RNA–Protein interactions for RNA: ENST00000579057.5

LINC00271-204, long intergenic non-protein coding RNA 271, humanhuman

TSL 2

Gene LINC00271, Length 464 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-204ENST00000579057 NKX2-5P52952 324 aaPredicted RBP5.83□□□□□ -1.48
LINC00271-204ENST00000579057 C15orf56Q8N910 161 aa5.83□□□□□ -1.48
LINC00271-204ENST00000579057 FER1L6-AS1Q8NA97 138 aa5.83□□□□□ -1.48
LINC00271-204ENST00000579057 KRTAP4-11Q9BYQ6 195 aa5.83□□□□□ -1.48
LINC00271-204ENST00000579057 BATF3Q9NR55 127 aa5.83□□□□□ -1.48
LINC00271-204ENST00000579057 PLAC8Q9NZF1 115 aa5.83□□□□□ -1.48
LINC00271-204ENST00000579057 TRBV20OR9-2A0A075B6H5 130 aa5.82□□□□□ -1.48
LINC00271-204ENST00000579057 IGHV3-64A0A075B6Q5 118 aa5.82□□□□□ -1.48
LINC00271-204ENST00000579057 A0A0D9SG52 128 aa5.82□□□□□ -1.48
LINC00271-204ENST00000579057 SMIM17P0DL12 118 aa5.82□□□□□ -1.48
LINC00271-204ENST00000579057 RAB5CP51148 216 aa5.82□□□□□ -1.48
LINC00271-204ENST00000579057 ODF1Q14990 250 aa5.82□□□□□ -1.48
LINC00271-204ENST00000579057 CENPWQ5EE01 88 aa5.82□□□□□ -1.48
LINC00271-204ENST00000579057 RASL11AQ6T310 242 aa5.82□□□□□ -1.48
LINC00271-204ENST00000579057 RNF185Q96GF1 192 aa5.82□□□□□ -1.48
LINC00271-204ENST00000579057 PGLYRP4Q96LB8 373 aa5.82□□□□□ -1.48
LINC00271-204ENST00000579057 TMEM243Q9BU79 118 aa5.82□□□□□ -1.48
LINC00271-204ENST00000579057 RAB19A4D1S5 217 aa5.81□□□□□ -1.48
LINC00271-204ENST00000579057 BCL2L11O43521 198 aa5.81□□□□□ -1.48
LINC00271-204ENST00000579057 OR2D3Q8NGH3 330 aa5.81□□□□□ -1.48
LINC00271-204ENST00000579057 TPPP3Q9BW30 176 aa5.81□□□□□ -1.48
LINC00271-204ENST00000579057 TRAV1-1A0A0B4J248 108 aa5.8□□□□□ -1.48
LINC00271-204ENST00000579057 HMSDA8MTL9 139 aa5.8□□□□□ -1.48
LINC00271-204ENST00000579057 H7C1H1 209 aa5.8□□□□□ -1.48
LINC00271-204ENST00000579057 PHOX2AO14813 284 aa5.8□□□□□ -1.48
LINC00271-204ENST00000579057 CACNG7P62955 275 aa5.8□□□□□ -1.48
LINC00271-204ENST00000579057 LYZL1Q6UWQ5 148 aa5.8□□□□□ -1.48
LINC00271-204ENST00000579057 NIT2Q9NQR4 276 aa5.8□□□□□ -1.48
LINC00271-204ENST00000579057 GNG13Q9P2W3 67 aa5.8□□□□□ -1.48
LINC00271-204ENST00000579057 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.79□□□□□ -1.48
LINC00271-204ENST00000579057 GAGE12HA6NDE8 117 aa5.79□□□□□ -1.48
LINC00271-204ENST00000579057 NTF3P20783 257 aa5.79□□□□□ -1.48
LINC00271-204ENST00000579057 CTRLP40313 264 aa5.79□□□□□ -1.48
LINC00271-204ENST00000579057 RPS20P60866 119 aaKnown RBP5.79□□□□□ -1.48
LINC00271-204ENST00000579057 COX6A2Q02221 97 aa5.79□□□□□ -1.48
LINC00271-204ENST00000579057 RGS21Q2M5E4 152 aa5.79□□□□□ -1.48
LINC00271-204ENST00000579057 PRSS3P2Q8NHM4 247 aa5.79□□□□□ -1.48
LINC00271-204ENST00000579057 CNFNQ9BYD5 112 aa5.79□□□□□ -1.48
LINC00271-204ENST00000579057 DPH3P1Q9H4G8 78 aa5.79□□□□□ -1.48
LINC00271-204ENST00000579057 MANBALQ9NQG1 85 aa5.79□□□□□ -1.48
LINC00271-204ENST00000579057 AP5S1Q9NUS5 200 aa5.79□□□□□ -1.48
LINC00271-204ENST00000579057 TRAV26-2A0A0B4J265 109 aa5.78□□□□□ -1.48
LINC00271-204ENST00000579057 KANTRA0A1W2PQU2 76 aa5.78□□□□□ -1.48
LINC00271-204ENST00000579057 F2Z2F3 143 aa5.78□□□□□ -1.48
LINC00271-204ENST00000579057 AMTP48728 403 aa5.78□□□□□ -1.48
LINC00271-204ENST00000579057 PRR3P79522 188 aaKnown RBP5.78□□□□□ -1.48
LINC00271-204ENST00000579057 HIGD2BQ4VC39 106 aa5.78□□□□□ -1.48
LINC00271-204ENST00000579057 Q6ZNX1 250 aa5.78□□□□□ -1.48
LINC00271-204ENST00000579057 C9orf62Q8N4C0 152 aa5.78□□□□□ -1.48
LINC00271-204ENST00000579057 GATD1Q8NB37 220 aa5.78□□□□□ -1.48
LINC00271-204ENST00000579057 SMIM12Q96EX1 92 aa5.78□□□□□ -1.48
LINC00271-204ENST00000579057 LINC01600Q96MT4 127 aa5.78□□□□□ -1.48
LINC00271-204ENST00000579057 MRPL18Q9H0U6 180 aaKnown RBP5.78□□□□□ -1.48
LINC00271-204ENST00000579057 GVQW2A0A096LPI5 108 aaPredicted RBP5.77□□□□□ -1.49
LINC00271-204ENST00000579057 NDUFS6O75380 124 aaKnown RBP5.77□□□□□ -1.49
LINC00271-204ENST00000579057 IFNA1P01562 189 aa5.77□□□□□ -1.49
LINC00271-204ENST00000579057 TRGC1P0CF51 173 aa5.77□□□□□ -1.49
LINC00271-204ENST00000579057 RPS10P46783 165 aaKnown RBP5.77□□□□□ -1.49
LINC00271-204ENST00000579057 GNG4P50150 75 aa5.77□□□□□ -1.49
LINC00271-204ENST00000579057 SULT1A2P50226 295 aa5.77□□□□□ -1.49
LINC00271-204ENST00000579057 MEF2BQ02080 365 aaPredicted RBP5.77□□□□□ -1.49
LINC00271-204ENST00000579057 COTL1Q14019 142 aa5.77□□□□□ -1.49
LINC00271-204ENST00000579057 WDR73Q6P4I2 378 aa5.77□□□□□ -1.49
LINC00271-204ENST00000579057 NUDT10Q8NFP7 164 aa5.77□□□□□ -1.49
LINC00271-204ENST00000579057 CHCHD10Q8WYQ3 142 aaPredicted RBP5.77□□□□□ -1.49
LINC00271-204ENST00000579057 RPL39LQ96EH5 51 aaKnown RBP5.77□□□□□ -1.49
LINC00271-204ENST00000579057 DPH3Q96FX2 82 aa5.77□□□□□ -1.49
LINC00271-204ENST00000579057 NUDT11Q96G61 164 aa5.77□□□□□ -1.49
LINC00271-204ENST00000579057 LPAP08519 4548 aa5.77□□□□□ -1.49
LINC00271-204ENST00000579057 A0A096LNI7 61 aa5.76□□□□□ -1.49
LINC00271-204ENST00000579057 IGKV2-24A0A0C4DH68 120 aa5.76□□□□□ -1.49
LINC00271-204ENST00000579057 UBE2L6O14933 153 aa5.76□□□□□ -1.49
LINC00271-204ENST00000579057 FOXA3P55318 350 aaPredicted RBP5.76□□□□□ -1.49
LINC00271-204ENST00000579057 FOXI1Q12951 378 aa5.76□□□□□ -1.49
LINC00271-204ENST00000579057 MAJINQ3KP22 176 aa5.76□□□□□ -1.49
LINC00271-204ENST00000579057 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.75□□□□□ -1.49
LINC00271-204ENST00000579057 IGKV3OR2-268A0A0C4DH90 116 aa5.75□□□□□ -1.49
LINC00271-204ENST00000579057 IGKV2-29A2NJV5 120 aaPredicted RBP5.75□□□□□ -1.49
LINC00271-204ENST00000579057 XKRY2A2RUG3 117 aa5.75□□□□□ -1.49
LINC00271-204ENST00000579057 FAM231BA6NCW3 169 aa5.75□□□□□ -1.49
LINC00271-204ENST00000579057 K7EN84 100 aa5.75□□□□□ -1.49
LINC00271-204ENST00000579057 KRTAP10-8P60410 259 aa5.75□□□□□ -1.49
LINC00271-204ENST00000579057 EIF5AP63241 154 aaKnown RBP5.75□□□□□ -1.49
LINC00271-204ENST00000579057 CFAP161Q6P656 301 aa5.75□□□□□ -1.49
LINC00271-204ENST00000579057 C7orf33Q8WU49 177 aa5.75□□□□□ -1.49
LINC00271-204ENST00000579057 GTSF1Q8WW33 167 aa5.75□□□□□ -1.49
LINC00271-204ENST00000579057 MED9Q9NWA0 146 aa5.75□□□□□ -1.49
LINC00271-204ENST00000579057 A0A0J9YXV3 536 aa5.74□□□□□ -1.49
LINC00271-204ENST00000579057 PDE6DO43924 150 aa5.74□□□□□ -1.49
LINC00271-204ENST00000579057 GAS8-AS1O95177 125 aa5.74□□□□□ -1.49
LINC00271-204ENST00000579057 BCL2P10415 239 aa5.74□□□□□ -1.49
LINC00271-204ENST00000579057 FGF6P10767 208 aa5.74□□□□□ -1.49
LINC00271-204ENST00000579057 TWIST1Q15672 202 aa5.74□□□□□ -1.49
LINC00271-204ENST00000579057 STPG4Q8N801 248 aa5.74□□□□□ -1.49
LINC00271-204ENST00000579057 LYPD6BQ8NI32 183 aa5.74□□□□□ -1.49
LINC00271-204ENST00000579057 RNASE7Q9H1E1 156 aaKnown RBP5.74□□□□□ -1.49
LINC00271-204ENST00000579057 NCR2O95944 276 aa5.73□□□□□ -1.49
LINC00271-204ENST00000579057 SRSF9Q13242 221 aaKnown RBP eCLIP5.73□□□□□ -1.49
LINC00271-204ENST00000579057 OCC1Q8TAD7 63 aa5.73□□□□□ -1.49
LINC00271-204ENST00000579057 LINC00526Q96FQ7 95 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms