RNA–Protein interactions for RNA: ENST00000576148.1

RAB40B-210, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40B, Length 343 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-210ENST00000576148 KRTAP9-8Q9BYQ0 159 aa3.96□□□□□ -1.78
RAB40B-210ENST00000576148 C11orf1Q9H5F2 150 aa3.96□□□□□ -1.78
RAB40B-210ENST00000576148 BATF3Q9NR55 127 aa3.96□□□□□ -1.78
RAB40B-210ENST00000576148 RSL24D1Q9UHA3 163 aaKnown RBP3.96□□□□□ -1.78
RAB40B-210ENST00000576148 NDUFA12Q9UI09 145 aa3.96□□□□□ -1.78
RAB40B-210ENST00000576148 LINC00959A0A1B0GUT2 108 aa3.95□□□□□ -1.78
RAB40B-210ENST00000576148 A6NHS1 94 aa3.95□□□□□ -1.78
RAB40B-210ENST00000576148 NOL3O60936 208 aaKnown RBP3.95□□□□□ -1.78
RAB40B-210ENST00000576148 COTL1Q14019 142 aa3.95□□□□□ -1.78
RAB40B-210ENST00000576148 ATP6V1FQ16864 119 aa3.95□□□□□ -1.78
RAB40B-210ENST00000576148 RNASEKQ6P5S7 137 aaKnown RBP3.95□□□□□ -1.78
RAB40B-210ENST00000576148 CD164L2Q6UWJ8 174 aa3.95□□□□□ -1.78
RAB40B-210ENST00000576148 KRTAP7-1Q8IUC3 87 aa3.95□□□□□ -1.78
RAB40B-210ENST00000576148 MCFD2Q8NI22 146 aa3.95□□□□□ -1.78
RAB40B-210ENST00000576148 AP3S1Q92572 193 aa3.95□□□□□ -1.78
RAB40B-210ENST00000576148 ZNF471Q9BX82 626 aaPredicted RBP3.95□□□□□ -1.78
RAB40B-210ENST00000576148 KCNIP2Q9NS61 270 aa3.95□□□□□ -1.78
RAB40B-210ENST00000576148 TMSB15BA0A087X1C1 80 aa3.94□□□□□ -1.78
RAB40B-210ENST00000576148 SMIM17P0DL12 118 aa3.94□□□□□ -1.78
RAB40B-210ENST00000576148 SULT1A1P50225 295 aa3.94□□□□□ -1.78
RAB40B-210ENST00000576148 NKX2-5P52952 324 aaPredicted RBP3.94□□□□□ -1.78
RAB40B-210ENST00000576148 NEDD8Q15843 81 aa3.94□□□□□ -1.78
RAB40B-210ENST00000576148 KRTAP19-6Q3LI70 58 aa3.94□□□□□ -1.78
RAB40B-210ENST00000576148 GAGE2EQ4V326 116 aa3.94□□□□□ -1.78
RAB40B-210ENST00000576148 STX12Q86Y82 276 aa3.94□□□□□ -1.78
RAB40B-210ENST00000576148 C5orf17Q8NAS9 161 aa3.94□□□□□ -1.78
RAB40B-210ENST00000576148 THAP6Q8TBB0 222 aa3.94□□□□□ -1.78
RAB40B-210ENST00000576148 NDUFA13Q9P0J0 144 aa3.94□□□□□ -1.78
RAB40B-210ENST00000576148 GAGE2DQ9UEU5 116 aa3.94□□□□□ -1.78
RAB40B-210ENST00000576148 M0QY20 66 aa3.93□□□□□ -1.78
RAB40B-210ENST00000576148 BCE1O60756 84 aa3.93□□□□□ -1.78
RAB40B-210ENST00000576148 SLC25A21Q9BQT8 299 aaPredicted RBP3.93□□□□□ -1.78
RAB40B-210ENST00000576148 LSM5Q9Y4Y9 91 aaKnown RBP3.93□□□□□ -1.78
RAB40B-210ENST00000576148 C9orf170A2RU37 121 aa3.92□□□□□ -1.78
RAB40B-210ENST00000576148 COX7A2LO14548 114 aa3.92□□□□□ -1.78
RAB40B-210ENST00000576148 SH2D1AO60880 128 aa3.92□□□□□ -1.78
RAB40B-210ENST00000576148 TLX1NBP0CAT3 122 aa3.92□□□□□ -1.78
RAB40B-210ENST00000576148 FAUP35544 74 aaKnown RBP3.92□□□□□ -1.78
RAB40B-210ENST00000576148 OR10AG1Q8NH19 301 aa3.92□□□□□ -1.78
RAB40B-210ENST00000576148 MRPL35Q9NZE8 188 aaKnown RBP3.92□□□□□ -1.78
RAB40B-210ENST00000576148 EPDR1Q9UM22 224 aa3.92□□□□□ -1.78
RAB40B-210ENST00000576148 H7C423 109 aa3.91□□□□□ -1.78
RAB40B-210ENST00000576148 PVALBP20472 110 aaPredicted RBP3.91□□□□□ -1.78
RAB40B-210ENST00000576148 CRIP1P50238 77 aa3.91□□□□□ -1.78
RAB40B-210ENST00000576148 LBHQ53QV2 105 aaPredicted RBP3.91□□□□□ -1.78
RAB40B-210ENST00000576148 SPANXN1Q5VSR9 72 aa3.91□□□□□ -1.78
RAB40B-210ENST00000576148 PQLC2Q6ZP29 291 aa3.91□□□□□ -1.78
RAB40B-210ENST00000576148 TMEM101Q96IK0 257 aa3.91□□□□□ -1.78
RAB40B-210ENST00000576148 BTF3L4Q96K17 158 aa3.91□□□□□ -1.78
RAB40B-210ENST00000576148 SMDT1Q9H4I9 107 aa3.91□□□□□ -1.78
RAB40B-210ENST00000576148 ARL2-SNX15V9GYD0 113 aa3.91□□□□□ -1.78
RAB40B-210ENST00000576148 MUC12Q9UKN1 5478 aa3.9□□□□□ -1.78
RAB40B-210ENST00000576148 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.9□□□□□ -1.79
RAB40B-210ENST00000576148 IGSF23A1L1A6 192 aa3.9□□□□□ -1.79
RAB40B-210ENST00000576148 IGKV2-29A2NJV5 120 aaPredicted RBP3.9□□□□□ -1.79
RAB40B-210ENST00000576148 C17orf112F2Z3M2 114 aa3.9□□□□□ -1.79
RAB40B-210ENST00000576148 G3V3Q6 166 aa3.9□□□□□ -1.79
RAB40B-210ENST00000576148 MGPP08493 103 aa3.9□□□□□ -1.79
RAB40B-210ENST00000576148 ZNF25P17030 456 aaPredicted RBP3.9□□□□□ -1.79
RAB40B-210ENST00000576148 SSTP61278 116 aa3.9□□□□□ -1.79
RAB40B-210ENST00000576148 NCS1P62166 190 aa3.9□□□□□ -1.79
RAB40B-210ENST00000576148 SPAG11BQ08648 103 aa3.9□□□□□ -1.79
RAB40B-210ENST00000576148 TMEM241Q24JQ0 296 aa3.9□□□□□ -1.79
RAB40B-210ENST00000576148 RASL11AQ6T310 242 aa3.9□□□□□ -1.79
RAB40B-210ENST00000576148 C3orf22Q8N5N4 141 aa3.9□□□□□ -1.79
RAB40B-210ENST00000576148 TMEM252Q8N6L7 170 aa3.9□□□□□ -1.79
RAB40B-210ENST00000576148 MUC21A0A140T8X8 626 aa3.89□□□□□ -1.79
RAB40B-210ENST00000576148 F8WDY8 70 aa3.89□□□□□ -1.79
RAB40B-210ENST00000576148 RGS5O15539 181 aa3.89□□□□□ -1.79
RAB40B-210ENST00000576148 KRTAP2-3P0C7H8 128 aa3.89□□□□□ -1.79
RAB40B-210ENST00000576148 VBP1P61758 197 aa3.89□□□□□ -1.79
RAB40B-210ENST00000576148 SUMO1P63165 101 aaKnown RBP3.89□□□□□ -1.79
RAB40B-210ENST00000576148 LINC01559Q495D7 138 aa3.89□□□□□ -1.79
RAB40B-210ENST00000576148 LRRC37A5PQ49AS3 106 aa3.89□□□□□ -1.79
RAB40B-210ENST00000576148 SUMO4Q6EEV6 95 aa3.89□□□□□ -1.79
RAB40B-210ENST00000576148 AP1S3Q96PC3 154 aa3.89□□□□□ -1.79
RAB40B-210ENST00000576148 KRTAP2-4Q9BYR9 128 aa3.89□□□□□ -1.79
RAB40B-210ENST00000576148 NIT2Q9NQR4 276 aa3.89□□□□□ -1.79
RAB40B-210ENST00000576148 A0A1W2PPV4 95 aa3.88□□□□□ -1.79
RAB40B-210ENST00000576148 NDUFA1O15239 70 aa3.88□□□□□ -1.79
RAB40B-210ENST00000576148 SPINK1P00995 79 aa3.88□□□□□ -1.79
RAB40B-210ENST00000576148 DEFA3P59666 94 aa3.88□□□□□ -1.79
RAB40B-210ENST00000576148 FAM19A2Q8N3H0 131 aa3.88□□□□□ -1.79
RAB40B-210ENST00000576148 FUNDC2Q9BWH2 189 aa3.88□□□□□ -1.79
RAB40B-210ENST00000576148 WDR61Q9GZS3 305 aaKnown RBP3.88□□□□□ -1.79
RAB40B-210ENST00000576148 C22orf24Q9Y442 160 aa3.88□□□□□ -1.79
RAB40B-210ENST00000576148 C1orf196B1AJZ1 125 aa3.87□□□□□ -1.79
RAB40B-210ENST00000576148 CTDSP2O14595 271 aa3.87□□□□□ -1.79
RAB40B-210ENST00000576148 CTRLP40313 264 aa3.87□□□□□ -1.79
RAB40B-210ENST00000576148 UBE2AP49459 152 aa3.87□□□□□ -1.79
RAB40B-210ENST00000576148 C9orf129Q5T035 196 aaKnown RBP3.87□□□□□ -1.79
RAB40B-210ENST00000576148 C10orf25Q5T742 122 aa3.87□□□□□ -1.79
RAB40B-210ENST00000576148 C5orf38Q86SI9 138 aa3.87□□□□□ -1.79
RAB40B-210ENST00000576148 OR10D4PQ8NGN7 298 aa3.87□□□□□ -1.79
RAB40B-210ENST00000576148 ALG5Q9Y673 324 aa3.87□□□□□ -1.79
RAB40B-210ENST00000576148 HMGB3O15347 200 aaKnown RBP3.86□□□□□ -1.79
RAB40B-210ENST00000576148 NCR2O95944 276 aa3.86□□□□□ -1.79
RAB40B-210ENST00000576148 APCSP02743 223 aa3.86□□□□□ -1.79
RAB40B-210ENST00000576148 OR5AL1P0C617 328 aa3.86□□□□□ -1.79
RAB40B-210ENST00000576148 NTF3P20783 257 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms