RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 ICOSQ9Y6W8 199 aa10.79□□□□□ -0.68
SCARF1-209ENST00000576012 IGHV3-38A0A0C4DH36 116 aa10.79□□□□□ -0.68
SCARF1-209ENST00000576012 TRBV10-2A0A0K0K1G8 114 aa10.79□□□□□ -0.68
SCARF1-209ENST00000576012 BLCAPP62952 87 aa10.78□□□□□ -0.68
SCARF1-209ENST00000576012 M0R2P5 195 aa10.78□□□□□ -0.68
SCARF1-209ENST00000576012 C5orf56Q8N8D9 126 aa10.78□□□□□ -0.68
SCARF1-209ENST00000576012 BPESC1Q9GZL8 116 aa10.78□□□□□ -0.68
SCARF1-209ENST00000576012 NDUFA12Q9UI09 145 aa10.78□□□□□ -0.68
SCARF1-209ENST00000576012 SONP18583 2426 aaKnown RBP10.78□□□□□ -0.68
SCARF1-209ENST00000576012 CFAP46Q8IYW2 2715 aa10.78□□□□□ -0.68
SCARF1-209ENST00000576012 LGALS9O00182 355 aa10.78□□□□□ -0.68
SCARF1-209ENST00000576012 NRGNQ92686 78 aa10.78□□□□□ -0.68
SCARF1-209ENST00000576012 SIRPDQ9H106 197 aa10.78□□□□□ -0.68
SCARF1-209ENST00000576012 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.77□□□□□ -0.68
SCARF1-209ENST00000576012 A0A1W2PPR1 153 aa10.77□□□□□ -0.69
SCARF1-209ENST00000576012 IGLV4-3A0A075B6K6 122 aa10.76□□□□□ -0.69
SCARF1-209ENST00000576012 RPL13AP40429 203 aaKnown RBP10.76□□□□□ -0.69
SCARF1-209ENST00000576012 LENEPQ9Y5L5 61 aa10.76□□□□□ -0.69
SCARF1-209ENST00000576012 M0QY20 66 aa10.76□□□□□ -0.69
SCARF1-209ENST00000576012 NPFFO15130 113 aa10.76□□□□□ -0.69
SCARF1-209ENST00000576012 COX6CP09669 75 aa10.76□□□□□ -0.69
SCARF1-209ENST00000576012 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.76□□□□□ -0.69
SCARF1-209ENST00000576012 IGHV4OR15-8A0A075B7B6 117 aa10.76□□□□□ -0.69
SCARF1-209ENST00000576012 A0A087WW49 117 aa10.76□□□□□ -0.69
SCARF1-209ENST00000576012 A0A0B4J2C4 111 aa10.76□□□□□ -0.69
SCARF1-209ENST00000576012 FAM236AA0A1B0GUQ0 79 aa10.76□□□□□ -0.69
SCARF1-209ENST00000576012 FAM236BA0A1B0GV22 79 aa10.76□□□□□ -0.69
SCARF1-209ENST00000576012 IGKV2-29A2NJV5 120 aaPredicted RBP10.76□□□□□ -0.69
SCARF1-209ENST00000576012 TRGV11A0A075B6L2 103 aa10.75□□□□□ -0.69
SCARF1-209ENST00000576012 SOCS3O14543 225 aa10.75□□□□□ -0.69
SCARF1-209ENST00000576012 TRBV27A0A0K0K1C4 114 aa10.75□□□□□ -0.69
SCARF1-209ENST00000576012 C20orf203Q8NBC4 194 aa10.75□□□□□ -0.69
SCARF1-209ENST00000576012 I3L3M4 83 aa10.75□□□□□ -0.69
SCARF1-209ENST00000576012 OOSP1A8MZH6 123 aa10.74□□□□□ -0.69
SCARF1-209ENST00000576012 CCDC168Q8NDH2 2452 aa10.74□□□□□ -0.69
SCARF1-209ENST00000576012 UCNP55089 124 aa10.74□□□□□ -0.69
SCARF1-209ENST00000576012 IGHV3-16A0A0C4DH30 117 aa10.73□□□□□ -0.69
SCARF1-209ENST00000576012 F5H768 121 aa10.73□□□□□ -0.69
SCARF1-209ENST00000576012 C10orf99Q6UWK7 81 aa10.73□□□□□ -0.69
SCARF1-209ENST00000576012 KLK5Q9Y337 293 aaPredicted RBP10.73□□□□□ -0.69
SCARF1-209ENST00000576012 POM121L12Q8N7R1 296 aa10.72□□□□□ -0.69
SCARF1-209ENST00000576012 NDUFA4O00483 81 aa10.71□□□□□ -0.69
SCARF1-209ENST00000576012 SYNJ2BPP57105 145 aa10.71□□□□□ -0.69
SCARF1-209ENST00000576012 TRBV30A0A0K0K1B3 111 aa10.71□□□□□ -0.69
SCARF1-209ENST00000576012 H3BUX3 64 aa10.71□□□□□ -0.7
SCARF1-209ENST00000576012 MOB4Q9Y3A3 225 aa10.71□□□□□ -0.7
SCARF1-209ENST00000576012 ADORA2A-AS1P86434 159 aa10.7□□□□□ -0.7
SCARF1-209ENST00000576012 LITAFQ99732 161 aa10.7□□□□□ -0.7
SCARF1-209ENST00000576012 DAZ1Q9NQZ3 744 aaKnown RBP10.69□□□□□ -0.7
SCARF1-209ENST00000576012 LOC107984640A0A0U1RRK4 108 aa10.69□□□□□ -0.7
SCARF1-209ENST00000576012 KLLNB2CW77 178 aa10.69□□□□□ -0.7
SCARF1-209ENST00000576012 HOXD3P31249 432 aaPredicted RBP10.69□□□□□ -0.7
SCARF1-209ENST00000576012 HIST2H2BDQ6DRA6 164 aa10.69□□□□□ -0.7
SCARF1-209ENST00000576012 NXPH4O95158 308 aa10.69□□□□□ -0.7
SCARF1-209ENST00000576012 FAM223BA6NKX1 122 aa10.68□□□□□ -0.7
SCARF1-209ENST00000576012 FAM223AQ8IWN6 122 aa10.68□□□□□ -0.7
SCARF1-209ENST00000576012 FAM19A4Q96LR4 140 aa10.68□□□□□ -0.7
SCARF1-209ENST00000576012 IGHV4-38-2P0DP08 117 aa10.68□□□□□ -0.7
SCARF1-209ENST00000576012 MED14OSP0DP75 135 aa10.68□□□□□ -0.7
SCARF1-209ENST00000576012 NDUFA7O95182 113 aa10.67□□□□□ -0.7
SCARF1-209ENST00000576012 CDKN2A-AS1Q9UH64 79 aa10.67□□□□□ -0.7
SCARF1-209ENST00000576012 IGHV1OR15-1A0A075B7D0 117 aa10.67□□□□□ -0.7
SCARF1-209ENST00000576012 IGHV1-69P01742 117 aa10.67□□□□□ -0.7
SCARF1-209ENST00000576012 C9orf153Q5TBE3 101 aa10.67□□□□□ -0.7
SCARF1-209ENST00000576012 C11orf71Q6IPW1 123 aa10.67□□□□□ -0.7
SCARF1-209ENST00000576012 SEC61GP60059 68 aa10.66□□□□□ -0.7
SCARF1-209ENST00000576012 JMJD1CQ15652 2540 aa10.66□□□□□ -0.7
SCARF1-209ENST00000576012 IGHV1-58A0A0C4DH39 117 aa10.66□□□□□ -0.7
SCARF1-209ENST00000576012 NSUN5P1Q3KNT7 163 aa10.66□□□□□ -0.7
SCARF1-209ENST00000576012 DGAT2L7PQ6IED9 249 aa10.66□□□□□ -0.7
SCARF1-209ENST00000576012 TMEM61Q8N0U2 210 aa10.66□□□□□ -0.7
SCARF1-209ENST00000576012 Q9HAA7 133 aa10.66□□□□□ -0.7
SCARF1-209ENST00000576012 LINC00694P0DN24 101 aa10.66□□□□□ -0.7
SCARF1-209ENST00000576012 RHOHQ15669 191 aa10.66□□□□□ -0.7
SCARF1-209ENST00000576012 MIAQ16674 131 aa10.66□□□□□ -0.7
SCARF1-209ENST00000576012 Q8N2B8 174 aa10.66□□□□□ -0.7
SCARF1-209ENST00000576012 LST1O00453 97 aa10.65□□□□□ -0.7
SCARF1-209ENST00000576012 Q6ZSN1 163 aa10.65□□□□□ -0.7
SCARF1-209ENST00000576012 ABCA2Q9BZC7 2435 aa10.65□□□□□ -0.7
SCARF1-209ENST00000576012 LMO4P61968 165 aa10.65□□□□□ -0.7
SCARF1-209ENST00000576012 KLRB1Q12918 225 aa10.65□□□□□ -0.7
SCARF1-209ENST00000576012 DCANP1Q8TF63 244 aa10.65□□□□□ -0.7
SCARF1-209ENST00000576012 TMEM101Q96IK0 257 aa10.65□□□□□ -0.7
SCARF1-209ENST00000576012 TRBV6-5A0A0K0K1A5 114 aa10.64□□□□□ -0.71
SCARF1-209ENST00000576012 SMCR5Q8TEV8 140 aa10.64□□□□□ -0.71
SCARF1-209ENST00000576012 VSIG2Q96IQ7 327 aa10.64□□□□□ -0.71
SCARF1-209ENST00000576012 GAGE2AQ6NT46 116 aa10.64□□□□□ -0.71
SCARF1-209ENST00000576012 Q9H8V8 135 aa10.64□□□□□ -0.71
SCARF1-209ENST00000576012 TRAV13-1A0A0B4J241 112 aa10.64□□□□□ -0.71
SCARF1-209ENST00000576012 IGHV3OR16-12A0A075B7B8 117 aa10.63□□□□□ -0.71
SCARF1-209ENST00000576012 H3BT86 120 aa10.63□□□□□ -0.71
SCARF1-209ENST00000576012 LINC00467Q9BRT7 94 aa10.63□□□□□ -0.71
SCARF1-209ENST00000576012 EPG5Q9HCE0 2579 aa10.63□□□□□ -0.71
SCARF1-209ENST00000576012 ZNF462Q96JM2 2506 aa10.63□□□□□ -0.71
SCARF1-209ENST00000576012 IGHG2P01859 326 aa10.63□□□□□ -0.71
SCARF1-209ENST00000576012 Q6Q795 121 aa10.63□□□□□ -0.71
SCARF1-209ENST00000576012 FAM104AQ969W3 186 aa10.63□□□□□ -0.71
SCARF1-209ENST00000576012 C9orf85Q96MD7 179 aa10.63□□□□□ -0.71
SCARF1-209ENST00000576012 IGKV3OR2-268A0A0C4DH90 116 aa10.62□□□□□ -0.71
SCARF1-209ENST00000576012 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms