RNA–Protein interactions for RNA: ENST00000578018.5

CDK5RAP3-206, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 567 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-206ENST00000578018 SSTP61278 116 aa10.82□□□□□ -0.68
CDK5RAP3-206ENST00000578018 ADIRFQ15847 76 aa10.82□□□□□ -0.68
CDK5RAP3-206ENST00000578018 LYZL1Q6UWQ5 148 aa10.82□□□□□ -0.68
CDK5RAP3-206ENST00000578018 CIRBP-AS1Q8TBR5 109 aa10.82□□□□□ -0.68
CDK5RAP3-206ENST00000578018 DEFB104AQ8WTQ1 72 aa10.82□□□□□ -0.68
CDK5RAP3-206ENST00000578018 GTSF1Q8WW33 167 aa10.82□□□□□ -0.68
CDK5RAP3-206ENST00000578018 GFRA4Q9GZZ7 299 aa10.82□□□□□ -0.68
CDK5RAP3-206ENST00000578018 KRTAP29-1A8MX34 341 aaPredicted RBP10.81□□□□□ -0.68
CDK5RAP3-206ENST00000578018 SMIM17P0DL12 118 aa10.81□□□□□ -0.68
CDK5RAP3-206ENST00000578018 MIAQ16674 131 aa10.81□□□□□ -0.68
CDK5RAP3-206ENST00000578018 TMEM97Q5BJF2 176 aa10.81□□□□□ -0.68
CDK5RAP3-206ENST00000578018 TSKUQ8WUA8 353 aa10.81□□□□□ -0.68
CDK5RAP3-206ENST00000578018 V9GYV3 84 aa10.81□□□□□ -0.68
CDK5RAP3-206ENST00000578018 TMEM218A2RU14 115 aa10.8□□□□□ -0.68
CDK5RAP3-206ENST00000578018 USP17L23D6RBM5 183 aa10.8□□□□□ -0.68
CDK5RAP3-206ENST00000578018 HLA-DQA1P01909 254 aa10.8□□□□□ -0.68
CDK5RAP3-206ENST00000578018 PNRC1Q12796 327 aaPredicted RBP10.8□□□□□ -0.68
CDK5RAP3-206ENST00000578018 TPPP3Q9BW30 176 aa10.8□□□□□ -0.68
CDK5RAP3-206ENST00000578018 PRR34Q9NV39 138 aa10.8□□□□□ -0.68
CDK5RAP3-206ENST00000578018 RBX1P62877 108 aa10.79□□□□□ -0.68
CDK5RAP3-206ENST00000578018 COMMD7Q86VX2 200 aa10.79□□□□□ -0.68
CDK5RAP3-206ENST00000578018 LRP1Q07954 4544 aaKnown RBP10.78□□□□□ -0.68
CDK5RAP3-206ENST00000578018 TRBV25-1A0A075B6N4 114 aa10.78□□□□□ -0.68
CDK5RAP3-206ENST00000578018 M0QY20 66 aa10.78□□□□□ -0.68
CDK5RAP3-206ENST00000578018 MGPP08493 103 aa10.78□□□□□ -0.68
CDK5RAP3-206ENST00000578018 NTF3P20783 257 aa10.78□□□□□ -0.68
CDK5RAP3-206ENST00000578018 GAGE6Q13070 117 aa10.78□□□□□ -0.68
CDK5RAP3-206ENST00000578018 CLPSL2Q6UWE3 100 aa10.78□□□□□ -0.68
CDK5RAP3-206ENST00000578018 PRSS1P07477 247 aa10.77□□□□□ -0.69
CDK5RAP3-206ENST00000578018 IQCJQ1A5X6 159 aa10.77□□□□□ -0.69
CDK5RAP3-206ENST00000578018 KRTAP26-1Q6PEX3 210 aa10.77□□□□□ -0.69
CDK5RAP3-206ENST00000578018 PKHD1L1Q86WI1 4243 aa10.77□□□□□ -0.69
CDK5RAP3-206ENST00000578018 TRGC1P0CF51 173 aa10.76□□□□□ -0.69
CDK5RAP3-206ENST00000578018 SUMO4Q6EEV6 95 aa10.76□□□□□ -0.69
CDK5RAP3-206ENST00000578018 LINC00269Q8N2A0 174 aa10.76□□□□□ -0.69
CDK5RAP3-206ENST00000578018 SEC11CQ9BY50 192 aa10.76□□□□□ -0.69
CDK5RAP3-206ENST00000578018 IGHV1-24A0A0C4DH33 117 aa10.75□□□□□ -0.69
CDK5RAP3-206ENST00000578018 SMIM27A0A1W2PRY6 76 aa10.75□□□□□ -0.69
CDK5RAP3-206ENST00000578018 HIGD1CA8MV81 97 aa10.75□□□□□ -0.69
CDK5RAP3-206ENST00000578018 H7C1H1 209 aa10.75□□□□□ -0.69
CDK5RAP3-206ENST00000578018 PPP1R2P9O14990 202 aa10.75□□□□□ -0.69
CDK5RAP3-206ENST00000578018 ADCYAP1P18509 176 aa10.75□□□□□ -0.69
CDK5RAP3-206ENST00000578018 PGLYRP4Q96LB8 373 aa10.75□□□□□ -0.69
CDK5RAP3-206ENST00000578018 TWIST1Q15672 202 aa10.74□□□□□ -0.69
CDK5RAP3-206ENST00000578018 C10orf91Q5T1B1 145 aa10.74□□□□□ -0.69
CDK5RAP3-206ENST00000578018 DGAT2L7PQ6IED9 249 aa10.74□□□□□ -0.69
CDK5RAP3-206ENST00000578018 NAT8BQ9UHF3 227 aa10.74□□□□□ -0.69
CDK5RAP3-206ENST00000578018 FAT3Q8TDW7 4589 aa10.73□□□□□ -0.69
CDK5RAP3-206ENST00000578018 A0A1B0GUT8 65 aa10.73□□□□□ -0.69
CDK5RAP3-206ENST00000578018 F8W036 122 aa10.73□□□□□ -0.69
CDK5RAP3-206ENST00000578018 REG3AQ06141 175 aa10.73□□□□□ -0.69
CDK5RAP3-206ENST00000578018 NUP35Q8NFH5 326 aa10.73□□□□□ -0.69
CDK5RAP3-206ENST00000578018 ANAPC16Q96DE5 110 aa10.73□□□□□ -0.69
CDK5RAP3-206ENST00000578018 DPH3P1Q9H4G8 78 aa10.73□□□□□ -0.69
CDK5RAP3-206ENST00000578018 MT-ND4LP03901 98 aa10.72□□□□□ -0.69
CDK5RAP3-206ENST00000578018 RASL11AQ6T310 242 aa10.72□□□□□ -0.69
CDK5RAP3-206ENST00000578018 C9orf163Q8N9P6 203 aa10.72□□□□□ -0.69
CDK5RAP3-206ENST00000578018 C20orf203Q8NBC4 194 aa10.72□□□□□ -0.69
CDK5RAP3-206ENST00000578018 BORCS7Q96B45 105 aa10.72□□□□□ -0.69
CDK5RAP3-206ENST00000578018 IGLV10-54A0A075B6I4 117 aa10.71□□□□□ -0.69
CDK5RAP3-206ENST00000578018 TMEM243Q9BU79 118 aa10.71□□□□□ -0.69
CDK5RAP3-206ENST00000578018 A0A1B0GUV1 79 aa10.7□□□□□ -0.7
CDK5RAP3-206ENST00000578018 RIGQ13278 110 aa10.7□□□□□ -0.7
CDK5RAP3-206ENST00000578018 SMIM15Q7Z3B0 74 aa10.7□□□□□ -0.7
CDK5RAP3-206ENST00000578018 CARHSP1Q9Y2V2 147 aaKnown RBP10.7□□□□□ -0.7
CDK5RAP3-206ENST00000578018 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.7□□□□□ -0.7
CDK5RAP3-206ENST00000578018 IGLV4-60A0A075B6I1 120 aa10.69□□□□□ -0.7
CDK5RAP3-206ENST00000578018 RPL37AP61513 92 aaKnown RBP10.69□□□□□ -0.7
CDK5RAP3-206ENST00000578018 CLRN3Q8NCR9 226 aa10.69□□□□□ -0.7
CDK5RAP3-206ENST00000578018 TMEM191AQ9H0A3 160 aa10.69□□□□□ -0.7
CDK5RAP3-206ENST00000578018 NIT2Q9NQR4 276 aa10.69□□□□□ -0.7
CDK5RAP3-206ENST00000578018 TRAV8-4A0A0B4J246 113 aa10.68□□□□□ -0.7
CDK5RAP3-206ENST00000578018 A0A1B0GW15 77 aa10.68□□□□□ -0.7
CDK5RAP3-206ENST00000578018 PANO1I0J062 215 aa10.68□□□□□ -0.7
CDK5RAP3-206ENST00000578018 OXTP01178 125 aa10.68□□□□□ -0.7
CDK5RAP3-206ENST00000578018 CNBPP62633 177 aaKnown RBP10.68□□□□□ -0.7
CDK5RAP3-206ENST00000578018 SDIM1Q6ZPB5 146 aa10.68□□□□□ -0.7
CDK5RAP3-206ENST00000578018 IMMP2LQ96T52 175 aa10.67□□□□□ -0.7
CDK5RAP3-206ENST00000578018 CTDSP1Q9GZU7 261 aa10.67□□□□□ -0.7
CDK5RAP3-206ENST00000578018 HMCN2Q8NDA2 5059 aa10.66□□□□□ -0.7
CDK5RAP3-206ENST00000578018 HNRNPA3P51991 378 aaKnown RBP10.66□□□□□ -0.7
CDK5RAP3-206ENST00000578018 A0A1B0GXF2 115 aa10.65□□□□□ -0.7
CDK5RAP3-206ENST00000578018 hDV102S1A0JD36 115 aa10.65□□□□□ -0.7
CDK5RAP3-206ENST00000578018 UBE2L6O14933 153 aa10.65□□□□□ -0.7
CDK5RAP3-206ENST00000578018 AMTP48728 403 aa10.65□□□□□ -0.7
CDK5RAP3-206ENST00000578018 CIRBPQ14011 172 aaKnown RBP10.65□□□□□ -0.7
CDK5RAP3-206ENST00000578018 COTL1Q14019 142 aa10.65□□□□□ -0.7
CDK5RAP3-206ENST00000578018 ATP5L2Q7Z4Y8 100 aa10.65□□□□□ -0.7
CDK5RAP3-206ENST00000578018 GATD1Q8NB37 220 aa10.65□□□□□ -0.7
CDK5RAP3-206ENST00000578018 TMEM242Q9NWH2 141 aa10.65□□□□□ -0.7
CDK5RAP3-206ENST00000578018 S100A8P05109 93 aa10.64□□□□□ -0.71
CDK5RAP3-206ENST00000578018 TRAV26-2A0A0B4J265 109 aa10.63□□□□□ -0.71
CDK5RAP3-206ENST00000578018 RAB4AP20338 218 aa10.63□□□□□ -0.71
CDK5RAP3-206ENST00000578018 SERTAD4-AS1Q5TG53 156 aa10.63□□□□□ -0.71
CDK5RAP3-206ENST00000578018 RNF185Q96GF1 192 aa10.63□□□□□ -0.71
CDK5RAP3-206ENST00000578018 SLPIP03973 132 aa10.62□□□□□ -0.71
CDK5RAP3-206ENST00000578018 HBBP68871 147 aa10.62□□□□□ -0.71
CDK5RAP3-206ENST00000578018 RHEBQ15382 184 aa10.62□□□□□ -0.71
CDK5RAP3-206ENST00000578018 AP5S1Q9NUS5 200 aa10.62□□□□□ -0.71
CDK5RAP3-206ENST00000578018 IGHV3-64A0A075B6Q5 118 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms