RNA–Protein interactions for RNA: ENST00000561377.1

HMBOX1-216, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 307 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-216ENST00000561377 NEFHP12036 1026 aa-0.33□□□□□ -2.46
HMBOX1-216ENST00000561377 CCL18P55774 89 aa-0.33□□□□□ -2.46
HMBOX1-216ENST00000561377 RRAS2P62070 204 aaPredicted RBP-0.33□□□□□ -2.46
HMBOX1-216ENST00000561377 COX17Q14061 63 aa-0.33□□□□□ -2.46
HMBOX1-216ENST00000561377 ALX1Q15699 326 aa-0.33□□□□□ -2.46
HMBOX1-216ENST00000561377 C10orf82Q8WW14 230 aa-0.33□□□□□ -2.46
HMBOX1-216ENST00000561377 SELENOSQ9BQE4 189 aa-0.33□□□□□ -2.46
HMBOX1-216ENST00000561377 AIF1LQ9BQI0 150 aa-0.33□□□□□ -2.46
HMBOX1-216ENST00000561377 PSMG3Q9BT73 122 aaPredicted RBP-0.33□□□□□ -2.46
HMBOX1-216ENST00000561377 GSKIPQ9P0R6 139 aa-0.33□□□□□ -2.46
HMBOX1-216ENST00000561377 R4GMQ9 66 aa-0.33□□□□□ -2.46
HMBOX1-216ENST00000561377 FAT2Q9NYQ8 4349 aa-0.33□□□□□ -2.46
HMBOX1-216ENST00000561377 KDM3BQ7LBC6 1761 aa-0.33□□□□□ -2.46
HMBOX1-216ENST00000561377 PRG4Q92954 1404 aaPredicted RBP-0.33□□□□□ -2.46
HMBOX1-216ENST00000561377 ERCC6L2Q5T890 1561 aa-0.33□□□□□ -2.46
HMBOX1-216ENST00000561377 TGP01266 2768 aa-0.34□□□□□ -2.46
HMBOX1-216ENST00000561377 SPAARA0A1B0GVQ0 90 aa-0.34□□□□□ -2.46
HMBOX1-216ENST00000561377 J3QR89 54 aa-0.34□□□□□ -2.46
HMBOX1-216ENST00000561377 NDUFB6O95139 128 aa-0.34□□□□□ -2.46
HMBOX1-216ENST00000561377 IL5P05113 134 aa-0.34□□□□□ -2.46
HMBOX1-216ENST00000561377 SCGB1A1P11684 91 aa-0.34□□□□□ -2.46
HMBOX1-216ENST00000561377 MYOM3Q5VTT5 1437 aa-0.34□□□□□ -2.46
HMBOX1-216ENST00000561377 Q6ZUT4 128 aa-0.34□□□□□ -2.46
HMBOX1-216ENST00000561377 CASKIN1Q8WXD9 1431 aa-0.34□□□□□ -2.46
HMBOX1-216ENST00000561377 SPTSSAQ969W0 71 aa-0.34□□□□□ -2.46
HMBOX1-216ENST00000561377 NPVFQ9HCQ7 196 aa-0.34□□□□□ -2.46
HMBOX1-216ENST00000561377 NWD2Q9ULI1 1742 aa-0.34□□□□□ -2.46
HMBOX1-216ENST00000561377 LENEPQ9Y5L5 61 aa-0.34□□□□□ -2.46
HMBOX1-216ENST00000561377 MYH9P35579 1960 aaKnown RBP-0.34□□□□□ -2.46
HMBOX1-216ENST00000561377 ARHGEF10O15013 1369 aa-0.34□□□□□ -2.46
HMBOX1-216ENST00000561377 MUC22E2RYF6 1773 aaPredicted RBP-0.34□□□□□ -2.46
HMBOX1-216ENST00000561377 ZNF518AQ6AHZ1 1483 aa-0.35□□□□□ -2.46
HMBOX1-216ENST00000561377 TRBV6-1A0A0K0K1D8 114 aa-0.35□□□□□ -2.47
HMBOX1-216ENST00000561377 LOC730098B7Z3J9 87 aa-0.35□□□□□ -2.47
HMBOX1-216ENST00000561377 I3L2K1 104 aa-0.35□□□□□ -2.47
HMBOX1-216ENST00000561377 BCE1O60756 84 aa-0.35□□□□□ -2.47
HMBOX1-216ENST00000561377 SNCGO76070 127 aa-0.35□□□□□ -2.47
HMBOX1-216ENST00000561377 COX6B1P14854 86 aa-0.35□□□□□ -2.47
HMBOX1-216ENST00000561377 GUCA1AP43080 201 aaPredicted RBP-0.35□□□□□ -2.47
HMBOX1-216ENST00000561377 UBE2G1P62253 170 aa-0.35□□□□□ -2.47
HMBOX1-216ENST00000561377 HAMPP81172 84 aa-0.35□□□□□ -2.47
HMBOX1-216ENST00000561377 MIC13Q5XKP0 118 aa-0.35□□□□□ -2.47
HMBOX1-216ENST00000561377 AQP10Q96PS8 301 aa-0.35□□□□□ -2.47
HMBOX1-216ENST00000561377 LRP1BQ9NZR2 4599 aa-0.35□□□□□ -2.47
HMBOX1-216ENST00000561377 PAPPAQ13219 1627 aa-0.35□□□□□ -2.47
HMBOX1-216ENST00000561377 MRC1P22897 1456 aa-0.35□□□□□ -2.47
HMBOX1-216ENST00000561377 SYNJ1O43426 1573 aa-0.36□□□□□ -2.47
HMBOX1-216ENST00000561377 WNK3Q9BYP7 1800 aa-0.36□□□□□ -2.47
HMBOX1-216ENST00000561377 CSPG4Q6UVK1 2322 aa-0.36□□□□□ -2.47
HMBOX1-216ENST00000561377 FHAD1B1AJZ9 1412 aa-0.36□□□□□ -2.47
HMBOX1-216ENST00000561377 PKHD1P08F94 4074 aa-0.36□□□□□ -2.47
HMBOX1-216ENST00000561377 FXYD6-FXYD2A0A087WZ82 144 aa-0.36□□□□□ -2.47
HMBOX1-216ENST00000561377 M0R135 149 aa-0.36□□□□□ -2.47
HMBOX1-216ENST00000561377 SPINK4O60575 86 aa-0.36□□□□□ -2.47
HMBOX1-216ENST00000561377 SIX6O95475 246 aa-0.36□□□□□ -2.47
HMBOX1-216ENST00000561377 PPP1R17O96001 155 aa-0.36□□□□□ -2.47
HMBOX1-216ENST00000561377 C12orf73Q69YU5 71 aa-0.36□□□□□ -2.47
HMBOX1-216ENST00000561377 TAC4Q86UU9 113 aa-0.36□□□□□ -2.47
HMBOX1-216ENST00000561377 PYDC1Q8WXC3 89 aa-0.36□□□□□ -2.47
HMBOX1-216ENST00000561377 TCEAL4Q96EI5 215 aa-0.36□□□□□ -2.47
HMBOX1-216ENST00000561377 LINC00312Q9Y6C7 94 aa-0.36□□□□□ -2.47
HMBOX1-216ENST00000561377 LAMC1P11047 1609 aa-0.36□□□□□ -2.47
HMBOX1-216ENST00000561377 IQSEC2Q5JU85 1478 aa-0.36□□□□□ -2.47
HMBOX1-216ENST00000561377 ARFGEF1Q9Y6D6 1849 aa-0.36□□□□□ -2.47
HMBOX1-216ENST00000561377 MYH13Q9UKX3 1938 aa-0.36□□□□□ -2.47
HMBOX1-216ENST00000561377 PRKDCP78527 4128 aaKnown RBP-0.36□□□□□ -2.47
HMBOX1-216ENST00000561377 SETD2Q9BYW2 2564 aaPredicted RBP-0.37□□□□□ -2.47
HMBOX1-216ENST00000561377 PLCE1Q9P212 2302 aa-0.37□□□□□ -2.47
HMBOX1-216ENST00000561377 PRDM2Q13029 1718 aa-0.37□□□□□ -2.47
HMBOX1-216ENST00000561377 TRAV13-2A0A0B4J235 113 aa-0.37□□□□□ -2.47
HMBOX1-216ENST00000561377 CTXND1A0A1B0GTU2 59 aa-0.37□□□□□ -2.47
HMBOX1-216ENST00000561377 FAM236AA0A1B0GUQ0 79 aa-0.37□□□□□ -2.47
HMBOX1-216ENST00000561377 FAM236BA0A1B0GV22 79 aa-0.37□□□□□ -2.47
HMBOX1-216ENST00000561377 APOC3P02656 99 aa-0.37□□□□□ -2.47
HMBOX1-216ENST00000561377 IGLC6P0CF74 106 aa-0.37□□□□□ -2.47
HMBOX1-216ENST00000561377 TPPP2P59282 170 aa-0.37□□□□□ -2.47
HMBOX1-216ENST00000561377 DEFB123Q8N688 67 aa-0.37□□□□□ -2.47
HMBOX1-216ENST00000561377 SPTSSBQ8NFR3 76 aa-0.37□□□□□ -2.47
HMBOX1-216ENST00000561377 COPS9Q8WXC6 57 aa-0.37□□□□□ -2.47
HMBOX1-216ENST00000561377 AMELXQ99217 191 aa-0.37□□□□□ -2.47
HMBOX1-216ENST00000561377 SDF2Q99470 211 aa-0.37□□□□□ -2.47
HMBOX1-216ENST00000561377 SEC11CQ9BY50 192 aa-0.37□□□□□ -2.47
HMBOX1-216ENST00000561377 TMEM191AQ9H0A3 160 aa-0.37□□□□□ -2.47
HMBOX1-216ENST00000561377 AGPAT4-IT1Q9H0P7 198 aa-0.37□□□□□ -2.47
HMBOX1-216ENST00000561377 CCDC167Q9P0B6 97 aa-0.37□□□□□ -2.47
HMBOX1-216ENST00000561377 V9GYH0 126 aa-0.37□□□□□ -2.47
HMBOX1-216ENST00000561377 GAPVD1Q14C86 1478 aa-0.37□□□□□ -2.47
HMBOX1-216ENST00000561377 SHANK2Q9UPX8 1470 aa-0.37□□□□□ -2.47
HMBOX1-216ENST00000561377 MXRA5Q9NR99 2828 aa-0.37□□□□□ -2.47
HMBOX1-216ENST00000561377 PPIP5K1Q6PFW1 1433 aa-0.38□□□□□ -2.47
HMBOX1-216ENST00000561377 M0R2Z0 102 aa-0.38□□□□□ -2.47
HMBOX1-216ENST00000561377 UQCR11O14957 56 aa-0.38□□□□□ -2.47
HMBOX1-216ENST00000561377 PITX3O75364 302 aa-0.38□□□□□ -2.47
HMBOX1-216ENST00000561377 TMEM170BQ5T4T1 132 aa-0.38□□□□□ -2.47
HMBOX1-216ENST00000561377 Q6JHZ5 121 aa-0.38□□□□□ -2.47
HMBOX1-216ENST00000561377 SPAG11AQ6PDA7 123 aa-0.38□□□□□ -2.47
HMBOX1-216ENST00000561377 KCNRGQ8N5I3 272 aa-0.38□□□□□ -2.47
HMBOX1-216ENST00000561377 URB1O60287 2271 aaKnown RBP-0.38□□□□□ -2.47
HMBOX1-216ENST00000561377 CNOT1A5YKK6 2376 aaKnown RBP-0.38□□□□□ -2.47
HMBOX1-216ENST00000561377 FLGP20930 4061 aaPredicted RBP-0.38□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms