RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 H7C1H1 209 aa6.76□□□□□ -1.33
GTF3C1-213ENST00000571886 XGP55808 180 aa6.76□□□□□ -1.33
GTF3C1-213ENST00000571886 RBX1P62877 108 aa6.76□□□□□ -1.33
GTF3C1-213ENST00000571886 IQCJQ1A5X6 159 aa6.76□□□□□ -1.33
GTF3C1-213ENST00000571886 CDPF1Q6NVV7 123 aa6.76□□□□□ -1.33
GTF3C1-213ENST00000571886 RNF185Q96GF1 192 aa6.76□□□□□ -1.33
GTF3C1-213ENST00000571886 CHCHD7Q9BUK0 85 aa6.76□□□□□ -1.33
GTF3C1-213ENST00000571886 TM2D2Q9BX73 214 aa6.76□□□□□ -1.33
GTF3C1-213ENST00000571886 TRBV25-1A0A075B6N4 114 aa6.75□□□□□ -1.33
GTF3C1-213ENST00000571886 IGKV2D-24A0A075B6R9 120 aa6.75□□□□□ -1.33
GTF3C1-213ENST00000571886 IGHV1-24A0A0C4DH33 117 aa6.75□□□□□ -1.33
GTF3C1-213ENST00000571886 ANGP03950 147 aaKnown RBP6.75□□□□□ -1.33
GTF3C1-213ENST00000571886 ADIRFQ15847 76 aa6.75□□□□□ -1.33
GTF3C1-213ENST00000571886 CBLN2Q8IUK8 224 aa6.75□□□□□ -1.33
GTF3C1-213ENST00000571886 NUP35Q8NFH5 326 aa6.75□□□□□ -1.33
GTF3C1-213ENST00000571886 GFRA4Q9GZZ7 299 aa6.75□□□□□ -1.33
GTF3C1-213ENST00000571886 RPS10P5Q9NQ39 176 aa6.75□□□□□ -1.33
GTF3C1-213ENST00000571886 NAT8Q9UHE5 227 aa6.75□□□□□ -1.33
GTF3C1-213ENST00000571886 IGLV4-60A0A075B6I1 120 aa6.74□□□□□ -1.33
GTF3C1-213ENST00000571886 A0A1B0GUT8 65 aa6.74□□□□□ -1.33
GTF3C1-213ENST00000571886 GCSHP23434 173 aa6.74□□□□□ -1.33
GTF3C1-213ENST00000571886 ELOBQ15370 118 aa6.74□□□□□ -1.33
GTF3C1-213ENST00000571886 TMEM97Q5BJF2 176 aa6.74□□□□□ -1.33
GTF3C1-213ENST00000571886 CLPSL2Q6UWE3 100 aa6.74□□□□□ -1.33
GTF3C1-213ENST00000571886 C20orf203Q8NBC4 194 aa6.74□□□□□ -1.33
GTF3C1-213ENST00000571886 TMEM242Q9NWH2 141 aa6.74□□□□□ -1.33
GTF3C1-213ENST00000571886 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.73□□□□□ -1.33
GTF3C1-213ENST00000571886 IGLV5-52A0A0A0MRZ9 124 aa6.73□□□□□ -1.33
GTF3C1-213ENST00000571886 FAM231BA6NCW3 169 aa6.73□□□□□ -1.33
GTF3C1-213ENST00000571886 C1orf196B1AJZ1 125 aa6.73□□□□□ -1.33
GTF3C1-213ENST00000571886 RAB4AP20338 218 aa6.73□□□□□ -1.33
GTF3C1-213ENST00000571886 RPS10P46783 165 aaKnown RBP6.73□□□□□ -1.33
GTF3C1-213ENST00000571886 RAB5BP61020 215 aa6.73□□□□□ -1.33
GTF3C1-213ENST00000571886 HAMPP81172 84 aa6.73□□□□□ -1.33
GTF3C1-213ENST00000571886 PNRC1Q12796 327 aaPredicted RBP6.73□□□□□ -1.33
GTF3C1-213ENST00000571886 KRTAP26-1Q6PEX3 210 aa6.73□□□□□ -1.33
GTF3C1-213ENST00000571886 KCNIP4Q6PIL6 250 aa6.73□□□□□ -1.33
GTF3C1-213ENST00000571886 AMN1Q8IY45 258 aa6.73□□□□□ -1.33
GTF3C1-213ENST00000571886 LINC00269Q8N2A0 174 aa6.73□□□□□ -1.33
GTF3C1-213ENST00000571886 TMEM243Q9BU79 118 aa6.73□□□□□ -1.33
GTF3C1-213ENST00000571886 TMEM191AQ9H0A3 160 aa6.73□□□□□ -1.33
GTF3C1-213ENST00000571886 PRR34Q9NV39 138 aa6.73□□□□□ -1.33
GTF3C1-213ENST00000571886 FAM30AQ9NZY2 134 aa6.73□□□□□ -1.33
GTF3C1-213ENST00000571886 SMIM27A0A1W2PRY6 76 aa6.72□□□□□ -1.33
GTF3C1-213ENST00000571886 SMKR1H3BMG3 65 aa6.72□□□□□ -1.33
GTF3C1-213ENST00000571886 Q0VG73 95 aa6.72□□□□□ -1.33
GTF3C1-213ENST00000571886 COTL1Q14019 142 aa6.72□□□□□ -1.33
GTF3C1-213ENST00000571886 LINC01620Q4KN68 170 aa6.72□□□□□ -1.33
GTF3C1-213ENST00000571886 SMIM15Q7Z3B0 74 aa6.72□□□□□ -1.33
GTF3C1-213ENST00000571886 FRZBQ92765 325 aa6.72□□□□□ -1.33
GTF3C1-213ENST00000571886 YPEL4Q96NS1 127 aa6.72□□□□□ -1.33
GTF3C1-213ENST00000571886 SDHAF1A6NFY7 115 aa6.71□□□□□ -1.34
GTF3C1-213ENST00000571886 RAB5AP20339 215 aa6.71□□□□□ -1.34
GTF3C1-213ENST00000571886 AMTP48728 403 aa6.71□□□□□ -1.34
GTF3C1-213ENST00000571886 RIGQ13278 110 aa6.71□□□□□ -1.34
GTF3C1-213ENST00000571886 NTN5Q8WTR8 489 aaPredicted RBP6.71□□□□□ -1.34
GTF3C1-213ENST00000571886 BORCS7Q96B45 105 aa6.71□□□□□ -1.34
GTF3C1-213ENST00000571886 RMI2Q96E14 147 aa6.71□□□□□ -1.34
GTF3C1-213ENST00000571886 CTDSP1Q9GZU7 261 aa6.71□□□□□ -1.34
GTF3C1-213ENST00000571886 COX11Q9Y6N1 276 aa6.71□□□□□ -1.34
GTF3C1-213ENST00000571886 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.7□□□□□ -1.34
GTF3C1-213ENST00000571886 TRBV6-5A0A0K0K1A5 114 aa6.7□□□□□ -1.34
GTF3C1-213ENST00000571886 A0A1B0GUV1 79 aa6.7□□□□□ -1.34
GTF3C1-213ENST00000571886 IGKV2-29A2NJV5 120 aaPredicted RBP6.7□□□□□ -1.34
GTF3C1-213ENST00000571886 NCR2O95944 276 aa6.7□□□□□ -1.34
GTF3C1-213ENST00000571886 CRPP02741 224 aa6.7□□□□□ -1.34
GTF3C1-213ENST00000571886 PKIAP61925 76 aa6.7□□□□□ -1.34
GTF3C1-213ENST00000571886 LINC00518Q8N0U6 118 aa6.7□□□□□ -1.34
GTF3C1-213ENST00000571886 Q8N1X5 172 aa6.7□□□□□ -1.34
GTF3C1-213ENST00000571886 C1orf43Q9BWL3 253 aa6.7□□□□□ -1.34
GTF3C1-213ENST00000571886 NAT8BQ9UHF3 227 aa6.7□□□□□ -1.34
GTF3C1-213ENST00000571886 DNAH8Q96JB1 4490 aa6.7□□□□□ -1.34
GTF3C1-213ENST00000571886 IGLV10-54A0A075B6I4 117 aa6.69□□□□□ -1.34
GTF3C1-213ENST00000571886 C5orf52A6NGY3 159 aa6.69□□□□□ -1.34
GTF3C1-213ENST00000571886 TSHBP01222 138 aa6.69□□□□□ -1.34
GTF3C1-213ENST00000571886 HLA-DQA1P01909 254 aa6.69□□□□□ -1.34
GTF3C1-213ENST00000571886 PMCHP20382 165 aa6.69□□□□□ -1.34
GTF3C1-213ENST00000571886 CAMPP49913 170 aa6.69□□□□□ -1.34
GTF3C1-213ENST00000571886 POLR2KP53803 58 aaKnown RBP6.69□□□□□ -1.34
GTF3C1-213ENST00000571886 REG3AQ06141 175 aa6.69□□□□□ -1.34
GTF3C1-213ENST00000571886 MIAQ16674 131 aa6.69□□□□□ -1.34
GTF3C1-213ENST00000571886 NRACQ8N912 160 aa6.69□□□□□ -1.34
GTF3C1-213ENST00000571886 TMEM70Q9BUB7 260 aa6.69□□□□□ -1.34
GTF3C1-213ENST00000571886 I3L3M4 83 aa6.68□□□□□ -1.34
GTF3C1-213ENST00000571886 UBE2L6O14933 153 aa6.68□□□□□ -1.34
GTF3C1-213ENST00000571886 SMR3BP02814 79 aaPredicted RBP6.68□□□□□ -1.34
GTF3C1-213ENST00000571886 MRPL51Q4U2R6 128 aaKnown RBP6.68□□□□□ -1.34
GTF3C1-213ENST00000571886 FAM104BQ5XKR9 115 aa6.68□□□□□ -1.34
GTF3C1-213ENST00000571886 MRAP2Q96G30 205 aa6.68□□□□□ -1.34
GTF3C1-213ENST00000571886 ST20Q9HBF5 79 aa6.68□□□□□ -1.34
GTF3C1-213ENST00000571886 A0A1B0GXF2 115 aa6.67□□□□□ -1.34
GTF3C1-213ENST00000571886 USP17L23D6RBM5 183 aa6.67□□□□□ -1.34
GTF3C1-213ENST00000571886 S100A8P05109 93 aa6.67□□□□□ -1.34
GTF3C1-213ENST00000571886 ESDP10768 282 aa6.67□□□□□ -1.34
GTF3C1-213ENST00000571886 MRPL54Q6P161 138 aaKnown RBP6.67□□□□□ -1.34
GTF3C1-213ENST00000571886 TRBV24-1A0A075B6N3 115 aa6.66□□□□□ -1.34
GTF3C1-213ENST00000571886 IGKV3OR2-268A0A0C4DH90 116 aa6.66□□□□□ -1.34
GTF3C1-213ENST00000571886 APCSP02743 223 aa6.66□□□□□ -1.34
GTF3C1-213ENST00000571886 S100A6P06703 90 aa6.66□□□□□ -1.34
GTF3C1-213ENST00000571886 PRSS1P07477 247 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms