RNA–Protein interactions for RNA: ENST00000562601.5

CDH13-206, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-206ENST00000562601 RPL36AP83881 106 aaKnown RBP3.9□□□□□ -1.79
CDH13-206ENST00000562601 ADIRFQ15847 76 aa3.9□□□□□ -1.79
CDH13-206ENST00000562601 SERTAD4-AS1Q5TG53 156 aa3.9□□□□□ -1.79
CDH13-206ENST00000562601 FAM231DQ6ZW35 169 aa3.9□□□□□ -1.79
CDH13-206ENST00000562601 Q9HAA7 133 aa3.9□□□□□ -1.79
CDH13-206ENST00000562601 APOBP04114 4563 aaKnown RBP3.9□□□□□ -1.79
CDH13-206ENST00000562601 TRBV10-1A0A0K0K1A3 114 aa3.89□□□□□ -1.79
CDH13-206ENST00000562601 A8MWL6 223 aa3.89□□□□□ -1.79
CDH13-206ENST00000562601 TMEM262E9PQX1 116 aa3.89□□□□□ -1.79
CDH13-206ENST00000562601 M0QY20 66 aa3.89□□□□□ -1.79
CDH13-206ENST00000562601 TRGC1P0CF51 173 aa3.89□□□□□ -1.79
CDH13-206ENST00000562601 CTRLP40313 264 aa3.89□□□□□ -1.79
CDH13-206ENST00000562601 CAMPP49913 170 aa3.89□□□□□ -1.79
CDH13-206ENST00000562601 RAB14P61106 215 aa3.89□□□□□ -1.79
CDH13-206ENST00000562601 IFITM2Q01629 132 aa3.89□□□□□ -1.79
CDH13-206ENST00000562601 LINC01556Q5JQF7 62 aa3.89□□□□□ -1.79
CDH13-206ENST00000562601 Q6ZRN7 208 aaPredicted RBP3.89□□□□□ -1.79
CDH13-206ENST00000562601 SPATA12Q7Z6I5 190 aa3.89□□□□□ -1.79
CDH13-206ENST00000562601 DAZ4Q86SG3 579 aaKnown RBP3.89□□□□□ -1.79
CDH13-206ENST00000562601 OR10G8Q8NGN5 311 aa3.89□□□□□ -1.79
CDH13-206ENST00000562601 ISOC2Q96AB3 205 aa3.89□□□□□ -1.79
CDH13-206ENST00000562601 DNAJC30Q96LL9 226 aa3.89□□□□□ -1.79
CDH13-206ENST00000562601 DPH3P1Q9H4G8 78 aa3.89□□□□□ -1.79
CDH13-206ENST00000562601 DAZ3Q9NR90 486 aaKnown RBP3.89□□□□□ -1.79
CDH13-206ENST00000562601 OSTCQ9NRP0 149 aa3.89□□□□□ -1.79
CDH13-206ENST00000562601 NAT8Q9UHE5 227 aa3.89□□□□□ -1.79
CDH13-206ENST00000562601 DNAH8Q96JB1 4490 aa3.88□□□□□ -1.79
CDH13-206ENST00000562601 A0A087WWC5 75 aa3.88□□□□□ -1.79
CDH13-206ENST00000562601 HIGD1CA8MV81 97 aa3.88□□□□□ -1.79
CDH13-206ENST00000562601 IBA57-AS1B1ANH7 110 aa3.88□□□□□ -1.79
CDH13-206ENST00000562601 NDUFS6O75380 124 aaKnown RBP3.88□□□□□ -1.79
CDH13-206ENST00000562601 FAM74A3Q4VXF1 159 aa3.88□□□□□ -1.79
CDH13-206ENST00000562601 WDR73Q6P4I2 378 aa3.88□□□□□ -1.79
CDH13-206ENST00000562601 NTM-AS1Q6ZSK4 140 aa3.88□□□□□ -1.79
CDH13-206ENST00000562601 C10orf126Q8N4M7 172 aa3.88□□□□□ -1.79
CDH13-206ENST00000562601 C15orf54Q8N8G6 183 aa3.88□□□□□ -1.79
CDH13-206ENST00000562601 GATD1Q8NB37 220 aa3.88□□□□□ -1.79
CDH13-206ENST00000562601 TSKUQ8WUA8 353 aa3.88□□□□□ -1.79
CDH13-206ENST00000562601 RPL39LQ96EH5 51 aaKnown RBP3.88□□□□□ -1.79
CDH13-206ENST00000562601 V9GYV3 84 aa3.88□□□□□ -1.79
CDH13-206ENST00000562601 HSPG2P98160 4391 aa3.87□□□□□ -1.79
CDH13-206ENST00000562601 A0A087WX48 190 aa3.87□□□□□ -1.79
CDH13-206ENST00000562601 TRBV6-8A0A0A6YYG3 113 aa3.87□□□□□ -1.79
CDH13-206ENST00000562601 C16orf90A8MZG2 172 aa3.87□□□□□ -1.79
CDH13-206ENST00000562601 H7C1H1 209 aa3.87□□□□□ -1.79
CDH13-206ENST00000562601 PSCAO43653 123 aa3.87□□□□□ -1.79
CDH13-206ENST00000562601 GAS8-AS1O95177 125 aa3.87□□□□□ -1.79
CDH13-206ENST00000562601 GAGE6Q13070 117 aa3.87□□□□□ -1.79
CDH13-206ENST00000562601 RASL11AQ6T310 242 aa3.87□□□□□ -1.79
CDH13-206ENST00000562601 SMIM15Q7Z3B0 74 aa3.87□□□□□ -1.79
CDH13-206ENST00000562601 NFE4Q86UQ8 179 aa3.87□□□□□ -1.79
CDH13-206ENST00000562601 NIT1Q86X76 327 aa3.87□□□□□ -1.79
CDH13-206ENST00000562601 NUP35Q8NFH5 326 aa3.87□□□□□ -1.79
CDH13-206ENST00000562601 BORCS7Q96B45 105 aa3.87□□□□□ -1.79
CDH13-206ENST00000562601 CHCHD5Q9BSY4 110 aa3.87□□□□□ -1.79
CDH13-206ENST00000562601 CNFNQ9BYD5 112 aa3.87□□□□□ -1.79
CDH13-206ENST00000562601 KLK12Q9UKR0 248 aa3.87□□□□□ -1.79
CDH13-206ENST00000562601 URGCP-MRPS24S4R325 110 aa3.87□□□□□ -1.79
CDH13-206ENST00000562601 A0A087WTM6 91 aa3.86□□□□□ -1.79
CDH13-206ENST00000562601 A0A1B0GUT8 65 aa3.86□□□□□ -1.79
CDH13-206ENST00000562601 SMKR1H3BMG3 65 aa3.86□□□□□ -1.79
CDH13-206ENST00000562601 LECT2O14960 151 aa3.86□□□□□ -1.79
CDH13-206ENST00000562601 MPV17L2Q567V2 206 aa3.86□□□□□ -1.79
CDH13-206ENST00000562601 CLLU1Q5K131 121 aa3.86□□□□□ -1.79
CDH13-206ENST00000562601 KCNIP4Q6PIL6 250 aa3.86□□□□□ -1.79
CDH13-206ENST00000562601 ATRAIDQ6UW56 229 aa3.86□□□□□ -1.79
CDH13-206ENST00000562601 Q8N976 141 aa3.86□□□□□ -1.79
CDH13-206ENST00000562601 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.86□□□□□ -1.79
CDH13-206ENST00000562601 UBE2WQ96B02 151 aa3.86□□□□□ -1.79
CDH13-206ENST00000562601 GFRA4Q9GZZ7 299 aa3.86□□□□□ -1.79
CDH13-206ENST00000562601 SMDT1Q9H4I9 107 aa3.86□□□□□ -1.79
CDH13-206ENST00000562601 NIT2Q9NQR4 276 aa3.86□□□□□ -1.79
CDH13-206ENST00000562601 ABCA13Q86UQ4 5058 aa3.85□□□□□ -1.79
CDH13-206ENST00000562601 PCLOQ9Y6V0 5065 aa3.85□□□□□ -1.79
CDH13-206ENST00000562601 TRBV25-1A0A075B6N4 114 aa3.85□□□□□ -1.79
CDH13-206ENST00000562601 IGKV2D-24A0A075B6R9 120 aa3.85□□□□□ -1.79
CDH13-206ENST00000562601 IGHV1-24A0A0C4DH33 117 aa3.85□□□□□ -1.79
CDH13-206ENST00000562601 SMIM27A0A1W2PRY6 76 aa3.85□□□□□ -1.79
CDH13-206ENST00000562601 K7EP13 123 aa3.85□□□□□ -1.79
CDH13-206ENST00000562601 NCR2O95944 276 aa3.85□□□□□ -1.79
CDH13-206ENST00000562601 ANGP03950 147 aaKnown RBP3.85□□□□□ -1.79
CDH13-206ENST00000562601 RIGQ13278 110 aa3.85□□□□□ -1.79
CDH13-206ENST00000562601 WFDC2Q14508 124 aa3.85□□□□□ -1.79
CDH13-206ENST00000562601 MRPL54Q6P161 138 aaKnown RBP3.85□□□□□ -1.79
CDH13-206ENST00000562601 CLPSL2Q6UWE3 100 aa3.85□□□□□ -1.79
CDH13-206ENST00000562601 AMN1Q8IY45 258 aa3.85□□□□□ -1.79
CDH13-206ENST00000562601 MAPKAPK5-AS1Q8N8E1 139 aa3.85□□□□□ -1.79
CDH13-206ENST00000562601 RNF185Q96GF1 192 aa3.85□□□□□ -1.79
CDH13-206ENST00000562601 NAT8BQ9UHF3 227 aa3.85□□□□□ -1.79
CDH13-206ENST00000562601 TRAV8-3A0A0A6YYJ7 113 aa3.84□□□□□ -1.79
CDH13-206ENST00000562601 LRCOL1A6NCL2 159 aa3.84□□□□□ -1.79
CDH13-206ENST00000562601 FAM231BA6NCW3 169 aa3.84□□□□□ -1.79
CDH13-206ENST00000562601 RAB4AP20338 218 aa3.84□□□□□ -1.79
CDH13-206ENST00000562601 RPS10P46783 165 aaKnown RBP3.84□□□□□ -1.79
CDH13-206ENST00000562601 AMTP48728 403 aa3.84□□□□□ -1.79
CDH13-206ENST00000562601 RBX1P62877 108 aa3.84□□□□□ -1.79
CDH13-206ENST00000562601 LAGE3Q14657 143 aa3.84□□□□□ -1.79
CDH13-206ENST00000562601 IQCJQ1A5X6 159 aa3.84□□□□□ -1.79
CDH13-206ENST00000562601 TMEM97Q5BJF2 176 aa3.84□□□□□ -1.79
CDH13-206ENST00000562601 ENHOQ6UWT2 76 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms