 116 aa11.52□□□□□ -0.57
CCR7-203ENST00000579344 LINC00242Q5T6M2 205 aa11.52□□□□□ -0.57
CCR7-203ENST00000579344 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.52□□□□□ -0.57
CCR7-203ENST00000579344 TPRP12270 2363 aaKnown RBP11.51□□□□□ -0.57
CCR7-203ENST00000579344 IGHV3-11P01762 117 aa11.51□□□□□ -0.57
CCR7-203ENST00000579344 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.51□□□□□ -0.57
CCR7-203ENST00000579344 IGHV3OR16-12A0A075B7B8 117 aa11.51□□□□□ -0.57
CCR7-203ENST00000579344 IGKV2-29A2NJV5 120 aaPredicted RBP11.51□□□□□ -0.57
CCR7-203ENST00000579344 NDUFC2O95298 119 aa11.51□□□□□ -0.57
CCR7-203ENST00000579344 SPINK13Q1W4C9 94 aa11.51□□□□□ -0.57
CCR7-203ENST00000579344 MRAPQ8TCY5 172 aa11.51□□□□□ -0.57
CCR7-203ENST00000579344 CYSTM1Q9H1C7 97 aa11.51□□□□□ -0.57
CCR7-203ENST00000579344 ASPMQ8IZT6 3477 aa11.5□□□□□ -0.57
CCR7-203ENST00000579344 USP17L23D6RBM5 183 aa11.5□□□□□ -0.57
CCR7-203ENST00000579344 K7ENP7 123 aa11.5□□□□□ -0.57
CCR7-203ENST00000579344 DCHS1Q96JQ0 3298 aa11.5□□□□□ -0.57
CCR7-203ENST00000579344 A6NDX4 124 aa11.49□□□□□ -0.57
CCR7-203ENST00000579344 GRNP28799 593 aaKnown RBP11.49□□□□□ -0.57
CCR7-203ENST00000579344 S100A7L2Q5SY68 101 aa11.49□□□□□ -0.57
CCR7-203ENST00000579344 TMEM89A2RUT3 159 aa11.49□□□□□ -0.57
CCR7-203ENST00000579344 CRPP02741 224 aa11.49□□□□□ -0.57
CCR7-203ENST00000579344 COX6A2Q02221 97 aa11.49□□□□□ -0.57
CCR7-203ENST00000579344 LINC01561Q8N1V8 128 aa11.49□□□□□ -0.57
CCR7-203ENST00000579344 F5H768 121 aa11.48□□□□□ -0.57
CCR7-203ENST00000579344 Q5XG85 94 aa11.48□□□□□ -0.57
CCR7-203ENST00000579344 AKAP13Q12802 2813 aa11.48□□□□□ -0.57
CCR7-203ENST00000579344 BCE1O60756 84 aa11.47□□□□□ -0.57
CCR7-203ENST00000579344 LINC00846Q9NV44 126 aa11.47□□□□□ -0.57
CCR7-203ENST00000579344 KALRNO60229 2985 aa11.47□□□□□ -0.57
CCR7-203ENST00000579344 RP1L1Q8IWN7 2480 aaPredicted RBP11.47□□□□□ -0.57
CCR7-203ENST00000579344 TRAV13-1A0A0B4J241 112 aa11.46□□□□□ -0.57
CCR7-203ENST00000579344 SYNJ2BPP57105 145 aa11.46□□□□□ -0.57
CCR7-203ENST00000579344 PROK1P58294 105 aa11.46□□□□□ -0.57
CCR7-203ENST00000579344 KLRB1Q12918 225 aa11.46□□□□□ -0.57
CCR7-203ENST00000579344 DGAT2L7PQ6IED9 249 aa11.46□□□□□ -0.57
CCR7-203ENST00000579344 ZFHX4Q86UP3 3567 aa11.46□□□□□ -0.57
CCR7-203ENST00000579344 EPM2AB3EWF7 344 aa11.46□□□□□ -0.58
CCR7-203ENST00000579344 OXTP01178 125 aa11.46□□□□□ -0.58
CCR7-203ENST00000579344 KIR2DL5BQ8NHK3 375 aa11.46□□□□□ -0.58
CCR7-203ENST00000579344 TRBV10-3A0A0K0K1G6 114 aa11.45□□□□□ -0.58
CCR7-203ENST00000579344 Q6ZSN1 163 aa11.45□□□□□ -0.58
CCR7-203ENST00000579344 RS1O15537 224 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms