RNA–Protein interactions for RNA: ENST00000561116.5

FAM227B-213, Transcript of family with sequence similarity 227 member B, humanhuman

TSL 3

Gene FAM227B, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM227B-213ENST00000561116 SNAPC5O75971 98 aa0.51□□□□□ -2.33
FAM227B-213ENST00000561116 APOC2P02655 101 aa0.51□□□□□ -2.33
FAM227B-213ENST00000561116 SMIM6P0DI80 62 aa0.51□□□□□ -2.33
FAM227B-213ENST00000561116 RGPD2P0DJD1 1756 aa0.51□□□□□ -2.33
FAM227B-213ENST00000561116 S100A1P23297 94 aa0.51□□□□□ -2.33
FAM227B-213ENST00000561116 S100PP25815 95 aa0.51□□□□□ -2.33
FAM227B-213ENST00000561116 ATP5EP56381 51 aaPredicted RBP0.51□□□□□ -2.33
FAM227B-213ENST00000561116 RBM3P98179 157 aaKnown RBP0.51□□□□□ -2.33
FAM227B-213ENST00000561116 SSBP1Q04837 148 aaKnown RBP0.51□□□□□ -2.33
FAM227B-213ENST00000561116 C2CD3Q4AC94 2353 aa0.51□□□□□ -2.33
FAM227B-213ENST00000561116 Q6AWC8 147 aa0.51□□□□□ -2.33
FAM227B-213ENST00000561116 C8orf59Q8N0T1 100 aaPredicted RBP0.51□□□□□ -2.33
FAM227B-213ENST00000561116 Q8N8P6 123 aa0.51□□□□□ -2.33
FAM227B-213ENST00000561116 COX7B2Q8TF08 81 aa0.51□□□□□ -2.33
FAM227B-213ENST00000561116 PXDNQ92626 1479 aa0.51□□□□□ -2.33
FAM227B-213ENST00000561116 PPP3R2Q96LZ3 170 aa0.51□□□□□ -2.33
FAM227B-213ENST00000561116 AQP10Q96PS8 301 aa0.51□□□□□ -2.33
FAM227B-213ENST00000561116 LAMC3Q9Y6N6 1575 aa0.51□□□□□ -2.33
FAM227B-213ENST00000561116 ZNF292O60281 2723 aa0.51□□□□□ -2.33
FAM227B-213ENST00000561116 SUPT6HQ7KZ85 1726 aaKnown RBP0.5□□□□□ -2.33
FAM227B-213ENST00000561116 PKD1L3Q7Z443 1732 aa0.5□□□□□ -2.33
FAM227B-213ENST00000561116 KDM5AP29375 1690 aaKnown RBP0.5□□□□□ -2.33
FAM227B-213ENST00000561116 MYOM1P52179 1685 aa0.5□□□□□ -2.33
FAM227B-213ENST00000561116 TOP2BQ02880 1626 aa0.5□□□□□ -2.33
FAM227B-213ENST00000561116 IFT140Q96RY7 1462 aa0.5□□□□□ -2.33
FAM227B-213ENST00000561116 MRC2Q9UBG0 1479 aa0.5□□□□□ -2.33
FAM227B-213ENST00000561116 APCP25054 2843 aa0.5□□□□□ -2.33
FAM227B-213ENST00000561116 POLQO75417 2590 aa0.5□□□□□ -2.33
FAM227B-213ENST00000561116 A0A087WTM6 91 aa0.5□□□□□ -2.33
FAM227B-213ENST00000561116 A0A096LNT2 108 aa0.5□□□□□ -2.33
FAM227B-213ENST00000561116 CLPSL1A2RUU4 121 aa0.5□□□□□ -2.33
FAM227B-213ENST00000561116 MIF4GDA9UHW6 222 aaKnown RBP0.5□□□□□ -2.33
FAM227B-213ENST00000561116 HCG22E2RYF7 251 aa0.5□□□□□ -2.33
FAM227B-213ENST00000561116 CORTO00230 105 aa0.5□□□□□ -2.33
FAM227B-213ENST00000561116 TNFP01375 233 aa0.5□□□□□ -2.33
FAM227B-213ENST00000561116 UBE2D1P51668 147 aa0.5□□□□□ -2.33
FAM227B-213ENST00000561116 PPP3R1P63098 170 aa0.5□□□□□ -2.33
FAM227B-213ENST00000561116 INSL4Q14641 139 aa0.5□□□□□ -2.33
FAM227B-213ENST00000561116 KRTAP21-1Q3LI58 79 aa0.5□□□□□ -2.33
FAM227B-213ENST00000561116 ZNF818PQ6ZRF7 136 aa0.5□□□□□ -2.33
FAM227B-213ENST00000561116 GTF2H5Q6ZYL4 71 aa0.5□□□□□ -2.33
FAM227B-213ENST00000561116 SPTBN2O15020 2390 aa0.5□□□□□ -2.33
FAM227B-213ENST00000561116 MDN1Q9NU22 5596 aa0.5□□□□□ -2.33
FAM227B-213ENST00000561116 ZNF236Q9UL36 1845 aa0.5□□□□□ -2.33
FAM227B-213ENST00000561116 USP24Q9UPU5 2620 aa0.5□□□□□ -2.33
FAM227B-213ENST00000561116 KIAA1551Q9HCM1 1747 aa0.5□□□□□ -2.33
FAM227B-213ENST00000561116 TRBV7-1A0A0A6YYK4 115 aa0.49□□□□□ -2.33
FAM227B-213ENST00000561116 C20orf202A1L168 122 aa0.49□□□□□ -2.33
FAM227B-213ENST00000561116 F2Z2F3 143 aa0.49□□□□□ -2.33
FAM227B-213ENST00000561116 SSSCA1O60232 199 aa0.49□□□□□ -2.33
FAM227B-213ENST00000561116 CCL8P80075 99 aa0.49□□□□□ -2.33
FAM227B-213ENST00000561116 CATR1Q13166 79 aa0.49□□□□□ -2.33
FAM227B-213ENST00000561116 MRPL54Q6P161 138 aaKnown RBP0.49□□□□□ -2.33
FAM227B-213ENST00000561116 SVBPQ8N300 66 aa0.49□□□□□ -2.33
FAM227B-213ENST00000561116 IER3IP1Q9Y5U9 82 aa0.49□□□□□ -2.33
FAM227B-213ENST00000561116 LINC00312Q9Y6C7 94 aa0.49□□□□□ -2.33
FAM227B-213ENST00000561116 V9GYV3 84 aa0.49□□□□□ -2.33
FAM227B-213ENST00000561116 ZFHX3Q15911 3703 aa0.49□□□□□ -2.33
FAM227B-213ENST00000561116 MON2Q7Z3U7 1717 aa0.49□□□□□ -2.33
FAM227B-213ENST00000561116 SCN7AQ01118 1682 aa0.49□□□□□ -2.33
FAM227B-213ENST00000561116 TNCP24821 2201 aa0.49□□□□□ -2.33
FAM227B-213ENST00000561116 ZFYVE16Q7Z3T8 1539 aa0.48□□□□□ -2.33
FAM227B-213ENST00000561116 PZPP20742 1482 aa0.48□□□□□ -2.33
FAM227B-213ENST00000561116 CHD9Q3L8U1 2897 aa0.48□□□□□ -2.33
FAM227B-213ENST00000561116 CPSF1Q10570 1443 aaKnown RBP0.48□□□□□ -2.33
FAM227B-213ENST00000561116 PPIP5K1Q6PFW1 1433 aa0.48□□□□□ -2.33
FAM227B-213ENST00000561116 ANKRD17O75179 2603 aaKnown RBP0.48□□□□□ -2.33
FAM227B-213ENST00000561116 TRAV13-2A0A0B4J235 113 aa0.48□□□□□ -2.33
FAM227B-213ENST00000561116 UBE2L5PA0A1B0GUS4 154 aa0.48□□□□□ -2.33
FAM227B-213ENST00000561116 FAM24AA6NFZ4 105 aa0.48□□□□□ -2.33
FAM227B-213ENST00000561116 OOSP1A8MZH6 123 aa0.48□□□□□ -2.33
FAM227B-213ENST00000561116 SIX6O95475 246 aa0.48□□□□□ -2.33
FAM227B-213ENST00000561116 EDDM3BP56851 147 aa0.48□□□□□ -2.33
FAM227B-213ENST00000561116 UBE2L3P68036 154 aaKnown RBP0.48□□□□□ -2.33
FAM227B-213ENST00000561116 C9orf153Q5TBE3 101 aa0.48□□□□□ -2.33
FAM227B-213ENST00000561116 MYOZ3Q8TDC0 251 aa0.48□□□□□ -2.33
FAM227B-213ENST00000561116 Q96NJ1 140 aa0.48□□□□□ -2.33
FAM227B-213ENST00000561116 CYP4F30PQ9H0H9 118 aa0.48□□□□□ -2.33
FAM227B-213ENST00000561116 RAPGEF6Q8TEU7 1601 aa0.48□□□□□ -2.33
FAM227B-213ENST00000561116 NCOR1O75376 2440 aa0.48□□□□□ -2.33
FAM227B-213ENST00000561116 DIP2CQ9Y2E4 1556 aa0.48□□□□□ -2.33
FAM227B-213ENST00000561116 ARHGAP5Q13017 1502 aa0.48□□□□□ -2.33
FAM227B-213ENST00000561116 CDK13Q14004 1512 aaKnown RBP0.48□□□□□ -2.33
FAM227B-213ENST00000561116 PKDREJQ9NTG1 2253 aa0.48□□□□□ -2.33
FAM227B-213ENST00000561116 BDP1A6H8Y1 2624 aa0.48□□□□□ -2.33
FAM227B-213ENST00000561116 USF3Q68DE3 2245 aa0.48□□□□□ -2.33
FAM227B-213ENST00000561116 FYCO1Q9BQS8 1478 aa0.48□□□□□ -2.33
FAM227B-213ENST00000561116 CASKIN1Q8WXD9 1431 aa0.47□□□□□ -2.33
FAM227B-213ENST00000561116 SPTA1P02549 2419 aa0.47□□□□□ -2.33
FAM227B-213ENST00000561116 CRYBG1Q9Y4K1 1723 aa0.47□□□□□ -2.33
FAM227B-213ENST00000561116 SHPRHQ149N8 1683 aa0.47□□□□□ -2.33
FAM227B-213ENST00000561116 ABCA12Q86UK0 2595 aa0.47□□□□□ -2.33
FAM227B-213ENST00000561116 DCDP81605 110 aaKnown RBP0.47□□□□□ -2.33
FAM227B-213ENST00000561116 COMMD6Q7Z4G1 85 aa0.47□□□□□ -2.33
FAM227B-213ENST00000561116 BPESC1Q9GZL8 116 aa0.47□□□□□ -2.33
FAM227B-213ENST00000561116 UNC13BO14795 1591 aa0.47□□□□□ -2.33
FAM227B-213ENST00000561116 TTC37Q6PGP7 1564 aa0.47□□□□□ -2.33
FAM227B-213ENST00000561116 AHNAKQ09666 5890 aaKnown RBP0.47□□□□□ -2.33
FAM227B-213ENST00000561116 TSC2P49815 1807 aa0.47□□□□□ -2.33
FAM227B-213ENST00000561116 GAPVD1Q14C86 1478 aa0.47□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms