RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 KRTAP29-1A8MX34 341 aaPredicted RBP3.78□□□□□ -1.8
CAPN3-214ENST00000565274 M0R3E3 92 aa3.78□□□□□ -1.8
CAPN3-214ENST00000565274 ATOX1O00244 68 aa3.78□□□□□ -1.8
CAPN3-214ENST00000565274 IL4P05112 153 aa3.78□□□□□ -1.8
CAPN3-214ENST00000565274 RBMY1DP0C7P1 496 aaKnown RBP3.78□□□□□ -1.8
CAPN3-214ENST00000565274 RBMY1A1P0DJD3 496 aaKnown RBP3.78□□□□□ -1.8
CAPN3-214ENST00000565274 LGALS3P17931 250 aaKnown RBP3.78□□□□□ -1.8
CAPN3-214ENST00000565274 CRIP2P52943 208 aaPredicted RBP3.78□□□□□ -1.8
CAPN3-214ENST00000565274 MP68P56378 58 aa3.78□□□□□ -1.8
CAPN3-214ENST00000565274 SS18Q15532 418 aa3.78□□□□□ -1.8
CAPN3-214ENST00000565274 Q8N8P6 123 aa3.78□□□□□ -1.8
CAPN3-214ENST00000565274 SMAD5-AS1Q9Y6J3 95 aa3.78□□□□□ -1.8
CAPN3-214ENST00000565274 ABCA1O95477 2261 aa3.78□□□□□ -1.8
CAPN3-214ENST00000565274 ANKHD1Q8IWZ3 2542 aaKnown RBP3.78□□□□□ -1.8
CAPN3-214ENST00000565274 FRYQ5TBA9 3013 aa3.77□□□□□ -1.81
CAPN3-214ENST00000565274 ANKRD11Q6UB99 2663 aaPredicted RBP3.77□□□□□ -1.81
CAPN3-214ENST00000565274 IGKV2-40A0A087WW87 121 aaPredicted RBP3.77□□□□□ -1.81
CAPN3-214ENST00000565274 IGHV7-81A0A0B4J1V7 117 aa3.77□□□□□ -1.81
CAPN3-214ENST00000565274 TRAV2A0A0B4J234 112 aa3.77□□□□□ -1.81
CAPN3-214ENST00000565274 TMEM256-PLSCR3K7ERE1 68 aa3.77□□□□□ -1.81
CAPN3-214ENST00000565274 UBE2L6O14933 153 aa3.77□□□□□ -1.81
CAPN3-214ENST00000565274 IGKV2D-40P01614 121 aaPredicted RBP3.77□□□□□ -1.81
CAPN3-214ENST00000565274 APELAP0DMC3 54 aa3.77□□□□□ -1.81
CAPN3-214ENST00000565274 COX7A1P24310 79 aa3.77□□□□□ -1.81
CAPN3-214ENST00000565274 PLNP26678 52 aa3.77□□□□□ -1.81
CAPN3-214ENST00000565274 FXYD7P58549 80 aa3.77□□□□□ -1.81
CAPN3-214ENST00000565274 VMO1Q7Z5L0 202 aa3.77□□□□□ -1.81
CAPN3-214ENST00000565274 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.77□□□□□ -1.81
CAPN3-214ENST00000565274 Q8N9W7 124 aa3.77□□□□□ -1.81
CAPN3-214ENST00000565274 TOMM6Q96B49 74 aa3.77□□□□□ -1.81
CAPN3-214ENST00000565274 SLC50A1Q9BRV3 221 aa3.77□□□□□ -1.81
CAPN3-214ENST00000565274 MOB4Q9Y3A3 225 aa3.77□□□□□ -1.81
CAPN3-214ENST00000565274 LENEPQ9Y5L5 61 aa3.77□□□□□ -1.81
CAPN3-214ENST00000565274 ACACAQ13085 2346 aa3.77□□□□□ -1.81
CAPN3-214ENST00000565274 FREM2Q5SZK8 3169 aa3.77□□□□□ -1.81
CAPN3-214ENST00000565274 DCHS1Q96JQ0 3298 aa3.76□□□□□ -1.81
CAPN3-214ENST00000565274 PLXNB1O43157 2135 aa3.76□□□□□ -1.81
CAPN3-214ENST00000565274 APC2O95996 2303 aa3.76□□□□□ -1.81
CAPN3-214ENST00000565274 PIEZO1Q92508 2521 aa3.76□□□□□ -1.81
CAPN3-214ENST00000565274 PKDREJQ9NTG1 2253 aa3.76□□□□□ -1.81
CAPN3-214ENST00000565274 TRGV11A0A075B6L2 103 aa3.76□□□□□ -1.81
CAPN3-214ENST00000565274 TRAV12-1A0A0B4J245 112 aa3.76□□□□□ -1.81
CAPN3-214ENST00000565274 LYNX1G3V0Z9 82 aa3.76□□□□□ -1.81
CAPN3-214ENST00000565274 TRBV12-3P01733 135 aa3.76□□□□□ -1.81
CAPN3-214ENST00000565274 PRSS1P07477 247 aa3.76□□□□□ -1.81
CAPN3-214ENST00000565274 LYNX1P0DP58 116 aa3.76□□□□□ -1.81
CAPN3-214ENST00000565274 SLC25A16P16260 332 aa3.76□□□□□ -1.81
CAPN3-214ENST00000565274 EFNA4P52798 201 aa3.76□□□□□ -1.81
CAPN3-214ENST00000565274 KRTAP10-9P60411 292 aa3.76□□□□□ -1.81
CAPN3-214ENST00000565274 LMO4P61968 165 aa3.76□□□□□ -1.81
CAPN3-214ENST00000565274 NDPQ00604 133 aa3.76□□□□□ -1.81
CAPN3-214ENST00000565274 C9orf47Q6ZRZ4 202 aa3.76□□□□□ -1.81
CAPN3-214ENST00000565274 LINC01560Q8TB33 94 aa3.76□□□□□ -1.81
CAPN3-214ENST00000565274 TIMM17AQ99595 171 aa3.76□□□□□ -1.81
CAPN3-214ENST00000565274 TTTY13Q9BZ97 58 aa3.76□□□□□ -1.81
CAPN3-214ENST00000565274 MRPL35Q9NZE8 188 aaKnown RBP3.76□□□□□ -1.81
CAPN3-214ENST00000565274 DSPP15924 2871 aaKnown RBP3.76□□□□□ -1.81
CAPN3-214ENST00000565274 ZGRF1Q86YA3 2104 aa3.76□□□□□ -1.81
CAPN3-214ENST00000565274 TLN1Q9Y490 2541 aaKnown RBP3.75□□□□□ -1.81
CAPN3-214ENST00000565274 TRBV7-1A0A0A6YYK4 115 aa3.75□□□□□ -1.81
CAPN3-214ENST00000565274 CLPSL1A2RUU4 121 aa3.75□□□□□ -1.81
CAPN3-214ENST00000565274 F8VRH5 84 aa3.75□□□□□ -1.81
CAPN3-214ENST00000565274 K7EMI3 77 aa3.75□□□□□ -1.81
CAPN3-214ENST00000565274 COX7A2LO14548 114 aa3.75□□□□□ -1.81
CAPN3-214ENST00000565274 SEC61BP60468 96 aaKnown RBP3.75□□□□□ -1.81
CAPN3-214ENST00000565274 CEMP1Q6PRD7 247 aaPredicted RBP3.75□□□□□ -1.81
CAPN3-214ENST00000565274 NRACQ8N912 160 aa3.75□□□□□ -1.81
CAPN3-214ENST00000565274 Q8TAT8 98 aa3.75□□□□□ -1.81
CAPN3-214ENST00000565274 ZNF580Q9UK33 172 aa3.75□□□□□ -1.81
CAPN3-214ENST00000565274 NBEAQ8NFP9 2946 aa3.75□□□□□ -1.81
CAPN3-214ENST00000565274 SPTBN2O15020 2390 aa3.75□□□□□ -1.81
CAPN3-214ENST00000565274 CELSR3Q9NYQ7 3312 aa3.74□□□□□ -1.81
CAPN3-214ENST00000565274 TRAV40A0A0B4J280 105 aa3.74□□□□□ -1.81
CAPN3-214ENST00000565274 IGHV7-4-1A0A0J9YVY3 117 aa3.74□□□□□ -1.81
CAPN3-214ENST00000565274 MYMXA0A1B0GTQ4 84 aa3.74□□□□□ -1.81
CAPN3-214ENST00000565274 H3BUA1 57 aa3.74□□□□□ -1.81
CAPN3-214ENST00000565274 GAS8-AS1O95177 125 aa3.74□□□□□ -1.81
CAPN3-214ENST00000565274 C6orf99Q4VX62 202 aa3.74□□□□□ -1.81
CAPN3-214ENST00000565274 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.74□□□□□ -1.81
CAPN3-214ENST00000565274 NOTCH2NLQ7Z3S9 236 aa3.74□□□□□ -1.81
CAPN3-214ENST00000565274 C5orf38Q86SI9 138 aa3.74□□□□□ -1.81
CAPN3-214ENST00000565274 DYNAPQ8N1N2 210 aa3.74□□□□□ -1.81
CAPN3-214ENST00000565274 SERP2Q8N6R1 65 aa3.74□□□□□ -1.81
CAPN3-214ENST00000565274 LINC00476Q8WZB0 136 aa3.74□□□□□ -1.81
CAPN3-214ENST00000565274 PCNX1Q96RV3 2341 aa3.74□□□□□ -1.81
CAPN3-214ENST00000565274 HIST1H4GQ99525 98 aa3.74□□□□□ -1.81
CAPN3-214ENST00000565274 SMIM2Q9BVW6 85 aa3.74□□□□□ -1.81
CAPN3-214ENST00000565274 MSRB1Q9NZV6 116 aa3.74□□□□□ -1.81
CAPN3-214ENST00000565274 ASPMQ8IZT6 3477 aa3.74□□□□□ -1.81
CAPN3-214ENST00000565274 PTPRQQ9UMZ3 2332 aa3.73□□□□□ -1.81
CAPN3-214ENST00000565274 IGKV3D-20A0A0C4DH25 116 aa3.73□□□□□ -1.81
CAPN3-214ENST00000565274 A0A0J9YXV3 536 aa3.73□□□□□ -1.81
CAPN3-214ENST00000565274 LINC01549A6NIU2 74 aa3.73□□□□□ -1.81
CAPN3-214ENST00000565274 FAM223BA6NKX1 122 aa3.73□□□□□ -1.81
CAPN3-214ENST00000565274 PSPHP1O15172 72 aa3.73□□□□□ -1.81
CAPN3-214ENST00000565274 TIMM17BO60830 172 aa3.73□□□□□ -1.81
CAPN3-214ENST00000565274 TRGV3P03979 118 aa3.73□□□□□ -1.81
CAPN3-214ENST00000565274 PRB4P10163 310 aaPredicted RBP3.73□□□□□ -1.81
CAPN3-214ENST00000565274 PSMB2P49721 201 aa3.73□□□□□ -1.81
CAPN3-214ENST00000565274 UBE2D1P51668 147 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms