RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 FER1L6-AS1Q8NA97 138 aa9.85□□□□□ -0.83
NME3-211ENST00000568561 TMEM243Q9BU79 118 aa9.85□□□□□ -0.83
NME3-211ENST00000568561 LINC00862A6NCI5 91 aa9.84□□□□□ -0.83
NME3-211ENST00000568561 H7C1H1 209 aa9.84□□□□□ -0.83
NME3-211ENST00000568561 CENPWQ5EE01 88 aa9.84□□□□□ -0.83
NME3-211ENST00000568561 OR2D3Q8NGH3 330 aa9.84□□□□□ -0.83
NME3-211ENST00000568561 SPACA4Q8TDM5 124 aa9.84□□□□□ -0.83
NME3-211ENST00000568561 AP5S1Q9NUS5 200 aa9.84□□□□□ -0.83
NME3-211ENST00000568561 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.83□□□□□ -0.84
NME3-211ENST00000568561 TRAV8-4A0A0B4J246 113 aa9.83□□□□□ -0.84
NME3-211ENST00000568561 P01737 135 aa9.83□□□□□ -0.84
NME3-211ENST00000568561 IGKV3OR2-268A0A0C4DH90 116 aa9.82□□□□□ -0.84
NME3-211ENST00000568561 PHOX2AO14813 284 aa9.82□□□□□ -0.84
NME3-211ENST00000568561 RASL11AQ6T310 242 aa9.82□□□□□ -0.84
NME3-211ENST00000568561 C15orf56Q8N910 161 aa9.82□□□□□ -0.84
NME3-211ENST00000568561 FAM210AQ96ND0 272 aa9.82□□□□□ -0.84
NME3-211ENST00000568561 MANBALQ9NQG1 85 aa9.82□□□□□ -0.84
NME3-211ENST00000568561 GNG13Q9P2W3 67 aa9.82□□□□□ -0.84
NME3-211ENST00000568561 A0A1B0GUV1 79 aa9.81□□□□□ -0.84
NME3-211ENST00000568561 RAB19A4D1S5 217 aa9.81□□□□□ -0.84
NME3-211ENST00000568561 GAGE12HA6NDE8 117 aa9.81□□□□□ -0.84
NME3-211ENST00000568561 IFNA1P01562 189 aa9.81□□□□□ -0.84
NME3-211ENST00000568561 BCL2P10415 239 aa9.81□□□□□ -0.84
NME3-211ENST00000568561 TAGLN2P37802 199 aaKnown RBP9.81□□□□□ -0.84
NME3-211ENST00000568561 AMTP48728 403 aa9.81□□□□□ -0.84
NME3-211ENST00000568561 ODF1Q14990 250 aa9.81□□□□□ -0.84
NME3-211ENST00000568561 C11orf52Q96A22 123 aa9.81□□□□□ -0.84
NME3-211ENST00000568561 C19orf71A6NCJ1 209 aa9.8□□□□□ -0.84
NME3-211ENST00000568561 UBE2L6O14933 153 aa9.8□□□□□ -0.84
NME3-211ENST00000568561 NDUFS6O75380 124 aaKnown RBP9.8□□□□□ -0.84
NME3-211ENST00000568561 CACNG7P62955 275 aa9.8□□□□□ -0.84
NME3-211ENST00000568561 COX6A2Q02221 97 aa9.8□□□□□ -0.84
NME3-211ENST00000568561 HIGD2BQ4VC39 106 aa9.8□□□□□ -0.84
NME3-211ENST00000568561 WDR73Q6P4I2 378 aa9.8□□□□□ -0.84
NME3-211ENST00000568561 RNF185Q96GF1 192 aa9.8□□□□□ -0.84
NME3-211ENST00000568561 IGKV2-24A0A0C4DH68 120 aa9.79□□□□□ -0.84
NME3-211ENST00000568561 RPS20P60866 119 aaKnown RBP9.79□□□□□ -0.84
NME3-211ENST00000568561 LYZL1Q6UWQ5 148 aa9.79□□□□□ -0.84
NME3-211ENST00000568561 PGLYRP4Q96LB8 373 aa9.79□□□□□ -0.84
NME3-211ENST00000568561 DPH3P1Q9H4G8 78 aa9.79□□□□□ -0.84
NME3-211ENST00000568561 NIT2Q9NQR4 276 aa9.79□□□□□ -0.84
NME3-211ENST00000568561 PLAC8Q9NZF1 115 aa9.79□□□□□ -0.84
NME3-211ENST00000568561 TRGC1P0CF51 173 aa9.78□□□□□ -0.84
NME3-211ENST00000568561 GNG4P50150 75 aa9.78□□□□□ -0.84
NME3-211ENST00000568561 COTL1Q14019 142 aa9.78□□□□□ -0.84
NME3-211ENST00000568561 PRSS3P2Q8NHM4 247 aa9.78□□□□□ -0.84
NME3-211ENST00000568561 SMDT1Q9H4I9 107 aa9.78□□□□□ -0.84
NME3-211ENST00000568561 TRBV20OR9-2A0A075B6H5 130 aa9.77□□□□□ -0.85
NME3-211ENST00000568561 TRAV26-2A0A0B4J265 109 aa9.77□□□□□ -0.85
NME3-211ENST00000568561 NTF3P20783 257 aa9.77□□□□□ -0.85
NME3-211ENST00000568561 MEF2BQ02080 365 aaPredicted RBP9.77□□□□□ -0.85
NME3-211ENST00000568561 MAJINQ3KP22 176 aa9.77□□□□□ -0.85
NME3-211ENST00000568561 COMMD7Q86VX2 200 aa9.77□□□□□ -0.85
NME3-211ENST00000568561 C7orf33Q8WU49 177 aa9.77□□□□□ -0.85
NME3-211ENST00000568561 GTSF1Q8WW33 167 aa9.77□□□□□ -0.85
NME3-211ENST00000568561 SRSF3P84103 164 aaKnown RBP9.76□□□□□ -0.85
NME3-211ENST00000568561 PEA15Q15121 130 aa9.76□□□□□ -0.85
NME3-211ENST00000568561 UQCC3Q6UW78 93 aa9.76□□□□□ -0.85
NME3-211ENST00000568561 EIF5A2Q9GZV4 153 aaKnown RBP9.76□□□□□ -0.85
NME3-211ENST00000568561 F2Z2F3 143 aa9.75□□□□□ -0.85
NME3-211ENST00000568561 RPS10P46783 165 aaKnown RBP9.75□□□□□ -0.85
NME3-211ENST00000568561 PRR3P79522 188 aaKnown RBP9.75□□□□□ -0.85
NME3-211ENST00000568561 CHCHD10Q8WYQ3 142 aaPredicted RBP9.75□□□□□ -0.85
NME3-211ENST00000568561 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.74□□□□□ -0.85
NME3-211ENST00000568561 IGKV2-29A2NJV5 120 aaPredicted RBP9.74□□□□□ -0.85
NME3-211ENST00000568561 XKRY2A2RUG3 117 aa9.74□□□□□ -0.85
NME3-211ENST00000568561 C9JQL5 133 aa9.74□□□□□ -0.85
NME3-211ENST00000568561 TMEM250H0YL14 139 aa9.74□□□□□ -0.85
NME3-211ENST00000568561 PDE6DO43924 150 aa9.74□□□□□ -0.85
NME3-211ENST00000568561 SRP19P09132 144 aaKnown RBP9.74□□□□□ -0.85
NME3-211ENST00000568561 CTRLP40313 264 aa9.74□□□□□ -0.85
NME3-211ENST00000568561 CFAP161Q6P656 301 aa9.74□□□□□ -0.85
NME3-211ENST00000568561 STPG4Q8N801 248 aa9.74□□□□□ -0.85
NME3-211ENST00000568561 GATD1Q8NB37 220 aa9.74□□□□□ -0.85
NME3-211ENST00000568561 RPL39LQ96EH5 51 aaKnown RBP9.74□□□□□ -0.85
NME3-211ENST00000568561 A0A096LNI7 61 aa9.73□□□□□ -0.85
NME3-211ENST00000568561 TWIST1Q15672 202 aa9.73□□□□□ -0.85
NME3-211ENST00000568561 AMMECR1LQ6DCA0 310 aa9.73□□□□□ -0.85
NME3-211ENST00000568561 RNASEKQ6P5S7 137 aaKnown RBP9.73□□□□□ -0.85
NME3-211ENST00000568561 SLC7A5P1Q8MH63 180 aa9.72□□□□□ -0.85
NME3-211ENST00000568561 NUDT10Q8NFP7 164 aa9.72□□□□□ -0.85
NME3-211ENST00000568561 LINC00526Q96FQ7 95 aa9.72□□□□□ -0.85
NME3-211ENST00000568561 NUDT11Q96G61 164 aa9.72□□□□□ -0.85
NME3-211ENST00000568561 GVQW2A0A096LPI5 108 aaPredicted RBP9.71□□□□□ -0.86
NME3-211ENST00000568561 FOXA3P55318 350 aaPredicted RBP9.71□□□□□ -0.86
NME3-211ENST00000568561 SMIM12Q96EX1 92 aa9.71□□□□□ -0.86
NME3-211ENST00000568561 LINC01600Q96MT4 127 aa9.71□□□□□ -0.86
NME3-211ENST00000568561 APCSP02743 223 aa9.7□□□□□ -0.86
NME3-211ENST00000568561 FGF6P10767 208 aa9.7□□□□□ -0.86
NME3-211ENST00000568561 FOXI1Q12951 378 aa9.7□□□□□ -0.86
NME3-211ENST00000568561 RNASE7Q9H1E1 156 aaKnown RBP9.7□□□□□ -0.86
NME3-211ENST00000568561 TMEM218A2RU14 115 aa9.69□□□□□ -0.86
NME3-211ENST00000568561 ATP6V1G1O75348 118 aa9.69□□□□□ -0.86
NME3-211ENST00000568561 S100A1P23297 94 aa9.69□□□□□ -0.86
NME3-211ENST00000568561 XCL1P47992 114 aa9.69□□□□□ -0.86
NME3-211ENST00000568561 CNFNQ9BYD5 112 aa9.69□□□□□ -0.86
NME3-211ENST00000568561 RPP21Q9H633 154 aaKnown RBP9.69□□□□□ -0.86
NME3-211ENST00000568561 K7EN84 100 aa9.68□□□□□ -0.86
NME3-211ENST00000568561 BIN3Q9NQY0 253 aa9.68□□□□□ -0.86
NME3-211ENST00000568561 SDHAF1A6NFY7 115 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms