RNA–Protein interactions for RNA: ENST00000567806.1

GTF3C1-207, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 4

Gene GTF3C1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-207ENST00000567806 LYZL1Q6UWQ5 148 aa12.37□□□□□ -0.43
GTF3C1-207ENST00000567806 UBE2WQ96B02 151 aa12.37□□□□□ -0.43
GTF3C1-207ENST00000567806 BTF3L4Q96K17 158 aa12.37□□□□□ -0.43
GTF3C1-207ENST00000567806 KRTAP29-1A8MX34 341 aaPredicted RBP12.36□□□□□ -0.43
GTF3C1-207ENST00000567806 APOC3P02656 99 aa12.36□□□□□ -0.43
GTF3C1-207ENST00000567806 GZMBP10144 247 aa12.36□□□□□ -0.43
GTF3C1-207ENST00000567806 RPL36AP83881 106 aaKnown RBP12.36□□□□□ -0.43
GTF3C1-207ENST00000567806 OR10AG1Q8NH19 301 aa12.36□□□□□ -0.43
GTF3C1-207ENST00000567806 RPL36ALQ969Q0 106 aaKnown RBP12.36□□□□□ -0.43
GTF3C1-207ENST00000567806 CHCHD7Q9BUK0 85 aa12.36□□□□□ -0.43
GTF3C1-207ENST00000567806 S100PP25815 95 aa12.35□□□□□ -0.43
GTF3C1-207ENST00000567806 CLRN3Q8NCR9 226 aa12.35□□□□□ -0.43
GTF3C1-207ENST00000567806 GTSF1Q8WW33 167 aa12.35□□□□□ -0.43
GTF3C1-207ENST00000567806 DNAJC30Q96LL9 226 aa12.35□□□□□ -0.43
GTF3C1-207ENST00000567806 TRAV9-1A0A075B6T8 112 aa12.34□□□□□ -0.43
GTF3C1-207ENST00000567806 TRBV10-1A0A0K0K1A3 114 aa12.34□□□□□ -0.43
GTF3C1-207ENST00000567806 TMEM262E9PQX1 116 aa12.34□□□□□ -0.43
GTF3C1-207ENST00000567806 NTF3P20783 257 aa12.34□□□□□ -0.43
GTF3C1-207ENST00000567806 TWIST1Q15672 202 aa12.34□□□□□ -0.43
GTF3C1-207ENST00000567806 SCXQ7RTU7 201 aa12.34□□□□□ -0.43
GTF3C1-207ENST00000567806 Q0VG73 95 aa12.33□□□□□ -0.44
GTF3C1-207ENST00000567806 ATP5L2Q7Z4Y8 100 aa12.33□□□□□ -0.44
GTF3C1-207ENST00000567806 PGLYRP4Q96LB8 373 aa12.33□□□□□ -0.44
GTF3C1-207ENST00000567806 CHAC1Q9BUX1 264 aa12.33□□□□□ -0.44
GTF3C1-207ENST00000567806 TRBV7-3A0A075B6L6 115 aa12.32□□□□□ -0.44
GTF3C1-207ENST00000567806 C7orf77A4D0Y5 90 aa12.32□□□□□ -0.44
GTF3C1-207ENST00000567806 UBE2D3P61077 147 aa12.32□□□□□ -0.44
GTF3C1-207ENST00000567806 UBE2D2P62837 147 aa12.32□□□□□ -0.44
GTF3C1-207ENST00000567806 SLC7A5P1Q8MH63 180 aa12.32□□□□□ -0.44
GTF3C1-207ENST00000567806 NUP35Q8NFH5 326 aa12.32□□□□□ -0.44
GTF3C1-207ENST00000567806 DPH3P1Q9H4G8 78 aa12.32□□□□□ -0.44
GTF3C1-207ENST00000567806 H7C1H1 209 aa12.31□□□□□ -0.44
GTF3C1-207ENST00000567806 C14orf177Q52M58 125 aa12.31□□□□□ -0.44
GTF3C1-207ENST00000567806 RPS10P5Q9NQ39 176 aa12.31□□□□□ -0.44
GTF3C1-207ENST00000567806 RAB4BP61018 213 aa12.3□□□□□ -0.44
GTF3C1-207ENST00000567806 RASL11AQ6T310 242 aa12.3□□□□□ -0.44
GTF3C1-207ENST00000567806 ATRAIDQ6UW56 229 aa12.3□□□□□ -0.44
GTF3C1-207ENST00000567806 C1orf43Q9BWL3 253 aa12.3□□□□□ -0.44
GTF3C1-207ENST00000567806 COX19Q49B96 90 aa12.29□□□□□ -0.44
GTF3C1-207ENST00000567806 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.29□□□□□ -0.44
GTF3C1-207ENST00000567806 TRBV6-8A0A0A6YYG3 113 aa12.28□□□□□ -0.44
GTF3C1-207ENST00000567806 CRPP02741 224 aa12.28□□□□□ -0.44
GTF3C1-207ENST00000567806 HBBP68871 147 aa12.28□□□□□ -0.44
GTF3C1-207ENST00000567806 CIRBP-AS1Q8TBR5 109 aa12.28□□□□□ -0.44
GTF3C1-207ENST00000567806 TMEM191AQ9H0A3 160 aa12.28□□□□□ -0.44
GTF3C1-207ENST00000567806 F5H697 171 aa12.27□□□□□ -0.45
GTF3C1-207ENST00000567806 SSTP61278 116 aa12.27□□□□□ -0.45
GTF3C1-207ENST00000567806 ZNF56Q15929 161 aa12.27□□□□□ -0.45
GTF3C1-207ENST00000567806 MUC21A0A0G2JKD1 596 aa12.26□□□□□ -0.45
GTF3C1-207ENST00000567806 MUC21A0A140T8X8 626 aa12.26□□□□□ -0.45
GTF3C1-207ENST00000567806 PPP1R17O96001 155 aa12.26□□□□□ -0.45
GTF3C1-207ENST00000567806 ENHOQ6UWT2 76 aa12.26□□□□□ -0.45
GTF3C1-207ENST00000567806 ANGP03950 147 aaKnown RBP12.25□□□□□ -0.45
GTF3C1-207ENST00000567806 PKIAP61925 76 aa12.25□□□□□ -0.45
GTF3C1-207ENST00000567806 NEXN-AS1Q8NBZ9 246 aa12.25□□□□□ -0.45
GTF3C1-207ENST00000567806 CHCHD5Q9BSY4 110 aa12.25□□□□□ -0.45
GTF3C1-207ENST00000567806 SERTAD4-AS1Q5TG53 156 aa12.24□□□□□ -0.45
GTF3C1-207ENST00000567806 KIF25-AS1Q9Y6Z4 181 aa12.24□□□□□ -0.45
GTF3C1-207ENST00000567806 OXTP01178 125 aa12.23□□□□□ -0.45
GTF3C1-207ENST00000567806 MGPP08493 103 aa12.23□□□□□ -0.45
GTF3C1-207ENST00000567806 S100A1P23297 94 aa12.23□□□□□ -0.45
GTF3C1-207ENST00000567806 MPV17L2Q567V2 206 aa12.23□□□□□ -0.45
GTF3C1-207ENST00000567806 CAMPP49913 170 aa12.22□□□□□ -0.45
GTF3C1-207ENST00000567806 KRTAP10-4P60372 401 aaPredicted RBP12.22□□□□□ -0.45
GTF3C1-207ENST00000567806 TMEM97Q5BJF2 176 aa12.22□□□□□ -0.45
GTF3C1-207ENST00000567806 GATD1Q8NB37 220 aa12.22□□□□□ -0.45
GTF3C1-207ENST00000567806 MRAP2Q96G30 205 aa12.22□□□□□ -0.45
GTF3C1-207ENST00000567806 SMCO4Q9NRQ5 59 aa12.22□□□□□ -0.45
GTF3C1-207ENST00000567806 A0A1B0GXF2 115 aa12.21□□□□□ -0.45
GTF3C1-207ENST00000567806 USP17L23D6RBM5 183 aa12.21□□□□□ -0.45
GTF3C1-207ENST00000567806 HLA-DQA1P01909 254 aa12.21□□□□□ -0.45
GTF3C1-207ENST00000567806 PPBPP02775 128 aa12.21□□□□□ -0.45
GTF3C1-207ENST00000567806 MIAQ16674 131 aa12.21□□□□□ -0.45
GTF3C1-207ENST00000567806 MRPL54Q6P161 138 aaKnown RBP12.21□□□□□ -0.45
GTF3C1-207ENST00000567806 MT-ND6P03923 174 aa12.19□□□□□ -0.46
GTF3C1-207ENST00000567806 FAM104BQ5XKR9 115 aa12.19□□□□□ -0.46
GTF3C1-207ENST00000567806 DGAT2L7PQ6IED9 249 aa12.19□□□□□ -0.46
GTF3C1-207ENST00000567806 RPL37AP61513 92 aaKnown RBP12.18□□□□□ -0.46
GTF3C1-207ENST00000567806 NIT2Q9NQR4 276 aa12.18□□□□□ -0.46
GTF3C1-207ENST00000567806 LRP1Q07954 4544 aaKnown RBP12.18□□□□□ -0.46
GTF3C1-207ENST00000567806 TRBV24-1A0A075B6N3 115 aa12.17□□□□□ -0.46
GTF3C1-207ENST00000567806 M0QY20 66 aa12.17□□□□□ -0.46
GTF3C1-207ENST00000567806 PRSS1P07477 247 aa12.17□□□□□ -0.46
GTF3C1-207ENST00000567806 RAB4AP20338 218 aa12.17□□□□□ -0.46
GTF3C1-207ENST00000567806 GAGE6Q13070 117 aa12.17□□□□□ -0.46
GTF3C1-207ENST00000567806 SUMO4Q6EEV6 95 aa12.17□□□□□ -0.46
GTF3C1-207ENST00000567806 NTM-AS1Q6ZSK4 140 aa12.17□□□□□ -0.46
GTF3C1-207ENST00000567806 GNB1LQ9BYB4 327 aa12.17□□□□□ -0.46
GTF3C1-207ENST00000567806 TRBV25-1A0A075B6N4 114 aa12.16□□□□□ -0.46
GTF3C1-207ENST00000567806 RBX1P62877 108 aa12.16□□□□□ -0.46
GTF3C1-207ENST00000567806 LINC00269Q8N2A0 174 aa12.16□□□□□ -0.46
GTF3C1-207ENST00000567806 LAMTOR2Q9Y2Q5 125 aa12.16□□□□□ -0.46
GTF3C1-207ENST00000567806 PHOX2AO14813 284 aa12.15□□□□□ -0.46
GTF3C1-207ENST00000567806 CLPSL2Q6UWE3 100 aa12.15□□□□□ -0.46
GTF3C1-207ENST00000567806 AMN1Q8IY45 258 aa12.15□□□□□ -0.46
GTF3C1-207ENST00000567806 C9orf163Q8N9P6 203 aa12.15□□□□□ -0.46
GTF3C1-207ENST00000567806 PRR34Q9NV39 138 aa12.15□□□□□ -0.46
GTF3C1-207ENST00000567806 CKS2P33552 79 aa12.14□□□□□ -0.47
GTF3C1-207ENST00000567806 IGHV1-24A0A0C4DH33 117 aa12.13□□□□□ -0.47
GTF3C1-207ENST00000567806 TCAPO15273 167 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms