RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 RNF185Q96GF1 192 aa12.11□□□□□ -0.47
SCARF1-204ENST00000570902 FAM210AQ96ND0 272 aa12.11□□□□□ -0.47
SCARF1-204ENST00000570902 AP1S3Q96PC3 154 aa12.11□□□□□ -0.47
SCARF1-204ENST00000570902 NTM-AS1Q6ZSK4 140 aa12.1□□□□□ -0.47
SCARF1-204ENST00000570902 RNASE7Q9H1E1 156 aaKnown RBP12.1□□□□□ -0.47
SCARF1-204ENST00000570902 DPH3P1Q9H4G8 78 aa12.1□□□□□ -0.47
SCARF1-204ENST00000570902 TRBV25-1A0A075B6N4 114 aa12.09□□□□□ -0.47
SCARF1-204ENST00000570902 IGHV3-64A0A075B6Q5 118 aa12.09□□□□□ -0.47
SCARF1-204ENST00000570902 hDV102S1A0JD36 115 aa12.09□□□□□ -0.47
SCARF1-204ENST00000570902 LRP2P98164 4655 aa12.09□□□□□ -0.47
SCARF1-204ENST00000570902 GAGE6Q13070 117 aa12.09□□□□□ -0.47
SCARF1-204ENST00000570902 KIF25-AS1Q9Y6Z4 181 aa12.09□□□□□ -0.47
SCARF1-204ENST00000570902 RNF213Q63HN8 5207 aa12.09□□□□□ -0.47
SCARF1-204ENST00000570902 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.08□□□□□ -0.48
SCARF1-204ENST00000570902 MGPP08493 103 aa12.08□□□□□ -0.48
SCARF1-204ENST00000570902 CACNG7P62955 275 aa12.08□□□□□ -0.48
SCARF1-204ENST00000570902 LYZL1Q6UWQ5 148 aa12.08□□□□□ -0.48
SCARF1-204ENST00000570902 AP5S1Q9NUS5 200 aa12.08□□□□□ -0.48
SCARF1-204ENST00000570902 F2Z2F3 143 aa12.07□□□□□ -0.48
SCARF1-204ENST00000570902 NDUFS6O75380 124 aaKnown RBP12.07□□□□□ -0.48
SCARF1-204ENST00000570902 SRP19P09132 144 aaKnown RBP12.07□□□□□ -0.48
SCARF1-204ENST00000570902 REG3AQ06141 175 aa12.07□□□□□ -0.48
SCARF1-204ENST00000570902 RPP21Q9H633 154 aaKnown RBP12.07□□□□□ -0.48
SCARF1-204ENST00000570902 TNXBP22105 4242 aa12.07□□□□□ -0.48
SCARF1-204ENST00000570902 A0A087WYN8 130 aa12.06□□□□□ -0.48
SCARF1-204ENST00000570902 TRAV8-4A0A0B4J246 113 aa12.06□□□□□ -0.48
SCARF1-204ENST00000570902 IQCJQ1A5X6 159 aa12.06□□□□□ -0.48
SCARF1-204ENST00000570902 SMIM7Q9BQ49 75 aa12.06□□□□□ -0.48
SCARF1-204ENST00000570902 IGLV10-54A0A075B6I4 117 aa12.05□□□□□ -0.48
SCARF1-204ENST00000570902 ZNF727A8MUV8 499 aa12.05□□□□□ -0.48
SCARF1-204ENST00000570902 SPACA4Q8TDM5 124 aa12.05□□□□□ -0.48
SCARF1-204ENST00000570902 C7orf33Q8WU49 177 aa12.05□□□□□ -0.48
SCARF1-204ENST00000570902 IGHV1-24A0A0C4DH33 117 aa12.04□□□□□ -0.48
SCARF1-204ENST00000570902 NTF3P20783 257 aa12.04□□□□□ -0.48
SCARF1-204ENST00000570902 C9JQL5 133 aa12.03□□□□□ -0.48
SCARF1-204ENST00000570902 GATCO43716 136 aaKnown RBP12.03□□□□□ -0.48
SCARF1-204ENST00000570902 TRGC1P0CF51 173 aa12.03□□□□□ -0.48
SCARF1-204ENST00000570902 CTRLP40313 264 aa12.03□□□□□ -0.48
SCARF1-204ENST00000570902 FAM231DQ6ZW35 169 aa12.03□□□□□ -0.48
SCARF1-204ENST00000570902 CHTF8P0CG12 524 aa12.02□□□□□ -0.49
SCARF1-204ENST00000570902 TWIST1Q15672 202 aa12.02□□□□□ -0.49
SCARF1-204ENST00000570902 SUMO4Q6EEV6 95 aa12.02□□□□□ -0.49
SCARF1-204ENST00000570902 LINC01551Q86U37 167 aa12.02□□□□□ -0.49
SCARF1-204ENST00000570902 GTSF1Q8WW33 167 aa12.02□□□□□ -0.49
SCARF1-204ENST00000570902 PLAC8Q9NZF1 115 aa12.02□□□□□ -0.49
SCARF1-204ENST00000570902 M0QY20 66 aa12.01□□□□□ -0.49
SCARF1-204ENST00000570902 PHOX2AO14813 284 aa12.01□□□□□ -0.49
SCARF1-204ENST00000570902 SRSF3P84103 164 aaKnown RBP12.01□□□□□ -0.49
SCARF1-204ENST00000570902 WDR73Q6P4I2 378 aa12.01□□□□□ -0.49
SCARF1-204ENST00000570902 A0A1B0GUV1 79 aa12□□□□□ -0.49
SCARF1-204ENST00000570902 H7C1H1 209 aa12□□□□□ -0.49
SCARF1-204ENST00000570902 SLPIP03973 132 aa12□□□□□ -0.49
SCARF1-204ENST00000570902 PEA15Q15121 130 aa12□□□□□ -0.49
SCARF1-204ENST00000570902 C20orf203Q8NBC4 194 aa12□□□□□ -0.49
SCARF1-204ENST00000570902 LINC01600Q96MT4 127 aa12□□□□□ -0.49
SCARF1-204ENST00000570902 CNFNQ9BYD5 112 aa12□□□□□ -0.49
SCARF1-204ENST00000570902 A8MWL6 223 aa11.98□□□□□ -0.49
SCARF1-204ENST00000570902 TMEM241Q24JQ0 296 aa11.98□□□□□ -0.49
SCARF1-204ENST00000570902 FAM74A3Q4VXF1 159 aa11.98□□□□□ -0.49
SCARF1-204ENST00000570902 TMEM243Q9BU79 118 aa11.98□□□□□ -0.49
SCARF1-204ENST00000570902 CT83Q5H943 113 aa11.97□□□□□ -0.49
SCARF1-204ENST00000570902 CFAP161Q6P656 301 aa11.97□□□□□ -0.49
SCARF1-204ENST00000570902 RASL11AQ6T310 242 aa11.97□□□□□ -0.49
SCARF1-204ENST00000570902 PGLYRP4Q96LB8 373 aa11.97□□□□□ -0.49
SCARF1-204ENST00000570902 SMDT1Q9H4I9 107 aa11.97□□□□□ -0.49
SCARF1-204ENST00000570902 OSTCQ9NRP0 149 aa11.97□□□□□ -0.49
SCARF1-204ENST00000570902 IGLV4-60A0A075B6I1 120 aa11.96□□□□□ -0.49
SCARF1-204ENST00000570902 FOXA3P55318 350 aaPredicted RBP11.95□□□□□ -0.5
SCARF1-204ENST00000570902 RPL23P62829 140 aaKnown RBP11.95□□□□□ -0.5
SCARF1-204ENST00000570902 PRR3P79522 188 aaKnown RBP11.95□□□□□ -0.5
SCARF1-204ENST00000570902 COX6A2Q02221 97 aa11.95□□□□□ -0.5
SCARF1-204ENST00000570902 SMIM15Q7Z3B0 74 aa11.95□□□□□ -0.5
SCARF1-204ENST00000570902 ISOC2Q96AB3 205 aa11.95□□□□□ -0.5
SCARF1-204ENST00000570902 NIT2Q9NQR4 276 aa11.95□□□□□ -0.5
SCARF1-204ENST00000570902 TRAV26-2A0A0B4J265 109 aa11.94□□□□□ -0.5
SCARF1-204ENST00000570902 UBE2L6O14933 153 aa11.94□□□□□ -0.5
SCARF1-204ENST00000570902 TSKUQ8WUA8 353 aa11.94□□□□□ -0.5
SCARF1-204ENST00000570902 GFRA4Q9GZZ7 299 aa11.94□□□□□ -0.5
SCARF1-204ENST00000570902 NAT8Q9UHE5 227 aa11.94□□□□□ -0.5
SCARF1-204ENST00000570902 RPS10P46783 165 aaKnown RBP11.93□□□□□ -0.5
SCARF1-204ENST00000570902 RAB14P61106 215 aa11.93□□□□□ -0.5
SCARF1-204ENST00000570902 ADIRFQ15847 76 aa11.93□□□□□ -0.5
SCARF1-204ENST00000570902 MAJINQ3KP22 176 aa11.93□□□□□ -0.5
SCARF1-204ENST00000570902 GATD1Q8NB37 220 aa11.93□□□□□ -0.5
SCARF1-204ENST00000570902 V9GYV3 84 aa11.93□□□□□ -0.5
SCARF1-204ENST00000570902 A0A0J9YXV3 536 aa11.92□□□□□ -0.5
SCARF1-204ENST00000570902 HIGD1CA8MV81 97 aa11.92□□□□□ -0.5
SCARF1-204ENST00000570902 C15orf56Q8N910 161 aa11.92□□□□□ -0.5
SCARF1-204ENST00000570902 BORCS7Q96B45 105 aa11.92□□□□□ -0.5
SCARF1-204ENST00000570902 IGKV2-24A0A0C4DH68 120 aa11.91□□□□□ -0.5
SCARF1-204ENST00000570902 REG3GQ6UW15 175 aa11.91□□□□□ -0.5
SCARF1-204ENST00000570902 FAM231BA6NCW3 169 aa11.9□□□□□ -0.5
SCARF1-204ENST00000570902 GAGE12HA6NDE8 117 aa11.9□□□□□ -0.5
SCARF1-204ENST00000570902 STPG4Q8N801 248 aa11.9□□□□□ -0.5
SCARF1-204ENST00000570902 A0A1B0GUT8 65 aa11.89□□□□□ -0.51
SCARF1-204ENST00000570902 COTL1Q14019 142 aa11.89□□□□□ -0.51
SCARF1-204ENST00000570902 SPINK6Q6UWN8 80 aa11.89□□□□□ -0.51
SCARF1-204ENST00000570902 PRSS3P2Q8NHM4 247 aa11.89□□□□□ -0.51
SCARF1-204ENST00000570902 RPL39LQ96EH5 51 aaKnown RBP11.89□□□□□ -0.51
SCARF1-204ENST00000570902 AMTP48728 403 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms