RNA–Protein interactions for RNA: ENST00000564757.5

SCAPER-213, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 5

Gene SCAPER, Length 626 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-213ENST00000564757 MRPL54Q6P161 138 aaKnown RBP0.55□□□□□ -2.32
SCAPER-213ENST00000564757 SPAG11AQ6PDA7 123 aa0.55□□□□□ -2.32
SCAPER-213ENST00000564757 C8orf59Q8N0T1 100 aaPredicted RBP0.55□□□□□ -2.32
SCAPER-213ENST00000564757 PI4KAP42356 2102 aa0.55□□□□□ -2.32
SCAPER-213ENST00000564757 SIPA1L3O60292 1781 aaPredicted RBP0.55□□□□□ -2.32
SCAPER-213ENST00000564757 PPIP5K1Q6PFW1 1433 aa0.55□□□□□ -2.32
SCAPER-213ENST00000564757 DOCK2Q92608 1830 aa0.54□□□□□ -2.32
SCAPER-213ENST00000564757 UNC13BO14795 1591 aa0.54□□□□□ -2.32
SCAPER-213ENST00000564757 F8P00451 2351 aa0.54□□□□□ -2.32
SCAPER-213ENST00000564757 IGF2RP11717 2491 aa0.54□□□□□ -2.32
SCAPER-213ENST00000564757 DLEU1O43261 78 aa0.54□□□□□ -2.32
SCAPER-213ENST00000564757 SCN3BQ9NY72 215 aa0.54□□□□□ -2.32
SCAPER-213ENST00000564757 MUC2Q02817 5179 aa0.54□□□□□ -2.32
SCAPER-213ENST00000564757 CHD9Q3L8U1 2897 aa0.54□□□□□ -2.32
SCAPER-213ENST00000564757 GOLGA3Q08378 1498 aa0.54□□□□□ -2.32
SCAPER-213ENST00000564757 MAST4O15021 2626 aa0.53□□□□□ -2.32
SCAPER-213ENST00000564757 IFT172Q9UG01 1749 aa0.53□□□□□ -2.32
SCAPER-213ENST00000564757 PTPRZ1P23471 2315 aaPredicted RBP0.53□□□□□ -2.32
SCAPER-213ENST00000564757 PATJQ8NI35 1801 aa0.53□□□□□ -2.32
SCAPER-213ENST00000564757 SPAARA0A1B0GVQ0 90 aa0.53□□□□□ -2.32
SCAPER-213ENST00000564757 PIN1P1O15428 100 aa0.53□□□□□ -2.32
SCAPER-213ENST00000564757 CCL18P55774 89 aa0.53□□□□□ -2.32
SCAPER-213ENST00000564757 TPPP2P59282 170 aa0.53□□□□□ -2.32
SCAPER-213ENST00000564757 C9orf153Q5TBE3 101 aa0.53□□□□□ -2.32
SCAPER-213ENST00000564757 FAM213BQ8TBF2 198 aa0.53□□□□□ -2.32
SCAPER-213ENST00000564757 SMIM4Q8WVI0 70 aa0.53□□□□□ -2.32
SCAPER-213ENST00000564757 V9GYH0 126 aa0.53□□□□□ -2.32
SCAPER-213ENST00000564757 MUC5BQ9HC84 5762 aaPredicted RBP0.53□□□□□ -2.33
SCAPER-213ENST00000564757 DOCK1Q14185 1865 aa0.52□□□□□ -2.33
SCAPER-213ENST00000564757 M0R135 149 aa0.52□□□□□ -2.33
SCAPER-213ENST00000564757 Q5VV11 94 aa0.52□□□□□ -2.33
SCAPER-213ENST00000564757 SSBP3-AS1Q7Z2R9 100 aa0.52□□□□□ -2.33
SCAPER-213ENST00000564757 LENEPQ9Y5L5 61 aa0.52□□□□□ -2.33
SCAPER-213ENST00000564757 ZMYM4Q5VZL5 1548 aa0.52□□□□□ -2.33
SCAPER-213ENST00000564757 KIAA1109Q2LD37 5005 aa0.51□□□□□ -2.33
SCAPER-213ENST00000564757 ZNF815PA8K554 130 aa0.51□□□□□ -2.33
SCAPER-213ENST00000564757 F6UZH7 168 aa0.51□□□□□ -2.33
SCAPER-213ENST00000564757 KRTAP2-3P0C7H8 128 aa0.51□□□□□ -2.33
SCAPER-213ENST00000564757 MRC1P22897 1456 aa0.51□□□□□ -2.33
SCAPER-213ENST00000564757 S100A1P23297 94 aa0.51□□□□□ -2.33
SCAPER-213ENST00000564757 CPSF1Q10570 1443 aaKnown RBP0.51□□□□□ -2.33
SCAPER-213ENST00000564757 PRDM2Q13029 1718 aa0.51□□□□□ -2.33
SCAPER-213ENST00000564757 MYOZ3Q8TDC0 251 aa0.51□□□□□ -2.33
SCAPER-213ENST00000564757 SPANXDQ9BXN6 97 aa0.51□□□□□ -2.33
SCAPER-213ENST00000564757 KRTAP2-4Q9BYR9 128 aa0.51□□□□□ -2.33
SCAPER-213ENST00000564757 KRTAP2-1Q9BYU5 128 aa0.51□□□□□ -2.33
SCAPER-213ENST00000564757 CYP4F30PQ9H0H9 118 aa0.51□□□□□ -2.33
SCAPER-213ENST00000564757 GNG8Q9UK08 70 aa0.51□□□□□ -2.33
SCAPER-213ENST00000564757 NALCNQ8IZF0 1738 aa0.5□□□□□ -2.33
SCAPER-213ENST00000564757 PXDNQ92626 1479 aa0.5□□□□□ -2.33
SCAPER-213ENST00000564757 G3V318 75 aa0.5□□□□□ -2.33
SCAPER-213ENST00000564757 SSSCA1O60232 199 aa0.5□□□□□ -2.33
SCAPER-213ENST00000564757 KRTAP21-1Q3LI58 79 aa0.5□□□□□ -2.33
SCAPER-213ENST00000564757 C5orf38Q86SI9 138 aa0.5□□□□□ -2.33
SCAPER-213ENST00000564757 SVBPQ8N300 66 aa0.5□□□□□ -2.33
SCAPER-213ENST00000564757 TSLPQ969D9 159 aa0.5□□□□□ -2.33
SCAPER-213ENST00000564757 CELSR2Q9HCU4 2923 aa0.5□□□□□ -2.33
SCAPER-213ENST00000564757 ZNF609O15014 1411 aa0.49□□□□□ -2.33
SCAPER-213ENST00000564757 SMG6Q86US8 1419 aaKnown RBP0.49□□□□□ -2.33
SCAPER-213ENST00000564757 FAM24AA6NFZ4 105 aa0.49□□□□□ -2.33
SCAPER-213ENST00000564757 OOSP1A8MZH6 123 aa0.49□□□□□ -2.33
SCAPER-213ENST00000564757 SPINK1P00995 79 aa0.49□□□□□ -2.33
SCAPER-213ENST00000564757 S100A3P33764 101 aa0.49□□□□□ -2.33
SCAPER-213ENST00000564757 HAMPP81172 84 aa0.49□□□□□ -2.33
SCAPER-213ENST00000564757 MRPS10P82664 201 aaKnown RBP0.49□□□□□ -2.33
SCAPER-213ENST00000564757 TMEM203Q969S6 136 aa0.49□□□□□ -2.33
SCAPER-213ENST00000564757 MGST2Q99735 147 aa0.49□□□□□ -2.33
SCAPER-213ENST00000564757 DYNLRB1Q9NP97 96 aa0.49□□□□□ -2.33
SCAPER-213ENST00000564757 MACF1Q9UPN3 7388 aaKnown RBP0.49□□□□□ -2.33
SCAPER-213ENST00000564757 ZNF292O60281 2723 aa0.49□□□□□ -2.33
SCAPER-213ENST00000564757 A2ML1A8K2U0 1454 aa0.48□□□□□ -2.33
SCAPER-213ENST00000564757 TRBV7-3A0A075B6L6 115 aa0.48□□□□□ -2.33
SCAPER-213ENST00000564757 A0A0D9SFI3 127 aa0.48□□□□□ -2.33
SCAPER-213ENST00000564757 TNFP01375 233 aa0.48□□□□□ -2.33
SCAPER-213ENST00000564757 GNG4P50150 75 aa0.48□□□□□ -2.33
SCAPER-213ENST00000564757 PPP3R1P63098 170 aa0.48□□□□□ -2.33
SCAPER-213ENST00000564757 TMEM170BQ5T4T1 132 aa0.48□□□□□ -2.33
SCAPER-213ENST00000564757 COMMD6Q7Z4G1 85 aa0.48□□□□□ -2.33
SCAPER-213ENST00000564757 F8VRH5 84 aa0.47□□□□□ -2.33
SCAPER-213ENST00000564757 APOC3P02656 99 aa0.47□□□□□ -2.33
SCAPER-213ENST00000564757 SPINK8P0C7L1 97 aa0.47□□□□□ -2.33
SCAPER-213ENST00000564757 COX17Q14061 63 aa0.47□□□□□ -2.33
SCAPER-213ENST00000564757 Q5BKY6 102 aa0.47□□□□□ -2.33
SCAPER-213ENST00000564757 C2orf88Q9BSF0 95 aa0.47□□□□□ -2.33
SCAPER-213ENST00000564757 EIF4G3O43432 1585 aaKnown RBP0.47□□□□□ -2.33
SCAPER-213ENST00000564757 BCL9LQ86UU0 1499 aa0.47□□□□□ -2.33
SCAPER-213ENST00000564757 OTOGQ6ZRI0 2925 aa0.47□□□□□ -2.33
SCAPER-213ENST00000564757 AHCTF1Q8WYP5 2266 aa0.47□□□□□ -2.33
SCAPER-213ENST00000564757 ASXL3Q9C0F0 2248 aa0.46□□□□□ -2.34
SCAPER-213ENST00000564757 TCHHQ07283 1943 aa0.46□□□□□ -2.34
SCAPER-213ENST00000564757 IGSF10Q6WRI0 2623 aa0.46□□□□□ -2.34
SCAPER-213ENST00000564757 UBE2L5PA0A1B0GUS4 154 aa0.46□□□□□ -2.34
SCAPER-213ENST00000564757 CORTO00230 105 aa0.46□□□□□ -2.34
SCAPER-213ENST00000564757 ATP5EP56381 51 aaPredicted RBP0.46□□□□□ -2.34
SCAPER-213ENST00000564757 UBE2L3P68036 154 aaKnown RBP0.46□□□□□ -2.34
SCAPER-213ENST00000564757 BAGE2Q86Y30 109 aa0.46□□□□□ -2.34
SCAPER-213ENST00000564757 NDUFA4L2Q9NRX3 87 aa0.46□□□□□ -2.34
SCAPER-213ENST00000564757 IER3IP1Q9Y5U9 82 aa0.46□□□□□ -2.34
SCAPER-213ENST00000564757 CUL7Q14999 1698 aa0.46□□□□□ -2.34
SCAPER-213ENST00000564757 CACNA1CQ13936 2221 aa0.45□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms