RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 GAGE6Q13070 117 aa6.36□□□□□ -1.39
NPLOC4-220ENST00000576940 TMEM241Q24JQ0 296 aa6.36□□□□□ -1.39
NPLOC4-220ENST00000576940 SPACA4Q8TDM5 124 aa6.36□□□□□ -1.39
NPLOC4-220ENST00000576940 GTSF1Q8WW33 167 aa6.36□□□□□ -1.39
NPLOC4-220ENST00000576940 RNF185Q96GF1 192 aa6.35□□□□□ -1.39
NPLOC4-220ENST00000576940 YPEL4Q96NS1 127 aa6.35□□□□□ -1.39
NPLOC4-220ENST00000576940 SMCO4Q9NRQ5 59 aa6.35□□□□□ -1.39
NPLOC4-220ENST00000576940 PLAC8Q9NZF1 115 aa6.35□□□□□ -1.39
NPLOC4-220ENST00000576940 TRBV20OR9-2A0A075B6H5 130 aa6.34□□□□□ -1.39
NPLOC4-220ENST00000576940 MUC21A0A0G2JKD1 596 aa6.34□□□□□ -1.39
NPLOC4-220ENST00000576940 SH2D1AO60880 128 aa6.34□□□□□ -1.39
NPLOC4-220ENST00000576940 RPL23P62829 140 aaKnown RBP6.34□□□□□ -1.39
NPLOC4-220ENST00000576940 CST9LP1Q5W188 147 aa6.34□□□□□ -1.39
NPLOC4-220ENST00000576940 WDR73Q6P4I2 378 aa6.34□□□□□ -1.39
NPLOC4-220ENST00000576940 COX8CQ7Z4L0 72 aa6.34□□□□□ -1.39
NPLOC4-220ENST00000576940 LINC01551Q86U37 167 aa6.34□□□□□ -1.39
NPLOC4-220ENST00000576940 C7orf33Q8WU49 177 aa6.34□□□□□ -1.39
NPLOC4-220ENST00000576940 ANAPC16Q96DE5 110 aa6.34□□□□□ -1.39
NPLOC4-220ENST00000576940 IMMP2LQ96T52 175 aa6.34□□□□□ -1.39
NPLOC4-220ENST00000576940 TRAV9-1A0A075B6T8 112 aa6.33□□□□□ -1.4
NPLOC4-220ENST00000576940 SCO2A0A1W2PP80 73 aa6.33□□□□□ -1.4
NPLOC4-220ENST00000576940 PPP1R2P9O14990 202 aa6.33□□□□□ -1.4
NPLOC4-220ENST00000576940 MT-ND4LP03901 98 aa6.33□□□□□ -1.4
NPLOC4-220ENST00000576940 RAB4BP61018 213 aa6.33□□□□□ -1.4
NPLOC4-220ENST00000576940 PRR3P79522 188 aaKnown RBP6.33□□□□□ -1.4
NPLOC4-220ENST00000576940 COX6A2Q02221 97 aa6.33□□□□□ -1.4
NPLOC4-220ENST00000576940 REG3AQ06141 175 aa6.33□□□□□ -1.4
NPLOC4-220ENST00000576940 ZNF56Q15929 161 aa6.33□□□□□ -1.4
NPLOC4-220ENST00000576940 PRR27Q6MZM9 219 aa6.33□□□□□ -1.4
NPLOC4-220ENST00000576940 ZFP82Q8N141 532 aa6.33□□□□□ -1.4
NPLOC4-220ENST00000576940 ISOC2Q96AB3 205 aa6.33□□□□□ -1.4
NPLOC4-220ENST00000576940 BTF3L4Q96K17 158 aa6.33□□□□□ -1.4
NPLOC4-220ENST00000576940 DERL1Q9BUN8 251 aa6.33□□□□□ -1.4
NPLOC4-220ENST00000576940 AP5S1Q9NUS5 200 aa6.33□□□□□ -1.4
NPLOC4-220ENST00000576940 TRBV24-1A0A075B6N3 115 aa6.32□□□□□ -1.4
NPLOC4-220ENST00000576940 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.32□□□□□ -1.4
NPLOC4-220ENST00000576940 PEX7O00628 323 aa6.32□□□□□ -1.4
NPLOC4-220ENST00000576940 RPL35P42766 123 aaKnown RBP6.32□□□□□ -1.4
NPLOC4-220ENST00000576940 UBE2G2P60604 165 aa6.32□□□□□ -1.4
NPLOC4-220ENST00000576940 PKIAP61925 76 aa6.32□□□□□ -1.4
NPLOC4-220ENST00000576940 MAJINQ3KP22 176 aa6.32□□□□□ -1.4
NPLOC4-220ENST00000576940 FAM231DQ6ZW35 169 aa6.32□□□□□ -1.4
NPLOC4-220ENST00000576940 Q86TA4 180 aa6.32□□□□□ -1.4
NPLOC4-220ENST00000576940 FMC1Q96HJ9 113 aa6.32□□□□□ -1.4
NPLOC4-220ENST00000576940 MLST8Q9BVC4 326 aa6.32□□□□□ -1.4
NPLOC4-220ENST00000576940 IGKV2-24A0A0C4DH68 120 aa6.31□□□□□ -1.4
NPLOC4-220ENST00000576940 MUC21A0A140T8X8 626 aa6.31□□□□□ -1.4
NPLOC4-220ENST00000576940 F5H697 171 aa6.31□□□□□ -1.4
NPLOC4-220ENST00000576940 SCO1O75880 301 aa6.31□□□□□ -1.4
NPLOC4-220ENST00000576940 SSTP61278 116 aa6.31□□□□□ -1.4
NPLOC4-220ENST00000576940 ZNF674Q2M3X9 581 aa6.31□□□□□ -1.4
NPLOC4-220ENST00000576940 FAM162BQ5T6X4 162 aa6.31□□□□□ -1.4
NPLOC4-220ENST00000576940 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.31□□□□□ -1.4
NPLOC4-220ENST00000576940 C20orf203Q8NBC4 194 aa6.31□□□□□ -1.4
NPLOC4-220ENST00000576940 PRSS3P2Q8NHM4 247 aa6.31□□□□□ -1.4
NPLOC4-220ENST00000576940 GFRA4Q9GZZ7 299 aa6.31□□□□□ -1.4
NPLOC4-220ENST00000576940 RPS10P5Q9NQ39 176 aa6.31□□□□□ -1.4
NPLOC4-220ENST00000576940 BIN3Q9NQY0 253 aa6.31□□□□□ -1.4
NPLOC4-220ENST00000576940 OSTCQ9NRP0 149 aa6.31□□□□□ -1.4
NPLOC4-220ENST00000576940 TRBV25-1A0A075B6N4 114 aa6.3□□□□□ -1.4
NPLOC4-220ENST00000576940 COLCA2A8K830 154 aa6.3□□□□□ -1.4
NPLOC4-220ENST00000576940 LTAP01374 205 aa6.3□□□□□ -1.4
NPLOC4-220ENST00000576940 AKR1C3P42330 323 aa6.3□□□□□ -1.4
NPLOC4-220ENST00000576940 GNG4P50150 75 aa6.3□□□□□ -1.4
NPLOC4-220ENST00000576940 SRSF9Q13242 221 aaKnown RBP eCLIP6.3□□□□□ -1.4
NPLOC4-220ENST00000576940 LINC01559Q495D7 138 aa6.3□□□□□ -1.4
NPLOC4-220ENST00000576940 CT83Q5H943 113 aa6.3□□□□□ -1.4
NPLOC4-220ENST00000576940 SPINK6Q6UWN8 80 aa6.3□□□□□ -1.4
NPLOC4-220ENST00000576940 STPG4Q8N801 248 aa6.3□□□□□ -1.4
NPLOC4-220ENST00000576940 OR10AG1Q8NH19 301 aa6.3□□□□□ -1.4
NPLOC4-220ENST00000576940 KRTAP9-2Q9BYQ4 174 aa6.3□□□□□ -1.4
NPLOC4-220ENST00000576940 ZFP30Q9Y2G7 519 aa6.3□□□□□ -1.4
NPLOC4-220ENST00000576940 IGLV4-60A0A075B6I1 120 aa6.29□□□□□ -1.4
NPLOC4-220ENST00000576940 TRAV8-4A0A0B4J246 113 aa6.29□□□□□ -1.4
NPLOC4-220ENST00000576940 P01737 135 aa6.29□□□□□ -1.4
NPLOC4-220ENST00000576940 TMEM97Q5BJF2 176 aa6.29□□□□□ -1.4
NPLOC4-220ENST00000576940 CENPWQ5EE01 88 aa6.29□□□□□ -1.4
NPLOC4-220ENST00000576940 REG3GQ6UW15 175 aa6.29□□□□□ -1.4
NPLOC4-220ENST00000576940 CBLN2Q8IUK8 224 aa6.29□□□□□ -1.4
NPLOC4-220ENST00000576940 OCC1Q8TAD7 63 aa6.29□□□□□ -1.4
NPLOC4-220ENST00000576940 FAM231BA6NCW3 169 aa6.28□□□□□ -1.4
NPLOC4-220ENST00000576940 RPS10P46783 165 aaKnown RBP6.28□□□□□ -1.4
NPLOC4-220ENST00000576940 ADIRFQ15847 76 aa6.28□□□□□ -1.4
NPLOC4-220ENST00000576940 IQCJQ1A5X6 159 aa6.28□□□□□ -1.4
NPLOC4-220ENST00000576940 C15orf56Q8N910 161 aa6.28□□□□□ -1.4
NPLOC4-220ENST00000576940 IGHV1-24A0A0C4DH33 117 aa6.27□□□□□ -1.41
NPLOC4-220ENST00000576940 K7EN84 100 aa6.27□□□□□ -1.41
NPLOC4-220ENST00000576940 CEBPGP53567 150 aa6.27□□□□□ -1.41
NPLOC4-220ENST00000576940 UBE2G1P62253 170 aa6.27□□□□□ -1.41
NPLOC4-220ENST00000576940 HIGD2BQ4VC39 106 aa6.27□□□□□ -1.41
NPLOC4-220ENST00000576940 A0A096LNI7 61 aa6.26□□□□□ -1.41
NPLOC4-220ENST00000576940 A0A1B0GUV1 79 aa6.26□□□□□ -1.41
NPLOC4-220ENST00000576940 C19orf71A6NCJ1 209 aa6.26□□□□□ -1.41
NPLOC4-220ENST00000576940 GAGE12HA6NDE8 117 aa6.26□□□□□ -1.41
NPLOC4-220ENST00000576940 GZMBP10144 247 aa6.26□□□□□ -1.41
NPLOC4-220ENST00000576940 RAB5AP20339 215 aa6.26□□□□□ -1.41
NPLOC4-220ENST00000576940 COX19Q49B96 90 aa6.26□□□□□ -1.41
NPLOC4-220ENST00000576940 SPANXN1Q5VSR9 72 aa6.26□□□□□ -1.41
NPLOC4-220ENST00000576940 RASL11AQ6T310 242 aa6.26□□□□□ -1.41
NPLOC4-220ENST00000576940 BAGE2Q86Y30 109 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms