RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 SNAPINO95295 136 aa4.7□□□□□ -1.66
CDK5RAP3-209ENST00000578663 MGPP08493 103 aa4.7□□□□□ -1.66
CDK5RAP3-209ENST00000578663 TRGC1P0CF51 173 aa4.7□□□□□ -1.66
CDK5RAP3-209ENST00000578663 HNRNPA3P51991 378 aaKnown RBP4.7□□□□□ -1.66
CDK5RAP3-209ENST00000578663 MRPL54Q6P161 138 aaKnown RBP4.7□□□□□ -1.66
CDK5RAP3-209ENST00000578663 ZFP2Q6ZN57 461 aa4.7□□□□□ -1.66
CDK5RAP3-209ENST00000578663 Q6ZRU5 148 aa4.7□□□□□ -1.66
CDK5RAP3-209ENST00000578663 SVBPQ8N300 66 aa4.7□□□□□ -1.66
CDK5RAP3-209ENST00000578663 BORCS7Q96B45 105 aa4.7□□□□□ -1.66
CDK5RAP3-209ENST00000578663 CTDSP1Q9GZU7 261 aa4.7□□□□□ -1.66
CDK5RAP3-209ENST00000578663 Q9UF83 564 aa4.7□□□□□ -1.66
CDK5RAP3-209ENST00000578663 A0A1B0GXF2 115 aa4.69□□□□□ -1.66
CDK5RAP3-209ENST00000578663 CIDEAO60543 219 aa4.69□□□□□ -1.66
CDK5RAP3-209ENST00000578663 SMIM17P0DL12 118 aa4.69□□□□□ -1.66
CDK5RAP3-209ENST00000578663 CAMPP49913 170 aa4.69□□□□□ -1.66
CDK5RAP3-209ENST00000578663 RIGQ13278 110 aa4.69□□□□□ -1.66
CDK5RAP3-209ENST00000578663 ZNF56Q15929 161 aa4.69□□□□□ -1.66
CDK5RAP3-209ENST00000578663 SLC25A29Q8N8R3 303 aa4.69□□□□□ -1.66
CDK5RAP3-209ENST00000578663 DPH3P1Q9H4G8 78 aa4.69□□□□□ -1.66
CDK5RAP3-209ENST00000578663 URGCP-MRPS24S4R325 110 aa4.69□□□□□ -1.66
CDK5RAP3-209ENST00000578663 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.68□□□□□ -1.66
CDK5RAP3-209ENST00000578663 TRAV8-6A0A0B4J262 113 aa4.68□□□□□ -1.66
CDK5RAP3-209ENST00000578663 TRBV6-4A0A1B0GX49 114 aa4.68□□□□□ -1.66
CDK5RAP3-209ENST00000578663 GAGE12JA6NER3 117 aa4.68□□□□□ -1.66
CDK5RAP3-209ENST00000578663 RAB4BP61018 213 aa4.68□□□□□ -1.66
CDK5RAP3-209ENST00000578663 HBBP68871 147 aa4.68□□□□□ -1.66
CDK5RAP3-209ENST00000578663 GAGE1Q13065 139 aa4.68□□□□□ -1.66
CDK5RAP3-209ENST00000578663 GAGE4Q13068 117 aa4.68□□□□□ -1.66
CDK5RAP3-209ENST00000578663 GAGE5Q13069 117 aa4.68□□□□□ -1.66
CDK5RAP3-209ENST00000578663 GAGE13Q4V321 117 aa4.68□□□□□ -1.66
CDK5RAP3-209ENST00000578663 SUMO4Q6EEV6 95 aa4.68□□□□□ -1.66
CDK5RAP3-209ENST00000578663 AMN1Q8IY45 258 aa4.68□□□□□ -1.66
CDK5RAP3-209ENST00000578663 RNF185Q96GF1 192 aa4.68□□□□□ -1.66
CDK5RAP3-209ENST00000578663 IMMP2LQ96T52 175 aa4.68□□□□□ -1.66
CDK5RAP3-209ENST00000578663 TMEM191AQ9H0A3 160 aa4.68□□□□□ -1.66
CDK5RAP3-209ENST00000578663 TMEM242Q9NWH2 141 aa4.68□□□□□ -1.66
CDK5RAP3-209ENST00000578663 COX11Q9Y6N1 276 aa4.68□□□□□ -1.66
CDK5RAP3-209ENST00000578663 TRAV8-3A0A0A6YYJ7 113 aa4.67□□□□□ -1.66
CDK5RAP3-209ENST00000578663 TRAV26-2A0A0B4J265 109 aa4.67□□□□□ -1.66
CDK5RAP3-209ENST00000578663 F5H697 171 aa4.67□□□□□ -1.66
CDK5RAP3-209ENST00000578663 LINC00694P0DN24 101 aa4.67□□□□□ -1.66
CDK5RAP3-209ENST00000578663 S100PP25815 95 aa4.67□□□□□ -1.66
CDK5RAP3-209ENST00000578663 ODF1Q14990 250 aa4.67□□□□□ -1.66
CDK5RAP3-209ENST00000578663 RHOHQ15669 191 aa4.67□□□□□ -1.66
CDK5RAP3-209ENST00000578663 LINC01620Q4KN68 170 aa4.67□□□□□ -1.66
CDK5RAP3-209ENST00000578663 KCNIP4Q6PIL6 250 aa4.67□□□□□ -1.66
CDK5RAP3-209ENST00000578663 SMIM15Q7Z3B0 74 aa4.67□□□□□ -1.66
CDK5RAP3-209ENST00000578663 ATP5L2Q7Z4Y8 100 aa4.67□□□□□ -1.66
CDK5RAP3-209ENST00000578663 CBLN2Q8IUK8 224 aa4.67□□□□□ -1.66
CDK5RAP3-209ENST00000578663 GATD1Q8NB37 220 aa4.67□□□□□ -1.66
CDK5RAP3-209ENST00000578663 BTF3L4Q96K17 158 aa4.67□□□□□ -1.66
CDK5RAP3-209ENST00000578663 PRADC1Q9BSG0 188 aa4.67□□□□□ -1.66
CDK5RAP3-209ENST00000578663 TRAV9-1A0A075B6T8 112 aa4.66□□□□□ -1.66
CDK5RAP3-209ENST00000578663 TGIF2-C20orf24A0A0A6YYL0 155 aa4.66□□□□□ -1.66
CDK5RAP3-209ENST00000578663 A0A1B0GW15 77 aa4.66□□□□□ -1.66
CDK5RAP3-209ENST00000578663 SMKR1H3BMG3 65 aa4.66□□□□□ -1.66
CDK5RAP3-209ENST00000578663 M0QY20 66 aa4.66□□□□□ -1.66
CDK5RAP3-209ENST00000578663 NCR2O95944 276 aa4.66□□□□□ -1.66
CDK5RAP3-209ENST00000578663 RAB4AP20338 218 aa4.66□□□□□ -1.66
CDK5RAP3-209ENST00000578663 FAM104BQ5XKR9 115 aa4.66□□□□□ -1.66
CDK5RAP3-209ENST00000578663 Q8N976 141 aa4.66□□□□□ -1.66
CDK5RAP3-209ENST00000578663 NEXN-AS1Q8NBZ9 246 aa4.66□□□□□ -1.66
CDK5RAP3-209ENST00000578663 ATP6V0E2Q8NHE4 81 aa4.66□□□□□ -1.66
CDK5RAP3-209ENST00000578663 RPL39LQ96EH5 51 aaKnown RBP4.66□□□□□ -1.66
CDK5RAP3-209ENST00000578663 YPEL4Q96NS1 127 aa4.66□□□□□ -1.66
CDK5RAP3-209ENST00000578663 TRBV10-1A0A0K0K1A3 114 aa4.65□□□□□ -1.67
CDK5RAP3-209ENST00000578663 LECT2O14960 151 aa4.65□□□□□ -1.67
CDK5RAP3-209ENST00000578663 SCO1O75880 301 aa4.65□□□□□ -1.67
CDK5RAP3-209ENST00000578663 S100A8P05109 93 aa4.65□□□□□ -1.67
CDK5RAP3-209ENST00000578663 RPS10P46783 165 aaKnown RBP4.65□□□□□ -1.67
CDK5RAP3-209ENST00000578663 ELOBQ15370 118 aa4.65□□□□□ -1.67
CDK5RAP3-209ENST00000578663 MRPL51Q4U2R6 128 aaKnown RBP4.65□□□□□ -1.67
CDK5RAP3-209ENST00000578663 OR10J3Q5JRS4 329 aa4.65□□□□□ -1.67
CDK5RAP3-209ENST00000578663 RASL11AQ6T310 242 aa4.65□□□□□ -1.67
CDK5RAP3-209ENST00000578663 TMEM136Q6ZRR5 245 aa4.65□□□□□ -1.67
CDK5RAP3-209ENST00000578663 TRBV24-1A0A075B6N3 115 aa4.64□□□□□ -1.67
CDK5RAP3-209ENST00000578663 H7C1H1 209 aa4.64□□□□□ -1.67
CDK5RAP3-209ENST00000578663 IGHV3-30P01768 117 aa4.64□□□□□ -1.67
CDK5RAP3-209ENST00000578663 IGHV3-33P01772 117 aa4.64□□□□□ -1.67
CDK5RAP3-209ENST00000578663 IGHV3-30-3P0DP02 117 aa4.64□□□□□ -1.67
CDK5RAP3-209ENST00000578663 IGHV3-30-5P0DP03 117 aa4.64□□□□□ -1.67
CDK5RAP3-209ENST00000578663 UBE2D3P61077 147 aa4.64□□□□□ -1.67
CDK5RAP3-209ENST00000578663 UBE2D2P62837 147 aa4.64□□□□□ -1.67
CDK5RAP3-209ENST00000578663 RPL36AP83881 106 aaKnown RBP4.64□□□□□ -1.67
CDK5RAP3-209ENST00000578663 NRACQ8N912 160 aa4.64□□□□□ -1.67
CDK5RAP3-209ENST00000578663 RPL36ALQ969Q0 106 aaKnown RBP4.64□□□□□ -1.67
CDK5RAP3-209ENST00000578663 RMI2Q96E14 147 aa4.64□□□□□ -1.67
CDK5RAP3-209ENST00000578663 MRAP2Q96G30 205 aa4.64□□□□□ -1.67
CDK5RAP3-209ENST00000578663 NIT2Q9NQR4 276 aa4.64□□□□□ -1.67
CDK5RAP3-209ENST00000578663 SMCO4Q9NRQ5 59 aa4.64□□□□□ -1.67
CDK5RAP3-209ENST00000578663 TRBV7-3A0A075B6L6 115 aa4.63□□□□□ -1.67
CDK5RAP3-209ENST00000578663 D6R8Y8 96 aa4.63□□□□□ -1.67
CDK5RAP3-209ENST00000578663 BAALCQ8WXS3 180 aa4.63□□□□□ -1.67
CDK5RAP3-209ENST00000578663 DNAJC30Q96LL9 226 aa4.63□□□□□ -1.67
CDK5RAP3-209ENST00000578663 TRBV6-5A0A0K0K1A5 114 aa4.62□□□□□ -1.67
CDK5RAP3-209ENST00000578663 NPYP01303 97 aa4.62□□□□□ -1.67
CDK5RAP3-209ENST00000578663 HLA-DQA1P01909 254 aa4.62□□□□□ -1.67
CDK5RAP3-209ENST00000578663 CKS2P33552 79 aa4.62□□□□□ -1.67
CDK5RAP3-209ENST00000578663 KIAA1644Q3SXP7 199 aa4.62□□□□□ -1.67
CDK5RAP3-209ENST00000578663 C14orf177Q52M58 125 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms