RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 BAGE3Q86Y29 109 aa1.32□□□□□ -2.2
SHCBP1-202ENST00000563219 BAGE2Q86Y30 109 aa1.32□□□□□ -2.2
SHCBP1-202ENST00000563219 C14orf132Q9NPU4 83 aa1.32□□□□□ -2.2
SHCBP1-202ENST00000563219 HIGD1BQ9P298 99 aa1.32□□□□□ -2.2
SHCBP1-202ENST00000563219 GNG13Q9P2W3 67 aa1.32□□□□□ -2.2
SHCBP1-202ENST00000563219 ARL2-SNX15V9GYD0 113 aa1.32□□□□□ -2.2
SHCBP1-202ENST00000563219 PIK3C2BO00750 1634 aa1.32□□□□□ -2.2
SHCBP1-202ENST00000563219 CFAP43Q8NDM7 1665 aa1.32□□□□□ -2.2
SHCBP1-202ENST00000563219 ITSN1Q15811 1721 aa1.32□□□□□ -2.2
SHCBP1-202ENST00000563219 LAMB1P07942 1786 aa1.31□□□□□ -2.2
SHCBP1-202ENST00000563219 COL11A1P12107 1806 aaPredicted RBP1.31□□□□□ -2.2
SHCBP1-202ENST00000563219 DOCK2Q92608 1830 aa1.31□□□□□ -2.2
SHCBP1-202ENST00000563219 RP1P56715 2156 aa1.31□□□□□ -2.2
SHCBP1-202ENST00000563219 DIP2CQ9Y2E4 1556 aa1.31□□□□□ -2.2
SHCBP1-202ENST00000563219 TANC2Q9HCD6 1990 aa1.31□□□□□ -2.2
SHCBP1-202ENST00000563219 RAPGEF6Q8TEU7 1601 aa1.31□□□□□ -2.2
SHCBP1-202ENST00000563219 A0A0G2JND7 137 aa1.31□□□□□ -2.2
SHCBP1-202ENST00000563219 TRBV10-3A0A0K0K1G6 114 aa1.31□□□□□ -2.2
SHCBP1-202ENST00000563219 LOC285095A0A1B0GVY8 99 aa1.31□□□□□ -2.2
SHCBP1-202ENST00000563219 C5orf67F2Z3F1 127 aa1.31□□□□□ -2.2
SHCBP1-202ENST00000563219 FXYD1O00168 92 aa1.31□□□□□ -2.2
SHCBP1-202ENST00000563219 PRB4P10163 310 aaPredicted RBP1.31□□□□□ -2.2
SHCBP1-202ENST00000563219 COX8AP10176 69 aa1.31□□□□□ -2.2
SHCBP1-202ENST00000563219 SPANXN5Q5MJ07 72 aa1.31□□□□□ -2.2
SHCBP1-202ENST00000563219 C1orf134Q5TEV5 83 aa1.31□□□□□ -2.2
SHCBP1-202ENST00000563219 Q8N814 137 aa1.31□□□□□ -2.2
SHCBP1-202ENST00000563219 TMEM254Q8TBM7 123 aa1.31□□□□□ -2.2
SHCBP1-202ENST00000563219 LINC01600Q96MT4 127 aa1.31□□□□□ -2.2
SHCBP1-202ENST00000563219 ODF3Q96PU9 254 aa1.31□□□□□ -2.2
SHCBP1-202ENST00000563219 LINC00474Q9P2X8 69 aa1.31□□□□□ -2.2
SHCBP1-202ENST00000563219 PRO1854Q9UHT4 67 aa1.31□□□□□ -2.2
SHCBP1-202ENST00000563219 V9GYH0 126 aa1.31□□□□□ -2.2
SHCBP1-202ENST00000563219 COL5A3P25940 1745 aaPredicted RBP1.31□□□□□ -2.2
SHCBP1-202ENST00000563219 COL24A1Q17RW2 1714 aa1.31□□□□□ -2.2
SHCBP1-202ENST00000563219 TNS1Q9HBL0 1735 aaKnown RBP1.31□□□□□ -2.2
SHCBP1-202ENST00000563219 RGPD2P0DJD1 1756 aa1.31□□□□□ -2.2
SHCBP1-202ENST00000563219 HMCN1Q96RW7 5635 aa1.31□□□□□ -2.2
SHCBP1-202ENST00000563219 PTPRFP10586 1907 aa1.3□□□□□ -2.2
SHCBP1-202ENST00000563219 CDK13Q14004 1512 aaKnown RBP1.3□□□□□ -2.2
SHCBP1-202ENST00000563219 UNC13BO14795 1591 aa1.3□□□□□ -2.2
SHCBP1-202ENST00000563219 MYO3AQ8NEV4 1616 aa1.3□□□□□ -2.2
SHCBP1-202ENST00000563219 RGPD1P0DJD0 1748 aa1.3□□□□□ -2.2
SHCBP1-202ENST00000563219 XRN1Q8IZH2 1706 aaKnown RBP1.3□□□□□ -2.2
SHCBP1-202ENST00000563219 A0A1B0GWA3 101 aa1.3□□□□□ -2.2
SHCBP1-202ENST00000563219 HCG22E2RYF7 251 aa1.3□□□□□ -2.2
SHCBP1-202ENST00000563219 H3BVH4 76 aa1.3□□□□□ -2.2
SHCBP1-202ENST00000563219 ERC2-IT1O76042 136 aa1.3□□□□□ -2.2
SHCBP1-202ENST00000563219 COX6CP09669 75 aa1.3□□□□□ -2.2
SHCBP1-202ENST00000563219 BAALC-AS2P0C853 105 aa1.3□□□□□ -2.2
SHCBP1-202ENST00000563219 C3orf79P0CE67 100 aa1.3□□□□□ -2.2
SHCBP1-202ENST00000563219 ROMO1P60602 79 aa1.3□□□□□ -2.2
SHCBP1-202ENST00000563219 ZNF818PQ6ZRF7 136 aa1.3□□□□□ -2.2
SHCBP1-202ENST00000563219 ZNF826PQ6ZT77 177 aa1.3□□□□□ -2.2
SHCBP1-202ENST00000563219 Q8IYB0 196 aa1.3□□□□□ -2.2
SHCBP1-202ENST00000563219 CLECL1Q8IZS7 167 aa1.3□□□□□ -2.2
SHCBP1-202ENST00000563219 TOMM5Q8N4H5 51 aa1.3□□□□□ -2.2
SHCBP1-202ENST00000563219 FAM103A1Q9BTL3 118 aaKnown RBP1.3□□□□□ -2.2
SHCBP1-202ENST00000563219 ZFC3H1O60293 1989 aaKnown RBP1.3□□□□□ -2.2
SHCBP1-202ENST00000563219 MCM3APO60318 1980 aa1.3□□□□□ -2.2
SHCBP1-202ENST00000563219 MED12LQ86YW9 2145 aa1.3□□□□□ -2.2
SHCBP1-202ENST00000563219 TET3O43151 1660 aa1.29□□□□□ -2.2
SHCBP1-202ENST00000563219 PREX1Q8TCU6 1659 aa1.29□□□□□ -2.2
SHCBP1-202ENST00000563219 ARFGEF2Q9Y6D5 1785 aa1.29□□□□□ -2.2
SHCBP1-202ENST00000563219 PLXNA1Q9UIW2 1896 aa1.29□□□□□ -2.2
SHCBP1-202ENST00000563219 MYO18AQ92614 2054 aaKnown RBP1.29□□□□□ -2.2
SHCBP1-202ENST00000563219 TRAV23DV6A0A075B6W5 121 aa1.29□□□□□ -2.2
SHCBP1-202ENST00000563219 TRBV7-1A0A0A6YYK4 115 aa1.29□□□□□ -2.2
SHCBP1-202ENST00000563219 ZNF815PA8K554 130 aa1.29□□□□□ -2.2
SHCBP1-202ENST00000563219 CEBPZOSA8MTT3 80 aa1.29□□□□□ -2.2
SHCBP1-202ENST00000563219 H7BZZ5 65 aa1.29□□□□□ -2.2
SHCBP1-202ENST00000563219 IGLV1-51P01701 117 aa1.29□□□□□ -2.2
SHCBP1-202ENST00000563219 HMGN2P05204 90 aaKnown RBP1.29□□□□□ -2.2
SHCBP1-202ENST00000563219 GCHFRP30047 84 aa1.29□□□□□ -2.2
SHCBP1-202ENST00000563219 DSCR4P56555 118 aaPredicted RBP1.29□□□□□ -2.2
SHCBP1-202ENST00000563219 EDDM3BP56851 147 aa1.29□□□□□ -2.2
SHCBP1-202ENST00000563219 KLKP1Q107X0 134 aa1.29□□□□□ -2.2
SHCBP1-202ENST00000563219 DEFB113Q30KQ7 82 aa1.29□□□□□ -2.2
SHCBP1-202ENST00000563219 C10orf128Q5T292 105 aa1.29□□□□□ -2.2
SHCBP1-202ENST00000563219 C2orf82Q6UX34 121 aa1.29□□□□□ -2.2
SHCBP1-202ENST00000563219 DEFB107AQ8IZN7 70 aa1.29□□□□□ -2.2
SHCBP1-202ENST00000563219 FAM19A2Q8N3H0 131 aa1.29□□□□□ -2.2
SHCBP1-202ENST00000563219 LIMD2Q9BT23 127 aa1.29□□□□□ -2.2
SHCBP1-202ENST00000563219 CDC42SE1Q9NRR8 79 aa1.29□□□□□ -2.2
SHCBP1-202ENST00000563219 CRCT1Q9UGL9 99 aa1.29□□□□□ -2.2
SHCBP1-202ENST00000563219 ASXL1Q8IXJ9 1541 aa1.29□□□□□ -2.2
SHCBP1-202ENST00000563219 DISP1Q96F81 1524 aa1.29□□□□□ -2.2
SHCBP1-202ENST00000563219 ITSN2Q9NZM3 1697 aa1.29□□□□□ -2.2
SHCBP1-202ENST00000563219 KDM3BQ7LBC6 1761 aa1.29□□□□□ -2.2
SHCBP1-202ENST00000563219 AFDNP55196 1824 aaKnown RBP1.29□□□□□ -2.2
SHCBP1-202ENST00000563219 TANC1Q9C0D5 1861 aa1.29□□□□□ -2.2
SHCBP1-202ENST00000563219 POLEQ07864 2286 aa1.28□□□□□ -2.2
SHCBP1-202ENST00000563219 TRBV25-1A0A075B6N4 114 aa1.28□□□□□ -2.2
SHCBP1-202ENST00000563219 TRAV10A0A0B4J240 114 aa1.28□□□□□ -2.2
SHCBP1-202ENST00000563219 MYMXA0A1B0GTQ4 84 aa1.28□□□□□ -2.2
SHCBP1-202ENST00000563219 C2orf70A6NJV1 201 aa1.28□□□□□ -2.2
SHCBP1-202ENST00000563219 IQCF6A8MYZ5 107 aa1.28□□□□□ -2.2
SHCBP1-202ENST00000563219 B4DSR2 109 aa1.28□□□□□ -2.2
SHCBP1-202ENST00000563219 E7EUB6 86 aa1.28□□□□□ -2.2
SHCBP1-202ENST00000563219 CHKB-CPT1BH3BT56 60 aa1.28□□□□□ -2.2
SHCBP1-202ENST00000563219 EFNA4P52798 201 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms