RNA–Protein interactions for RNA: ENST00000579122.1

CDKN2A-213, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3 BASIC

Gene CDKN2A, Length 666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-213ENST00000579122 HIGD1CA8MV81 97 aa12.53□□□□□ -0.4
CDKN2A-213ENST00000579122 NUP35Q8NFH5 326 aa12.53□□□□□ -0.4
CDKN2A-213ENST00000579122 UBE2WQ96B02 151 aa12.53□□□□□ -0.4
CDKN2A-213ENST00000579122 SMCO4Q9NRQ5 59 aa12.53□□□□□ -0.4
CDKN2A-213ENST00000579122 A0A087WX48 190 aa12.52□□□□□ -0.41
CDKN2A-213ENST00000579122 S100PP25815 95 aa12.52□□□□□ -0.41
CDKN2A-213ENST00000579122 KCNIP4Q6PIL6 250 aa12.52□□□□□ -0.41
CDKN2A-213ENST00000579122 LYZL1Q6UWQ5 148 aa12.52□□□□□ -0.41
CDKN2A-213ENST00000579122 CBLN2Q8IUK8 224 aa12.52□□□□□ -0.41
CDKN2A-213ENST00000579122 SSBP4Q9BWG4 385 aaPredicted RBP12.52□□□□□ -0.41
CDKN2A-213ENST00000579122 F2Z2F3 143 aa12.51□□□□□ -0.41
CDKN2A-213ENST00000579122 SNAI2O43623 268 aa12.51□□□□□ -0.41
CDKN2A-213ENST00000579122 OR5AL1P0C617 328 aa12.51□□□□□ -0.41
CDKN2A-213ENST00000579122 MUC21A0A0G2JKD1 596 aa12.5□□□□□ -0.41
CDKN2A-213ENST00000579122 MUC21A0A140T8X8 626 aa12.5□□□□□ -0.41
CDKN2A-213ENST00000579122 CTRLP40313 264 aa12.5□□□□□ -0.41
CDKN2A-213ENST00000579122 Q0VG73 95 aa12.5□□□□□ -0.41
CDKN2A-213ENST00000579122 C14orf177Q52M58 125 aa12.5□□□□□ -0.41
CDKN2A-213ENST00000579122 FAM74A4Q5TZK3 123 aa12.5□□□□□ -0.41
CDKN2A-213ENST00000579122 PHLDA3Q9Y5J5 127 aa12.5□□□□□ -0.41
CDKN2A-213ENST00000579122 SSTP61278 116 aa12.49□□□□□ -0.41
CDKN2A-213ENST00000579122 BORCS7Q96B45 105 aa12.49□□□□□ -0.41
CDKN2A-213ENST00000579122 TRBV10-1A0A0K0K1A3 114 aa12.48□□□□□ -0.41
CDKN2A-213ENST00000579122 CACNG7P62955 275 aa12.48□□□□□ -0.41
CDKN2A-213ENST00000579122 WDR73Q6P4I2 378 aa12.48□□□□□ -0.41
CDKN2A-213ENST00000579122 OR10AG1Q8NH19 301 aa12.48□□□□□ -0.41
CDKN2A-213ENST00000579122 BTF3L4Q96K17 158 aa12.48□□□□□ -0.41
CDKN2A-213ENST00000579122 TRAV9-1A0A075B6T8 112 aa12.47□□□□□ -0.41
CDKN2A-213ENST00000579122 A0A087WWL8 130 aa12.47□□□□□ -0.41
CDKN2A-213ENST00000579122 A0A1B0GUT8 65 aa12.47□□□□□ -0.41
CDKN2A-213ENST00000579122 UBE2D3P61077 147 aa12.47□□□□□ -0.41
CDKN2A-213ENST00000579122 UBE2D2P62837 147 aa12.47□□□□□ -0.41
CDKN2A-213ENST00000579122 RPL36AP83881 106 aaKnown RBP12.47□□□□□ -0.41
CDKN2A-213ENST00000579122 SPANXN1Q5VSR9 72 aa12.47□□□□□ -0.41
CDKN2A-213ENST00000579122 RPL36ALQ969Q0 106 aaKnown RBP12.47□□□□□ -0.41
CDKN2A-213ENST00000579122 YPEL4Q96NS1 127 aa12.47□□□□□ -0.41
CDKN2A-213ENST00000579122 C1orf43Q9BWL3 253 aa12.47□□□□□ -0.41
CDKN2A-213ENST00000579122 CNFNQ9BYD5 112 aa12.47□□□□□ -0.41
CDKN2A-213ENST00000579122 PLA2G2DQ9UNK4 145 aa12.47□□□□□ -0.41
CDKN2A-213ENST00000579122 TGIF2-C20orf24A0A0A6YYL0 155 aa12.46□□□□□ -0.41
CDKN2A-213ENST00000579122 M0R381 172 aa12.46□□□□□ -0.41
CDKN2A-213ENST00000579122 RIGQ13278 110 aa12.46□□□□□ -0.41
CDKN2A-213ENST00000579122 MRPL54Q6P161 138 aaKnown RBP12.46□□□□□ -0.41
CDKN2A-213ENST00000579122 ZFP82Q8N141 532 aa12.46□□□□□ -0.41
CDKN2A-213ENST00000579122 TRBV7-3A0A075B6L6 115 aa12.45□□□□□ -0.42
CDKN2A-213ENST00000579122 NTF3P20783 257 aa12.45□□□□□ -0.42
CDKN2A-213ENST00000579122 TWIST1Q15672 202 aa12.45□□□□□ -0.42
CDKN2A-213ENST00000579122 TMEM262E9PQX1 116 aa12.44□□□□□ -0.42
CDKN2A-213ENST00000579122 RPL37AP61513 92 aaKnown RBP12.44□□□□□ -0.42
CDKN2A-213ENST00000579122 ENHOQ6UWT2 76 aa12.44□□□□□ -0.42
CDKN2A-213ENST00000579122 ATP5L2Q7Z4Y8 100 aa12.44□□□□□ -0.42
CDKN2A-213ENST00000579122 TRBV24-1A0A075B6N3 115 aa12.43□□□□□ -0.42
CDKN2A-213ENST00000579122 TRBV6-8A0A0A6YYG3 113 aa12.43□□□□□ -0.42
CDKN2A-213ENST00000579122 CRPP02741 224 aa12.43□□□□□ -0.42
CDKN2A-213ENST00000579122 A0A1B0GW15 77 aa12.42□□□□□ -0.42
CDKN2A-213ENST00000579122 A0A1B0GXF2 115 aa12.42□□□□□ -0.42
CDKN2A-213ENST00000579122 CAMPP49913 170 aa12.42□□□□□ -0.42
CDKN2A-213ENST00000579122 HBBP68871 147 aa12.42□□□□□ -0.42
CDKN2A-213ENST00000579122 COLCA2A8K830 154 aa12.41□□□□□ -0.42
CDKN2A-213ENST00000579122 USP17L23D6RBM5 183 aa12.4□□□□□ -0.42
CDKN2A-213ENST00000579122 S100A8P05109 93 aa12.4□□□□□ -0.42
CDKN2A-213ENST00000579122 RAB4BP61018 213 aa12.4□□□□□ -0.42
CDKN2A-213ENST00000579122 MPV17L2Q567V2 206 aa12.4□□□□□ -0.42
CDKN2A-213ENST00000579122 DGAT2L7PQ6IED9 249 aa12.4□□□□□ -0.42
CDKN2A-213ENST00000579122 ANGP03950 147 aaKnown RBP12.39□□□□□ -0.43
CDKN2A-213ENST00000579122 TRGC1P0CF51 173 aa12.39□□□□□ -0.43
CDKN2A-213ENST00000579122 PKIAP61925 76 aa12.39□□□□□ -0.43
CDKN2A-213ENST00000579122 RASL11AQ6T310 242 aa12.39□□□□□ -0.43
CDKN2A-213ENST00000579122 HNRNPA3P51991 378 aaKnown RBP12.38□□□□□ -0.43
CDKN2A-213ENST00000579122 MIAQ16674 131 aa12.38□□□□□ -0.43
CDKN2A-213ENST00000579122 SMIM15Q7Z3B0 74 aa12.38□□□□□ -0.43
CDKN2A-213ENST00000579122 NEXN-AS1Q8NBZ9 246 aa12.38□□□□□ -0.43
CDKN2A-213ENST00000579122 AP1S3Q96PC3 154 aa12.38□□□□□ -0.43
CDKN2A-213ENST00000579122 HLA-DQA1P01909 254 aa12.37□□□□□ -0.43
CDKN2A-213ENST00000579122 PRSS1P07477 247 aa12.37□□□□□ -0.43
CDKN2A-213ENST00000579122 TMEM136Q6ZRR5 245 aa12.37□□□□□ -0.43
CDKN2A-213ENST00000579122 C9orf163Q8N9P6 203 aa12.37□□□□□ -0.43
CDKN2A-213ENST00000579122 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.37□□□□□ -0.43
CDKN2A-213ENST00000579122 TMEM191AQ9H0A3 160 aa12.37□□□□□ -0.43
CDKN2A-213ENST00000579122 SMIM17P0DL12 118 aa12.36□□□□□ -0.43
CDKN2A-213ENST00000579122 ZNF56Q15929 161 aa12.36□□□□□ -0.43
CDKN2A-213ENST00000579122 COX19Q49B96 90 aa12.36□□□□□ -0.43
CDKN2A-213ENST00000579122 GATD1Q8NB37 220 aa12.36□□□□□ -0.43
CDKN2A-213ENST00000579122 CHCHD5Q9BSY4 110 aa12.36□□□□□ -0.43
CDKN2A-213ENST00000579122 GNB1LQ9BYB4 327 aa12.36□□□□□ -0.43
CDKN2A-213ENST00000579122 RAB5AP20339 215 aa12.35□□□□□ -0.43
CDKN2A-213ENST00000579122 DPH3P1Q9H4G8 78 aa12.35□□□□□ -0.43
CDKN2A-213ENST00000579122 KIF25-AS1Q9Y6Z4 181 aa12.35□□□□□ -0.43
CDKN2A-213ENST00000579122 TMEM97Q5BJF2 176 aa12.34□□□□□ -0.43
CDKN2A-213ENST00000579122 PRR34Q9NV39 138 aa12.34□□□□□ -0.43
CDKN2A-213ENST00000579122 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.34□□□□□ -0.43
CDKN2A-213ENST00000579122 RPS10P46783 165 aaKnown RBP12.33□□□□□ -0.44
CDKN2A-213ENST00000579122 FAM104BQ5XKR9 115 aa12.33□□□□□ -0.44
CDKN2A-213ENST00000579122 AMN1Q8IY45 258 aa12.33□□□□□ -0.44
CDKN2A-213ENST00000579122 MT-ND6P03923 174 aa12.32□□□□□ -0.44
CDKN2A-213ENST00000579122 MGPP08493 103 aa12.32□□□□□ -0.44
CDKN2A-213ENST00000579122 KRTAP26-1Q6PEX3 210 aa12.32□□□□□ -0.44
CDKN2A-213ENST00000579122 SDIM1Q6ZPB5 146 aa12.32□□□□□ -0.44
CDKN2A-213ENST00000579122 RNF185Q96GF1 192 aa12.32□□□□□ -0.44
CDKN2A-213ENST00000579122 TRAPPC1Q9Y5R8 145 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 144.7 ms