RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 AKAP14Q86UN6 197 aa6.7□□□□□ -1.34
CLK3-205ENST00000561673 DPH3P1Q9H4G8 78 aa6.7□□□□□ -1.34
CLK3-205ENST00000561673 USP17L23D6RBM5 183 aa6.69□□□□□ -1.34
CLK3-205ENST00000561673 HLA-DQA1P01909 254 aa6.69□□□□□ -1.34
CLK3-205ENST00000561673 CTRLP40313 264 aa6.69□□□□□ -1.34
CLK3-205ENST00000561673 TWIST1Q15672 202 aa6.69□□□□□ -1.34
CLK3-205ENST00000561673 KRTAP26-1Q6PEX3 210 aa6.69□□□□□ -1.34
CLK3-205ENST00000561673 ALKAL2Q6UX46 152 aa6.69□□□□□ -1.34
CLK3-205ENST00000561673 SCXQ7RTU7 201 aa6.69□□□□□ -1.34
CLK3-205ENST00000561673 DEFB104AQ8WTQ1 72 aa6.69□□□□□ -1.34
CLK3-205ENST00000561673 CHAC1Q9BUX1 264 aa6.69□□□□□ -1.34
CLK3-205ENST00000561673 CNFNQ9BYD5 112 aa6.69□□□□□ -1.34
CLK3-205ENST00000561673 RPP21Q9H633 154 aaKnown RBP6.69□□□□□ -1.34
CLK3-205ENST00000561673 NIT2Q9NQR4 276 aa6.69□□□□□ -1.34
CLK3-205ENST00000561673 PLA2G1BP04054 148 aaKnown RBP6.68□□□□□ -1.34
CLK3-205ENST00000561673 PRSS1P07477 247 aa6.68□□□□□ -1.34
CLK3-205ENST00000561673 BLOC1S1P78537 153 aa6.68□□□□□ -1.34
CLK3-205ENST00000561673 LYPD6BQ8NI32 183 aa6.68□□□□□ -1.34
CLK3-205ENST00000561673 GTSF1Q8WW33 167 aa6.68□□□□□ -1.34
CLK3-205ENST00000561673 TMEM243Q9BU79 118 aa6.68□□□□□ -1.34
CLK3-205ENST00000561673 DMBT1Q9UGM3 2413 aaPredicted RBP6.68□□□□□ -1.34
CLK3-205ENST00000561673 FLG2Q5D862 2391 aaPredicted RBP6.67□□□□□ -1.34
CLK3-205ENST00000561673 LRP1Q07954 4544 aaKnown RBP6.67□□□□□ -1.34
CLK3-205ENST00000561673 IGLV4-60A0A075B6I1 120 aa6.67□□□□□ -1.34
CLK3-205ENST00000561673 TRAV26-2A0A0B4J265 109 aa6.67□□□□□ -1.34
CLK3-205ENST00000561673 A0A1B0GUV1 79 aa6.67□□□□□ -1.34
CLK3-205ENST00000561673 FOXA3P55318 350 aaPredicted RBP6.67□□□□□ -1.34
CLK3-205ENST00000561673 REG3AQ06141 175 aa6.67□□□□□ -1.34
CLK3-205ENST00000561673 GATD1Q8NB37 220 aa6.67□□□□□ -1.34
CLK3-205ENST00000561673 C20orf203Q8NBC4 194 aa6.67□□□□□ -1.34
CLK3-205ENST00000561673 CIRBP-AS1Q8TBR5 109 aa6.67□□□□□ -1.34
CLK3-205ENST00000561673 PGLYRP4Q96LB8 373 aa6.67□□□□□ -1.34
CLK3-205ENST00000561673 FAT3Q8TDW7 4589 aa6.67□□□□□ -1.34
CLK3-205ENST00000561673 IGLV10-54A0A075B6I4 117 aa6.66□□□□□ -1.34
CLK3-205ENST00000561673 TMEM250H0YL14 139 aa6.66□□□□□ -1.34
CLK3-205ENST00000561673 DGAT2L7PQ6IED9 249 aa6.66□□□□□ -1.34
CLK3-205ENST00000561673 GFRA4Q9GZZ7 299 aa6.66□□□□□ -1.34
CLK3-205ENST00000561673 PKHD1L1Q86WI1 4243 aa6.65□□□□□ -1.34
CLK3-205ENST00000561673 GATCO43716 136 aaKnown RBP6.65□□□□□ -1.34
CLK3-205ENST00000561673 AMTP48728 403 aa6.65□□□□□ -1.34
CLK3-205ENST00000561673 CEBPGP53567 150 aa6.65□□□□□ -1.34
CLK3-205ENST00000561673 COTL1Q14019 142 aa6.65□□□□□ -1.34
CLK3-205ENST00000561673 TRAV8-4A0A0B4J246 113 aa6.64□□□□□ -1.35
CLK3-205ENST00000561673 A8MWL6 223 aa6.64□□□□□ -1.35
CLK3-205ENST00000561673 UBE2L6O14933 153 aa6.64□□□□□ -1.35
CLK3-205ENST00000561673 KRTAP10-4P60372 401 aaPredicted RBP6.64□□□□□ -1.35
CLK3-205ENST00000561673 FAM231DQ6ZW35 169 aa6.64□□□□□ -1.35
CLK3-205ENST00000561673 SMIM15Q7Z3B0 74 aa6.64□□□□□ -1.35
CLK3-205ENST00000561673 C9orf163Q8N9P6 203 aa6.64□□□□□ -1.35
CLK3-205ENST00000561673 RPL39LQ96EH5 51 aaKnown RBP6.64□□□□□ -1.35
CLK3-205ENST00000561673 CT83Q5H943 113 aa6.63□□□□□ -1.35
CLK3-205ENST00000561673 EIF5A2Q9GZV4 153 aaKnown RBP6.63□□□□□ -1.35
CLK3-205ENST00000561673 hDV102S1A0JD36 115 aa6.62□□□□□ -1.35
CLK3-205ENST00000561673 TEX261Q6UWH6 196 aa6.62□□□□□ -1.35
CLK3-205ENST00000561673 SDIM1Q6ZPB5 146 aa6.62□□□□□ -1.35
CLK3-205ENST00000561673 LINC01551Q86U37 167 aa6.62□□□□□ -1.35
CLK3-205ENST00000561673 SMIM7Q9BQ49 75 aa6.62□□□□□ -1.35
CLK3-205ENST00000561673 A0A1B0GVG6 124 aa6.61□□□□□ -1.35
CLK3-205ENST00000561673 SDHAF1A6NFY7 115 aa6.61□□□□□ -1.35
CLK3-205ENST00000561673 PANO1I0J062 215 aa6.61□□□□□ -1.35
CLK3-205ENST00000561673 NDUFS6O75380 124 aaKnown RBP6.61□□□□□ -1.35
CLK3-205ENST00000561673 NCR2O95944 276 aa6.61□□□□□ -1.35
CLK3-205ENST00000561673 SLPIP03973 132 aa6.61□□□□□ -1.35
CLK3-205ENST00000561673 CNBPP62633 177 aaKnown RBP6.61□□□□□ -1.35
CLK3-205ENST00000561673 FAM210AQ96ND0 272 aa6.61□□□□□ -1.35
CLK3-205ENST00000561673 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.61□□□□□ -1.35
CLK3-205ENST00000561673 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.6□□□□□ -1.35
CLK3-205ENST00000561673 IGKV3OR2-268A0A0C4DH90 116 aa6.6□□□□□ -1.35
CLK3-205ENST00000561673 IGKV2-29A2NJV5 120 aaPredicted RBP6.6□□□□□ -1.35
CLK3-205ENST00000561673 ZNF727A8MUV8 499 aa6.6□□□□□ -1.35
CLK3-205ENST00000561673 HIGD1CA8MV81 97 aa6.6□□□□□ -1.35
CLK3-205ENST00000561673 KRTAP29-1A8MX34 341 aaPredicted RBP6.6□□□□□ -1.35
CLK3-205ENST00000561673 GAS8-AS1O95177 125 aa6.6□□□□□ -1.35
CLK3-205ENST00000561673 SRP19P09132 144 aaKnown RBP6.6□□□□□ -1.35
CLK3-205ENST00000561673 TSKUQ8WUA8 353 aa6.6□□□□□ -1.35
CLK3-205ENST00000561673 TRBV6-5A0A0K0K1A5 114 aa6.59□□□□□ -1.35
CLK3-205ENST00000561673 A0A1B0GUT8 65 aa6.59□□□□□ -1.35
CLK3-205ENST00000561673 FAM231BA6NCW3 169 aa6.59□□□□□ -1.35
CLK3-205ENST00000561673 GAGE12HA6NDE8 117 aa6.59□□□□□ -1.35
CLK3-205ENST00000561673 H7C423 109 aa6.59□□□□□ -1.35
CLK3-205ENST00000561673 I3L3M4 83 aa6.59□□□□□ -1.35
CLK3-205ENST00000561673 APCSP02743 223 aa6.59□□□□□ -1.35
CLK3-205ENST00000561673 PMCHP20382 165 aa6.59□□□□□ -1.35
CLK3-205ENST00000561673 AMMECR1LQ6DCA0 310 aa6.59□□□□□ -1.35
CLK3-205ENST00000561673 RNASEKQ6P5S7 137 aaKnown RBP6.59□□□□□ -1.35
CLK3-205ENST00000561673 SVIPQ8NHG7 77 aa6.59□□□□□ -1.35
CLK3-205ENST00000561673 BORCS7Q96B45 105 aa6.59□□□□□ -1.35
CLK3-205ENST00000561673 OSTCQ9NRP0 149 aa6.59□□□□□ -1.35
CLK3-205ENST00000561673 FGF6P10767 208 aa6.58□□□□□ -1.36
CLK3-205ENST00000561673 RAB4AP20338 218 aa6.58□□□□□ -1.36
CLK3-205ENST00000561673 C15orf56Q8N910 161 aa6.58□□□□□ -1.36
CLK3-205ENST00000561673 CHCHD10Q8WYQ3 142 aaPredicted RBP6.58□□□□□ -1.36
CLK3-205ENST00000561673 RNF185Q96GF1 192 aa6.58□□□□□ -1.36
CLK3-205ENST00000561673 TMEM191AQ9H0A3 160 aa6.58□□□□□ -1.36
CLK3-205ENST00000561673 ST20Q9HBF5 79 aa6.58□□□□□ -1.36
CLK3-205ENST00000561673 IGHV3-64A0A075B6Q5 118 aa6.57□□□□□ -1.36
CLK3-205ENST00000561673 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.57□□□□□ -1.36
CLK3-205ENST00000561673 TSHBP01222 138 aa6.57□□□□□ -1.36
CLK3-205ENST00000561673 RPS10P46783 165 aaKnown RBP6.57□□□□□ -1.36
CLK3-205ENST00000561673 RPL37AP61513 92 aaKnown RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms