RNA–Protein interactions for RNA: ENST00000578029.1

KRT39-202, Transcript of keratin 39, humanhuman

TSL 3

Gene KRT39, Length 777 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-202ENST00000578029 CABIN1Q9Y6J0 2220 aa3.04□□□□□ -1.92
KRT39-202ENST00000578029 ABCA2Q9BZC7 2435 aa3.03□□□□□ -1.92
KRT39-202ENST00000578029 SVILO95425 2214 aa3.03□□□□□ -1.92
KRT39-202ENST00000578029 POLQO75417 2590 aa3.03□□□□□ -1.92
KRT39-202ENST00000578029 TRBV20OR9-2A0A075B6H5 130 aa3.03□□□□□ -1.92
KRT39-202ENST00000578029 TMSB15BA0A087X1C1 80 aa3.03□□□□□ -1.92
KRT39-202ENST00000578029 LINC01549A6NIU2 74 aa3.03□□□□□ -1.92
KRT39-202ENST00000578029 A8MU10 97 aa3.03□□□□□ -1.92
KRT39-202ENST00000578029 IBA57-AS1B1ANH7 110 aa3.03□□□□□ -1.92
KRT39-202ENST00000578029 ZNF73O43830 326 aaPredicted RBP3.03□□□□□ -1.92
KRT39-202ENST00000578029 CCKP06307 115 aa3.03□□□□□ -1.92
KRT39-202ENST00000578029 CKS2P33552 79 aa3.03□□□□□ -1.92
KRT39-202ENST00000578029 ABCA11PQ4W5N1 156 aa3.03□□□□□ -1.92
KRT39-202ENST00000578029 CLLU1OSQ5K130 101 aa3.03□□□□□ -1.92
KRT39-202ENST00000578029 SLC48A1Q6P1K1 146 aa3.03□□□□□ -1.92
KRT39-202ENST00000578029 Q6ZR03 302 aa3.03□□□□□ -1.92
KRT39-202ENST00000578029 LYZL2Q7Z4W2 148 aa3.03□□□□□ -1.92
KRT39-202ENST00000578029 ORMDL3Q8N138 153 aa3.03□□□□□ -1.92
KRT39-202ENST00000578029 LINC00337Q8N6G1 96 aa3.03□□□□□ -1.92
KRT39-202ENST00000578029 Q8N8P6 123 aa3.03□□□□□ -1.92
KRT39-202ENST00000578029 CIRBP-AS1Q8TBR5 109 aa3.03□□□□□ -1.92
KRT39-202ENST00000578029 TOMM6Q96B49 74 aa3.03□□□□□ -1.92
KRT39-202ENST00000578029 SLC50A1Q9BRV3 221 aa3.03□□□□□ -1.92
KRT39-202ENST00000578029 CYSTM1Q9H1C7 97 aa3.03□□□□□ -1.92
KRT39-202ENST00000578029 NAV3Q8IVL0 2385 aa3.03□□□□□ -1.92
KRT39-202ENST00000578029 DNHD1Q96M86 4753 aa3.02□□□□□ -1.93
KRT39-202ENST00000578029 SPTBN1Q01082 2364 aaKnown RBP3.02□□□□□ -1.93
KRT39-202ENST00000578029 SETD2Q9BYW2 2564 aaPredicted RBP3.02□□□□□ -1.93
KRT39-202ENST00000578029 A0A1W2PQD3 144 aa3.02□□□□□ -1.93
KRT39-202ENST00000578029 CISD3P0C7P0 127 aa3.02□□□□□ -1.93
KRT39-202ENST00000578029 RNASE2P10153 161 aaKnown RBP3.02□□□□□ -1.93
KRT39-202ENST00000578029 Q5W150 140 aa3.02□□□□□ -1.93
KRT39-202ENST00000578029 LYPD6Q86Y78 171 aa3.02□□□□□ -1.93
KRT39-202ENST00000578029 LINC00588Q9Y4M8 146 aa3.02□□□□□ -1.93
KRT39-202ENST00000578029 KIAA1671Q9BY89 1806 aa3.02□□□□□ -1.93
KRT39-202ENST00000578029 AHCTF1Q8WYP5 2266 aa3.02□□□□□ -1.93
KRT39-202ENST00000578029 GREB1Q4ZG55 1949 aa3.01□□□□□ -1.93
KRT39-202ENST00000578029 TRBV7-1A0A0A6YYK4 115 aa3.01□□□□□ -1.93
KRT39-202ENST00000578029 TRAV3A0A0B4J244 114 aa3.01□□□□□ -1.93
KRT39-202ENST00000578029 A8MUN3 132 aa3.01□□□□□ -1.93
KRT39-202ENST00000578029 TMEM14DPA8MWL7 114 aa3.01□□□□□ -1.93
KRT39-202ENST00000578029 C5orf67F2Z3F1 127 aa3.01□□□□□ -1.93
KRT39-202ENST00000578029 H7BZZ5 65 aa3.01□□□□□ -1.93
KRT39-202ENST00000578029 COX7A2P2O60397 106 aa3.01□□□□□ -1.93
KRT39-202ENST00000578029 LTAP01374 205 aa3.01□□□□□ -1.93
KRT39-202ENST00000578029 IGKV1D-33P01593 117 aa3.01□□□□□ -1.93
KRT39-202ENST00000578029 IGKV1-33P01594 117 aa3.01□□□□□ -1.93
KRT39-202ENST00000578029 IFI27P40305 119 aaPredicted RBP3.01□□□□□ -1.93
KRT39-202ENST00000578029 UBE2BP63146 152 aa3.01□□□□□ -1.93
KRT39-202ENST00000578029 SS18Q15532 418 aa3.01□□□□□ -1.93
KRT39-202ENST00000578029 UBALD1Q8TB05 177 aa3.01□□□□□ -1.93
KRT39-202ENST00000578029 SPTSSAQ969W0 71 aa3.01□□□□□ -1.93
KRT39-202ENST00000578029 SPG11Q96JI7 2443 aa3.01□□□□□ -1.93
KRT39-202ENST00000578029 LAMA1P25391 3075 aa3.01□□□□□ -1.93
KRT39-202ENST00000578029 SPAG17Q6Q759 2223 aa3□□□□□ -1.93
KRT39-202ENST00000578029 USP9YO00507 2555 aaPredicted RBP3□□□□□ -1.93
KRT39-202ENST00000578029 IGLV3-16A0A075B6K0 115 aa3□□□□□ -1.93
KRT39-202ENST00000578029 TRAV8-3A0A0A6YYJ7 113 aa3□□□□□ -1.93
KRT39-202ENST00000578029 IGHV1-3A0A0C4DH29 117 aa3□□□□□ -1.93
KRT39-202ENST00000578029 TEX49A0A1B0GTD5 131 aa3□□□□□ -1.93
KRT39-202ENST00000578029 J3QKU1 62 aa3□□□□□ -1.93
KRT39-202ENST00000578029 TMEM256-PLSCR3K7ERE1 68 aa3□□□□□ -1.93
KRT39-202ENST00000578029 LST1O00453 97 aa3□□□□□ -1.93
KRT39-202ENST00000578029 DNAH10OSP0CZ25 163 aa3□□□□□ -1.93
KRT39-202ENST00000578029 XCL1P47992 114 aa3□□□□□ -1.93
KRT39-202ENST00000578029 ZNF80P51504 273 aaPredicted RBP3□□□□□ -1.93
KRT39-202ENST00000578029 KRTAP10-12P60413 245 aa3□□□□□ -1.93
KRT39-202ENST00000578029 KLKP1Q107X0 134 aa3□□□□□ -1.93
KRT39-202ENST00000578029 Q6JHZ5 121 aa3□□□□□ -1.93
KRT39-202ENST00000578029 C2orf82Q6UX34 121 aa3□□□□□ -1.93
KRT39-202ENST00000578029 PRNTQ86SH4 94 aa3□□□□□ -1.93
KRT39-202ENST00000578029 Q8N7P7 452 aa3□□□□□ -1.93
KRT39-202ENST00000578029 DAND5Q8N907 189 aa3□□□□□ -1.93
KRT39-202ENST00000578029 Q8N9L7 120 aa3□□□□□ -1.93
KRT39-202ENST00000578029 RNASE6Q93091 150 aaKnown RBP3□□□□□ -1.93
KRT39-202ENST00000578029 Q96M85 177 aa3□□□□□ -1.93
KRT39-202ENST00000578029 MTORP42345 2549 aa3□□□□□ -1.93
KRT39-202ENST00000578029 ITPR2Q14571 2701 aa3□□□□□ -1.93
KRT39-202ENST00000578029 NBPF19A0A087WUL8 3843 aa3□□□□□ -1.93
KRT39-202ENST00000578029 KIAA1549Q9HCM3 1950 aa3□□□□□ -1.93
KRT39-202ENST00000578029 URB1O60287 2271 aaKnown RBP2.99□□□□□ -1.93
KRT39-202ENST00000578029 IGKV1-6A0A0C4DH72 117 aa2.99□□□□□ -1.93
KRT39-202ENST00000578029 CPSF4LA6NMK7 179 aaKnown RBP2.99□□□□□ -1.93
KRT39-202ENST00000578029 M0R381 172 aa2.99□□□□□ -1.93
KRT39-202ENST00000578029 SPINK4O60575 86 aa2.99□□□□□ -1.93
KRT39-202ENST00000578029 FCER1GP30273 86 aa2.99□□□□□ -1.93
KRT39-202ENST00000578029 NOVP48745 357 aa2.99□□□□□ -1.93
KRT39-202ENST00000578029 RBM3P98179 157 aaKnown RBP2.99□□□□□ -1.93
KRT39-202ENST00000578029 KISS1Q15726 138 aa2.99□□□□□ -1.93
KRT39-202ENST00000578029 LUZP6Q538Z0 58 aa2.99□□□□□ -1.93
KRT39-202ENST00000578029 GDF5OSQ5U4N7 250 aa2.99□□□□□ -1.93
KRT39-202ENST00000578029 LYPD5Q6UWN5 251 aa2.99□□□□□ -1.93
KRT39-202ENST00000578029 FXYD5Q96DB9 178 aa2.99□□□□□ -1.93
KRT39-202ENST00000578029 ZNF714Q96N38 554 aa2.99□□□□□ -1.93
KRT39-202ENST00000578029 CCL13Q99616 98 aa2.99□□□□□ -1.93
KRT39-202ENST00000578029 PRO1854Q9UHT4 67 aa2.99□□□□□ -1.93
KRT39-202ENST00000578029 ATMQ13315 3056 aa2.99□□□□□ -1.93
KRT39-202ENST00000578029 TLN1Q9Y490 2541 aaKnown RBP2.99□□□□□ -1.93
KRT39-202ENST00000578029 PTPRBP23467 1997 aa2.99□□□□□ -1.93
KRT39-202ENST00000578029 PCNX2A6NKB5 2137 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms