RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 DNAJC30Q96LL9 226 aa8.66□□□□□ -1.02
TSC2-220ENST00000568238 TMEM242Q9NWH2 141 aa8.66□□□□□ -1.02
TSC2-220ENST00000568238 PSCAO43653 123 aa8.65□□□□□ -1.02
TSC2-220ENST00000568238 MRPL51Q4U2R6 128 aaKnown RBP8.65□□□□□ -1.02
TSC2-220ENST00000568238 ATRAIDQ6UW56 229 aa8.65□□□□□ -1.02
TSC2-220ENST00000568238 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.65□□□□□ -1.02
TSC2-220ENST00000568238 DEFB104AQ8WTQ1 72 aa8.65□□□□□ -1.02
TSC2-220ENST00000568238 TRAV9-1A0A075B6T8 112 aa8.64□□□□□ -1.03
TSC2-220ENST00000568238 IBA57-AS1B1ANH7 110 aa8.64□□□□□ -1.03
TSC2-220ENST00000568238 RPS10P46783 165 aaKnown RBP8.64□□□□□ -1.03
TSC2-220ENST00000568238 DAZ4Q86SG3 579 aaKnown RBP8.64□□□□□ -1.03
TSC2-220ENST00000568238 FRZBQ92765 325 aa8.64□□□□□ -1.03
TSC2-220ENST00000568238 Q9HAA7 133 aa8.64□□□□□ -1.03
TSC2-220ENST00000568238 DAZ3Q9NR90 486 aaKnown RBP8.64□□□□□ -1.03
TSC2-220ENST00000568238 D6R8Y8 96 aa8.63□□□□□ -1.03
TSC2-220ENST00000568238 IGHV3-30P01768 117 aa8.63□□□□□ -1.03
TSC2-220ENST00000568238 IGHV3-33P01772 117 aa8.63□□□□□ -1.03
TSC2-220ENST00000568238 IGHV3-30-3P0DP02 117 aa8.63□□□□□ -1.03
TSC2-220ENST00000568238 IGHV3-30-5P0DP03 117 aa8.63□□□□□ -1.03
TSC2-220ENST00000568238 CKS2P33552 79 aa8.63□□□□□ -1.03
TSC2-220ENST00000568238 SDHAF1A6NFY7 115 aa8.62□□□□□ -1.03
TSC2-220ENST00000568238 KRTAP10-1P60331 282 aa8.62□□□□□ -1.03
TSC2-220ENST00000568238 LAGE3Q14657 143 aa8.62□□□□□ -1.03
TSC2-220ENST00000568238 TMEM136Q6ZRR5 245 aa8.62□□□□□ -1.03
TSC2-220ENST00000568238 NRACQ8N912 160 aa8.62□□□□□ -1.03
TSC2-220ENST00000568238 ST20Q9HBF5 79 aa8.62□□□□□ -1.03
TSC2-220ENST00000568238 SRRM2Q9UQ35 2752 aaKnown RBP8.61□□□□□ -1.03
TSC2-220ENST00000568238 TRBV6-8A0A0A6YYG3 113 aa8.61□□□□□ -1.03
TSC2-220ENST00000568238 TGIF2-C20orf24A0A0A6YYL0 155 aa8.61□□□□□ -1.03
TSC2-220ENST00000568238 TRBV6-5A0A0K0K1A5 114 aa8.61□□□□□ -1.03
TSC2-220ENST00000568238 LRCOL1A6NCL2 159 aa8.61□□□□□ -1.03
TSC2-220ENST00000568238 EPM2AB3EWF7 344 aa8.61□□□□□ -1.03
TSC2-220ENST00000568238 GCSHP23434 173 aa8.61□□□□□ -1.03
TSC2-220ENST00000568238 NTM-AS1Q6ZSK4 140 aa8.61□□□□□ -1.03
TSC2-220ENST00000568238 IGLV5-52A0A0A0MRZ9 124 aa8.6□□□□□ -1.03
TSC2-220ENST00000568238 XGP55808 180 aa8.6□□□□□ -1.03
TSC2-220ENST00000568238 COTL1Q14019 142 aa8.6□□□□□ -1.03
TSC2-220ENST00000568238 TMEM97Q5BJF2 176 aa8.6□□□□□ -1.03
TSC2-220ENST00000568238 CBLN2Q8IUK8 224 aa8.6□□□□□ -1.03
TSC2-220ENST00000568238 Q8N3U1 123 aa8.6□□□□□ -1.03
TSC2-220ENST00000568238 NTN5Q8WTR8 489 aaPredicted RBP8.6□□□□□ -1.03
TSC2-220ENST00000568238 CHCHD5Q9BSY4 110 aa8.6□□□□□ -1.03
TSC2-220ENST00000568238 TMEM70Q9BUB7 260 aa8.6□□□□□ -1.03
TSC2-220ENST00000568238 MYCBP2O75592 4640 aa8.59□□□□□ -1.03
TSC2-220ENST00000568238 TRBV25-1A0A075B6N4 114 aa8.59□□□□□ -1.03
TSC2-220ENST00000568238 IGHV1-24A0A0C4DH33 117 aa8.59□□□□□ -1.03
TSC2-220ENST00000568238 TNFRSF6BO95407 300 aa8.59□□□□□ -1.03
TSC2-220ENST00000568238 PPP1R17O96001 155 aa8.59□□□□□ -1.03
TSC2-220ENST00000568238 NPYP01303 97 aa8.59□□□□□ -1.03
TSC2-220ENST00000568238 PMCHP20382 165 aa8.59□□□□□ -1.03
TSC2-220ENST00000568238 ELOBQ15370 118 aa8.59□□□□□ -1.03
TSC2-220ENST00000568238 ORMDL3Q8N138 153 aa8.59□□□□□ -1.03
TSC2-220ENST00000568238 Q8N814 137 aa8.59□□□□□ -1.03
TSC2-220ENST00000568238 PRELID3AQ96N28 172 aa8.59□□□□□ -1.03
TSC2-220ENST00000568238 TM2D2Q9BX73 214 aa8.59□□□□□ -1.03
TSC2-220ENST00000568238 I3L3M4 83 aa8.58□□□□□ -1.04
TSC2-220ENST00000568238 APCSP02743 223 aa8.58□□□□□ -1.04
TSC2-220ENST00000568238 PPBPP02775 128 aa8.58□□□□□ -1.04
TSC2-220ENST00000568238 AMTP48728 403 aa8.58□□□□□ -1.04
TSC2-220ENST00000568238 SUMO2P61956 95 aaKnown RBP8.58□□□□□ -1.04
TSC2-220ENST00000568238 IQCJQ1A5X6 159 aa8.58□□□□□ -1.04
TSC2-220ENST00000568238 GNB1LQ9BYB4 327 aa8.58□□□□□ -1.04
TSC2-220ENST00000568238 HERC1Q15751 4861 aa8.58□□□□□ -1.04
TSC2-220ENST00000568238 TRAV8-3A0A0A6YYJ7 113 aa8.57□□□□□ -1.04
TSC2-220ENST00000568238 TMEM262E9PQX1 116 aa8.57□□□□□ -1.04
TSC2-220ENST00000568238 TSHBP01222 138 aa8.57□□□□□ -1.04
TSC2-220ENST00000568238 HLA-DQA1P01909 254 aa8.57□□□□□ -1.04
TSC2-220ENST00000568238 POLR2KP53803 58 aaKnown RBP8.57□□□□□ -1.04
TSC2-220ENST00000568238 GAGE6Q13070 117 aa8.57□□□□□ -1.04
TSC2-220ENST00000568238 KIAA1644Q3SXP7 199 aa8.57□□□□□ -1.04
TSC2-220ENST00000568238 NIT1Q86X76 327 aa8.57□□□□□ -1.04
TSC2-220ENST00000568238 TMEM243Q9BU79 118 aa8.57□□□□□ -1.04
TSC2-220ENST00000568238 SMCO4Q9NRQ5 59 aa8.57□□□□□ -1.04
TSC2-220ENST00000568238 DMBT1Q9UGM3 2413 aaPredicted RBP8.56□□□□□ -1.04
TSC2-220ENST00000568238 TRBV24-1A0A075B6N3 115 aa8.56□□□□□ -1.04
TSC2-220ENST00000568238 A0A087WX48 190 aa8.56□□□□□ -1.04
TSC2-220ENST00000568238 TRBV27A0A0K0K1C4 114 aa8.56□□□□□ -1.04
TSC2-220ENST00000568238 VCYO14598 125 aa8.56□□□□□ -1.04
TSC2-220ENST00000568238 COX19Q49B96 90 aa8.56□□□□□ -1.04
TSC2-220ENST00000568238 Q5VSD8 79 aa8.56□□□□□ -1.04
TSC2-220ENST00000568238 YPEL4Q96NS1 127 aa8.56□□□□□ -1.04
TSC2-220ENST00000568238 C20orf78Q9BR46 151 aa8.56□□□□□ -1.04
TSC2-220ENST00000568238 MRPL18Q9H0U6 180 aaKnown RBP8.56□□□□□ -1.04
TSC2-220ENST00000568238 PHOX2AO14813 284 aa8.55□□□□□ -1.04
TSC2-220ENST00000568238 MT-ND6P03923 174 aa8.55□□□□□ -1.04
TSC2-220ENST00000568238 FCER1GP30273 86 aa8.55□□□□□ -1.04
TSC2-220ENST00000568238 FABP9Q0Z7S8 132 aa8.55□□□□□ -1.04
TSC2-220ENST00000568238 MPV17L2Q567V2 206 aa8.55□□□□□ -1.04
TSC2-220ENST00000568238 SMIM2Q9BVW6 85 aa8.55□□□□□ -1.04
TSC2-220ENST00000568238 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.54□□□□□ -1.04
TSC2-220ENST00000568238 LOC389332A0A1B0GUA5 103 aa8.54□□□□□ -1.04
TSC2-220ENST00000568238 IGKV2-29A2NJV5 120 aaPredicted RBP8.54□□□□□ -1.04
TSC2-220ENST00000568238 UBE2L6O14933 153 aa8.54□□□□□ -1.04
TSC2-220ENST00000568238 PKIAP61925 76 aa8.54□□□□□ -1.04
TSC2-220ENST00000568238 HAMPP81172 84 aa8.54□□□□□ -1.04
TSC2-220ENST00000568238 WFDC2Q14508 124 aa8.54□□□□□ -1.04
TSC2-220ENST00000568238 Q8N976 141 aa8.54□□□□□ -1.04
TSC2-220ENST00000568238 KIR2DL4Q99706 377 aa8.54□□□□□ -1.04
TSC2-220ENST00000568238 MAP1LC3AQ9H492 121 aa8.54□□□□□ -1.04
TSC2-220ENST00000568238 LAMTOR2Q9Y2Q5 125 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms