RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 TFF3Q07654 80 aa3.19□□□□□ -1.9
UBR1-208ENST00000569066 RHOHQ15669 191 aa3.19□□□□□ -1.9
UBR1-208ENST00000569066 KRTAP13-2Q52LG2 175 aa3.19□□□□□ -1.9
UBR1-208ENST00000569066 RPRMLQ8N4K4 120 aa3.19□□□□□ -1.9
UBR1-208ENST00000569066 TMEM75Q8N9X5 138 aa3.19□□□□□ -1.9
UBR1-208ENST00000569066 LCE3DQ9BYE3 92 aa3.19□□□□□ -1.9
UBR1-208ENST00000569066 PRR14LQ5THK1 2151 aa3.18□□□□□ -1.9
UBR1-208ENST00000569066 TRBV10-2A0A0K0K1G8 114 aa3.18□□□□□ -1.9
UBR1-208ENST00000569066 FGF12P61328 243 aa3.18□□□□□ -1.9
UBR1-208ENST00000569066 HBBP68871 147 aa3.18□□□□□ -1.9
UBR1-208ENST00000569066 FAM229BQ4G0N7 80 aa3.18□□□□□ -1.9
UBR1-208ENST00000569066 PSMG4Q5JS54 123 aa3.18□□□□□ -1.9
UBR1-208ENST00000569066 FAM19A3Q7Z5A8 133 aa3.18□□□□□ -1.9
UBR1-208ENST00000569066 Q8N8P6 123 aa3.18□□□□□ -1.9
UBR1-208ENST00000569066 KLF14Q8TD94 323 aaPredicted RBP3.18□□□□□ -1.9
UBR1-208ENST00000569066 IFI27L1Q96BM0 104 aa3.18□□□□□ -1.9
UBR1-208ENST00000569066 PSENENQ9NZ42 101 aa3.18□□□□□ -1.9
UBR1-208ENST00000569066 DIDO1Q9BTC0 2240 aaKnown RBP3.18□□□□□ -1.9
UBR1-208ENST00000569066 ALPK2Q86TB3 2170 aa3.18□□□□□ -1.9
UBR1-208ENST00000569066 FREM3P0C091 2139 aa3.18□□□□□ -1.9
UBR1-208ENST00000569066 IFI27P40305 119 aaPredicted RBP3.18□□□□□ -1.9
UBR1-208ENST00000569066 DAD1P61803 113 aa3.18□□□□□ -1.9
UBR1-208ENST00000569066 NPCDR1Q9BY65 106 aa3.18□□□□□ -1.9
UBR1-208ENST00000569066 LAMTOR3Q9UHA4 124 aa3.18□□□□□ -1.9
UBR1-208ENST00000569066 TNS1Q9HBL0 1735 aaKnown RBP3.18□□□□□ -1.9
UBR1-208ENST00000569066 ACYP1P07311 99 aa3.17□□□□□ -1.9
UBR1-208ENST00000569066 CXCL8P10145 99 aa3.17□□□□□ -1.9
UBR1-208ENST00000569066 ZNF137PP52743 207 aa3.17□□□□□ -1.9
UBR1-208ENST00000569066 SOSTDC1Q6X4U4 206 aa3.17□□□□□ -1.9
UBR1-208ENST00000569066 WFDC5Q8TCV5 224 aa3.17□□□□□ -1.9
UBR1-208ENST00000569066 LINC00588Q9Y4M8 146 aa3.17□□□□□ -1.9
UBR1-208ENST00000569066 E7EUB6 86 aa3.17□□□□□ -1.9
UBR1-208ENST00000569066 XCL1P47992 114 aa3.17□□□□□ -1.9
UBR1-208ENST00000569066 MRPS36P82909 103 aaKnown RBP3.17□□□□□ -1.9
UBR1-208ENST00000569066 SPANXN5Q5MJ07 72 aa3.17□□□□□ -1.9
UBR1-208ENST00000569066 C2orf82Q6UX34 121 aa3.17□□□□□ -1.9
UBR1-208ENST00000569066 LTBP4Q8N2S1 1624 aa3.16□□□□□ -1.9
UBR1-208ENST00000569066 A0A087WVE0 104 aa3.16□□□□□ -1.9
UBR1-208ENST00000569066 TRAV8-3A0A0A6YYJ7 113 aa3.16□□□□□ -1.9
UBR1-208ENST00000569066 A8MUN3 132 aa3.16□□□□□ -1.9
UBR1-208ENST00000569066 ZNF73O43830 326 aaPredicted RBP3.16□□□□□ -1.9
UBR1-208ENST00000569066 IGHV1-46P01743 117 aa3.16□□□□□ -1.9
UBR1-208ENST00000569066 ZNF80P51504 273 aaPredicted RBP3.16□□□□□ -1.9
UBR1-208ENST00000569066 C20orf197Q8N268 126 aa3.16□□□□□ -1.9
UBR1-208ENST00000569066 CENPFP49454 3210 aa3.16□□□□□ -1.9
UBR1-208ENST00000569066 KIAA1549LQ6ZVL6 1849 aa3.16□□□□□ -1.9
UBR1-208ENST00000569066 TMEM256-PLSCR3K7ERE1 68 aa3.16□□□□□ -1.9
UBR1-208ENST00000569066 HBDP02042 147 aa3.16□□□□□ -1.9
UBR1-208ENST00000569066 LGALS3P17931 250 aaKnown RBP3.16□□□□□ -1.9
UBR1-208ENST00000569066 ADM2Q7Z4H4 148 aa3.16□□□□□ -1.9
UBR1-208ENST00000569066 TAC3Q9UHF0 121 aa3.16□□□□□ -1.9
UBR1-208ENST00000569066 MGAMO43451 1857 aa3.15□□□□□ -1.9
UBR1-208ENST00000569066 TMEM30CPA0ZSE6 113 aa3.15□□□□□ -1.91
UBR1-208ENST00000569066 RTL8CO15255 209 aa3.15□□□□□ -1.91
UBR1-208ENST00000569066 HMGN2P05204 90 aaKnown RBP3.15□□□□□ -1.91
UBR1-208ENST00000569066 ATXN8Q156A1 80 aa3.15□□□□□ -1.91
UBR1-208ENST00000569066 SSC5DA1L4H1 1573 aa3.15□□□□□ -1.91
UBR1-208ENST00000569066 PLXNB2O15031 1838 aa3.15□□□□□ -1.91
UBR1-208ENST00000569066 IGKV1D-17A0A075B6S4 117 aa3.14□□□□□ -1.91
UBR1-208ENST00000569066 A0A0B4J2C4 111 aa3.14□□□□□ -1.91
UBR1-208ENST00000569066 TRBV27A0A0K0K1C4 114 aa3.14□□□□□ -1.91
UBR1-208ENST00000569066 EDDM3BP56851 147 aa3.14□□□□□ -1.91
UBR1-208ENST00000569066 PRO1854Q9UHT4 67 aa3.14□□□□□ -1.91
UBR1-208ENST00000569066 A0A1B0GWA3 101 aa3.14□□□□□ -1.91
UBR1-208ENST00000569066 IBA57-AS1B1ANH7 110 aa3.14□□□□□ -1.91
UBR1-208ENST00000569066 IGHV3-33P01772 117 aa3.14□□□□□ -1.91
UBR1-208ENST00000569066 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.14□□□□□ -1.91
UBR1-208ENST00000569066 IGFL1Q6UW32 110 aa3.14□□□□□ -1.91
UBR1-208ENST00000569066 ZNF818PQ6ZRF7 136 aa3.14□□□□□ -1.91
UBR1-208ENST00000569066 Q6ZS52 159 aa3.14□□□□□ -1.91
UBR1-208ENST00000569066 PCNX2A6NKB5 2137 aa3.14□□□□□ -1.91
UBR1-208ENST00000569066 ARHGAP32A7KAX9 2087 aa3.14□□□□□ -1.91
UBR1-208ENST00000569066 LST1O00453 97 aa3.13□□□□□ -1.91
UBR1-208ENST00000569066 COPS9Q8WXC6 57 aa3.13□□□□□ -1.91
UBR1-208ENST00000569066 TNRC6CQ9HCJ0 1690 aaKnown RBP3.13□□□□□ -1.91
UBR1-208ENST00000569066 FREM1Q5H8C1 2179 aa3.13□□□□□ -1.91
UBR1-208ENST00000569066 INTS1Q8N201 2190 aaKnown RBP3.13□□□□□ -1.91
UBR1-208ENST00000569066 C10orf142B7Z368 130 aa3.13□□□□□ -1.91
UBR1-208ENST00000569066 M0R381 172 aa3.13□□□□□ -1.91
UBR1-208ENST00000569066 TRGV3P03979 118 aa3.13□□□□□ -1.91
UBR1-208ENST00000569066 ZGRF1Q86YA3 2104 aa3.13□□□□□ -1.91
UBR1-208ENST00000569066 MRPL35Q9NZE8 188 aaKnown RBP3.13□□□□□ -1.91
UBR1-208ENST00000569066 THSD7AQ9UPZ6 1657 aa3.13□□□□□ -1.91
UBR1-208ENST00000569066 PDE4DIPQ5VU43 2346 aa3.12□□□□□ -1.91
UBR1-208ENST00000569066 NDUFB3O43676 98 aa3.12□□□□□ -1.91
UBR1-208ENST00000569066 SH2D1AO60880 128 aa3.12□□□□□ -1.91
UBR1-208ENST00000569066 CGB3P0DN86 165 aa3.12□□□□□ -1.91
UBR1-208ENST00000569066 CGB7P0DN87 165 aa3.12□□□□□ -1.91
UBR1-208ENST00000569066 HMGA1P17096 107 aaKnown RBP3.12□□□□□ -1.91
UBR1-208ENST00000569066 LINC00322Q6ZN03 302 aaPredicted RBP3.12□□□□□ -1.91
UBR1-208ENST00000569066 PHF5AQ7RTV0 110 aaKnown RBP3.12□□□□□ -1.91
UBR1-208ENST00000569066 R4GMQ9 66 aa3.12□□□□□ -1.91
UBR1-208ENST00000569066 DSCAML1Q8TD84 2053 aa3.12□□□□□ -1.91
UBR1-208ENST00000569066 H7C2G1 150 aa3.12□□□□□ -1.91
UBR1-208ENST00000569066 IGKV1-5P01602 117 aa3.12□□□□□ -1.91
UBR1-208ENST00000569066 IGHV3-30P01768 117 aa3.12□□□□□ -1.91
UBR1-208ENST00000569066 IGHV3-30-5P0DP03 117 aa3.12□□□□□ -1.91
UBR1-208ENST00000569066 TIMM21Q9BVV7 248 aa3.12□□□□□ -1.91
UBR1-208ENST00000569066 COL6A3P12111 3177 aa3.11□□□□□ -1.91
UBR1-208ENST00000569066 IGKV3D-7A0A0C4DH55 119 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms