RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 BIN3Q9NQY0 253 aa8.15□□□□□ -1.1
CTDNEP1-205ENST00000570828 VAX2Q9UIW0 290 aa8.15□□□□□ -1.1
CTDNEP1-205ENST00000570828 SRRM2Q9UQ35 2752 aaKnown RBP8.14□□□□□ -1.11
CTDNEP1-205ENST00000570828 VPS13BQ7Z7G8 4022 aa8.14□□□□□ -1.11
CTDNEP1-205ENST00000570828 H7C1H1 209 aa8.14□□□□□ -1.11
CTDNEP1-205ENST00000570828 ANGP03950 147 aaKnown RBP8.14□□□□□ -1.11
CTDNEP1-205ENST00000570828 TAGLN2P37802 199 aaKnown RBP8.14□□□□□ -1.11
CTDNEP1-205ENST00000570828 ATRAIDQ6UW56 229 aa8.14□□□□□ -1.11
CTDNEP1-205ENST00000570828 FAM30AQ9NZY2 134 aa8.14□□□□□ -1.11
CTDNEP1-205ENST00000570828 KIF25-AS1Q9Y6Z4 181 aa8.14□□□□□ -1.11
CTDNEP1-205ENST00000570828 TRBV20OR9-2A0A075B6H5 130 aa8.13□□□□□ -1.11
CTDNEP1-205ENST00000570828 F2Z2F3 143 aa8.13□□□□□ -1.11
CTDNEP1-205ENST00000570828 AKAP14Q86UN6 197 aa8.13□□□□□ -1.11
CTDNEP1-205ENST00000570828 DMBT1Q9UGM3 2413 aaPredicted RBP8.13□□□□□ -1.11
CTDNEP1-205ENST00000570828 TRBV25-1A0A075B6N4 114 aa8.12□□□□□ -1.11
CTDNEP1-205ENST00000570828 M0QY20 66 aa8.12□□□□□ -1.11
CTDNEP1-205ENST00000570828 TRGC1P0CF51 173 aa8.12□□□□□ -1.11
CTDNEP1-205ENST00000570828 C14orf177Q52M58 125 aa8.12□□□□□ -1.11
CTDNEP1-205ENST00000570828 SUMO4Q6EEV6 95 aa8.12□□□□□ -1.11
CTDNEP1-205ENST00000570828 ENHOQ6UWT2 76 aa8.12□□□□□ -1.11
CTDNEP1-205ENST00000570828 Q6ZSA8 131 aa8.12□□□□□ -1.11
CTDNEP1-205ENST00000570828 NTM-AS1Q6ZSK4 140 aa8.12□□□□□ -1.11
CTDNEP1-205ENST00000570828 MYCBP2O75592 4640 aa8.12□□□□□ -1.11
CTDNEP1-205ENST00000570828 DNAH8Q96JB1 4490 aa8.11□□□□□ -1.11
CTDNEP1-205ENST00000570828 IGHV1-24A0A0C4DH33 117 aa8.11□□□□□ -1.11
CTDNEP1-205ENST00000570828 GAGE6Q13070 117 aa8.11□□□□□ -1.11
CTDNEP1-205ENST00000570828 MIAQ16674 131 aa8.11□□□□□ -1.11
CTDNEP1-205ENST00000570828 LYZL1Q6UWQ5 148 aa8.11□□□□□ -1.11
CTDNEP1-205ENST00000570828 HERC1Q15751 4861 aa8.1□□□□□ -1.11
CTDNEP1-205ENST00000570828 HLA-DQA1P01909 254 aa8.1□□□□□ -1.11
CTDNEP1-205ENST00000570828 CTRLP40313 264 aa8.1□□□□□ -1.11
CTDNEP1-205ENST00000570828 NKX2-5P52952 324 aaPredicted RBP8.1□□□□□ -1.11
CTDNEP1-205ENST00000570828 RBX1P62877 108 aa8.1□□□□□ -1.11
CTDNEP1-205ENST00000570828 IQCJQ1A5X6 159 aa8.1□□□□□ -1.11
CTDNEP1-205ENST00000570828 LINC01620Q4KN68 170 aa8.1□□□□□ -1.11
CTDNEP1-205ENST00000570828 RASL11AQ6T310 242 aa8.1□□□□□ -1.11
CTDNEP1-205ENST00000570828 C9orf62Q8N4C0 152 aa8.1□□□□□ -1.11
CTDNEP1-205ENST00000570828 DPH3P1Q9H4G8 78 aa8.1□□□□□ -1.11
CTDNEP1-205ENST00000570828 RPP21Q9H633 154 aaKnown RBP8.1□□□□□ -1.11
CTDNEP1-205ENST00000570828 NTF3P20783 257 aa8.09□□□□□ -1.11
CTDNEP1-205ENST00000570828 CLPSL2Q6UWE3 100 aa8.09□□□□□ -1.11
CTDNEP1-205ENST00000570828 NUDT10Q8NFP7 164 aa8.09□□□□□ -1.11
CTDNEP1-205ENST00000570828 NUDT11Q96G61 164 aa8.09□□□□□ -1.11
CTDNEP1-205ENST00000570828 USP17L23D6RBM5 183 aa8.08□□□□□ -1.12
CTDNEP1-205ENST00000570828 PLA2G1BP04054 148 aaKnown RBP8.08□□□□□ -1.12
CTDNEP1-205ENST00000570828 BLOC1S1P78537 153 aa8.08□□□□□ -1.12
CTDNEP1-205ENST00000570828 TWIST1Q15672 202 aa8.08□□□□□ -1.12
CTDNEP1-205ENST00000570828 ALKAL2Q6UX46 152 aa8.08□□□□□ -1.12
CTDNEP1-205ENST00000570828 LINC00269Q8N2A0 174 aa8.08□□□□□ -1.12
CTDNEP1-205ENST00000570828 RNASE7Q9H1E1 156 aaKnown RBP8.08□□□□□ -1.12
CTDNEP1-205ENST00000570828 PRR34Q9NV39 138 aa8.08□□□□□ -1.12
CTDNEP1-205ENST00000570828 K7EN84 100 aa8.07□□□□□ -1.12
CTDNEP1-205ENST00000570828 LINC00310P59036 64 aa8.07□□□□□ -1.12
CTDNEP1-205ENST00000570828 SCXQ7RTU7 201 aa8.07□□□□□ -1.12
CTDNEP1-205ENST00000570828 TMEM243Q9BU79 118 aa8.07□□□□□ -1.12
CTDNEP1-205ENST00000570828 CNFNQ9BYD5 112 aa8.07□□□□□ -1.12
CTDNEP1-205ENST00000570828 NIT2Q9NQR4 276 aa8.07□□□□□ -1.12
CTDNEP1-205ENST00000570828 FLG2Q5D862 2391 aaPredicted RBP8.06□□□□□ -1.12
CTDNEP1-205ENST00000570828 TMEM250H0YL14 139 aa8.06□□□□□ -1.12
CTDNEP1-205ENST00000570828 UBE2L6O14933 153 aa8.06□□□□□ -1.12
CTDNEP1-205ENST00000570828 COTL1Q14019 142 aa8.06□□□□□ -1.12
CTDNEP1-205ENST00000570828 SMIM15Q7Z3B0 74 aa8.06□□□□□ -1.12
CTDNEP1-205ENST00000570828 OCC1Q8TAD7 63 aa8.06□□□□□ -1.12
CTDNEP1-205ENST00000570828 PGLYRP4Q96LB8 373 aa8.06□□□□□ -1.12
CTDNEP1-205ENST00000570828 AMTP48728 403 aa8.05□□□□□ -1.12
CTDNEP1-205ENST00000570828 CEBPGP53567 150 aa8.05□□□□□ -1.12
CTDNEP1-205ENST00000570828 REG3AQ06141 175 aa8.05□□□□□ -1.12
CTDNEP1-205ENST00000570828 CHAC1Q9BUX1 264 aa8.05□□□□□ -1.12
CTDNEP1-205ENST00000570828 IGLV10-54A0A075B6I4 117 aa8.04□□□□□ -1.12
CTDNEP1-205ENST00000570828 C20orf203Q8NBC4 194 aa8.04□□□□□ -1.12
CTDNEP1-205ENST00000570828 DEFB104AQ8WTQ1 72 aa8.04□□□□□ -1.12
CTDNEP1-205ENST00000570828 GTSF1Q8WW33 167 aa8.04□□□□□ -1.12
CTDNEP1-205ENST00000570828 TRAV26-2A0A0B4J265 109 aa8.03□□□□□ -1.12
CTDNEP1-205ENST00000570828 A0A1B0GUV1 79 aa8.03□□□□□ -1.12
CTDNEP1-205ENST00000570828 A8MWL6 223 aa8.03□□□□□ -1.12
CTDNEP1-205ENST00000570828 GATCO43716 136 aaKnown RBP8.03□□□□□ -1.12
CTDNEP1-205ENST00000570828 PRSS1P07477 247 aa8.03□□□□□ -1.12
CTDNEP1-205ENST00000570828 PTTG1IPP53801 180 aa8.03□□□□□ -1.12
CTDNEP1-205ENST00000570828 IGLV4-60A0A075B6I1 120 aa8.02□□□□□ -1.13
CTDNEP1-205ENST00000570828 TRAV8-4A0A0B4J246 113 aa8.02□□□□□ -1.13
CTDNEP1-205ENST00000570828 KRTAP26-1Q6PEX3 210 aa8.02□□□□□ -1.13
CTDNEP1-205ENST00000570828 FAM231DQ6ZW35 169 aa8.02□□□□□ -1.13
CTDNEP1-205ENST00000570828 GATD1Q8NB37 220 aa8.02□□□□□ -1.13
CTDNEP1-205ENST00000570828 LYPD6BQ8NI32 183 aa8.02□□□□□ -1.13
CTDNEP1-205ENST00000570828 CIRBP-AS1Q8TBR5 109 aa8.02□□□□□ -1.13
CTDNEP1-205ENST00000570828 SMIM7Q9BQ49 75 aa8.02□□□□□ -1.13
CTDNEP1-205ENST00000570828 KRTAP9-8Q9BYQ0 159 aa8.02□□□□□ -1.13
CTDNEP1-205ENST00000570828 EIF5A2Q9GZV4 153 aaKnown RBP8.02□□□□□ -1.13
CTDNEP1-205ENST00000570828 TEX261Q6UWH6 196 aa8.01□□□□□ -1.13
CTDNEP1-205ENST00000570828 BORCS7Q96B45 105 aa8.01□□□□□ -1.13
CTDNEP1-205ENST00000570828 AMMECR1LQ6DCA0 310 aa8□□□□□ -1.13
CTDNEP1-205ENST00000570828 RPL39LQ96EH5 51 aaKnown RBP8□□□□□ -1.13
CTDNEP1-205ENST00000570828 CTDSP1Q9GZU7 261 aa8□□□□□ -1.13
CTDNEP1-205ENST00000570828 GFRA4Q9GZZ7 299 aa8□□□□□ -1.13
CTDNEP1-205ENST00000570828 hDV102S1A0JD36 115 aa7.99□□□□□ -1.13
CTDNEP1-205ENST00000570828 NCR2O95944 276 aa7.99□□□□□ -1.13
CTDNEP1-205ENST00000570828 APCSP02743 223 aa7.99□□□□□ -1.13
CTDNEP1-205ENST00000570828 FOXA3P55318 350 aaPredicted RBP7.99□□□□□ -1.13
CTDNEP1-205ENST00000570828 C9orf163Q8N9P6 203 aa7.99□□□□□ -1.13
CTDNEP1-205ENST00000570828 IGKV3OR2-268A0A0C4DH90 116 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 155.5 ms