RNA–Protein interactions for RNA: ENST00000560131.1

TPM1-222, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-222ENST00000560131 C20orf203Q8NBC4 194 aa3.79□□□□□ -1.8
TPM1-222ENST00000560131 CCL17Q92583 94 aa3.79□□□□□ -1.8
TPM1-222ENST00000560131 EEF1AKMT3Q96AZ1 226 aa3.79□□□□□ -1.8
TPM1-222ENST00000560131 PRORYQ9H606 182 aa3.79□□□□□ -1.8
TPM1-222ENST00000560131 PLCE1Q9P212 2302 aa3.79□□□□□ -1.8
TPM1-222ENST00000560131 ABCA1O95477 2261 aa3.79□□□□□ -1.8
TPM1-222ENST00000560131 ZGRF1Q86YA3 2104 aa3.79□□□□□ -1.8
TPM1-222ENST00000560131 CADP27708 2225 aa3.78□□□□□ -1.8
TPM1-222ENST00000560131 IGLV4-3A0A075B6K6 122 aa3.78□□□□□ -1.8
TPM1-222ENST00000560131 IGHV7-81A0A0B4J1V7 117 aa3.78□□□□□ -1.8
TPM1-222ENST00000560131 TINCRA0A1B0GVN0 87 aa3.78□□□□□ -1.8
TPM1-222ENST00000560131 K7ENP7 123 aa3.78□□□□□ -1.8
TPM1-222ENST00000560131 MGPP08493 103 aa3.78□□□□□ -1.8
TPM1-222ENST00000560131 IGHV3-30-3P0DP02 117 aa3.78□□□□□ -1.8
TPM1-222ENST00000560131 RPL18AQ02543 176 aaKnown RBP3.78□□□□□ -1.8
TPM1-222ENST00000560131 Q6JHZ5 121 aa3.78□□□□□ -1.8
TPM1-222ENST00000560131 Q6ZRP5 223 aa3.78□□□□□ -1.8
TPM1-222ENST00000560131 SERP2Q8N6R1 65 aa3.78□□□□□ -1.8
TPM1-222ENST00000560131 FDCSPQ8NFU4 85 aa3.78□□□□□ -1.8
TPM1-222ENST00000560131 VSIG2Q96IQ7 327 aa3.78□□□□□ -1.8
TPM1-222ENST00000560131 C9orf85Q96MD7 179 aa3.78□□□□□ -1.8
TPM1-222ENST00000560131 DUX3Q96PT4 197 aa3.78□□□□□ -1.8
TPM1-222ENST00000560131 LINC00527Q9UJ94 153 aa3.78□□□□□ -1.8
TPM1-222ENST00000560131 FAM223BA6NKX1 122 aa3.77□□□□□ -1.81
TPM1-222ENST00000560131 H7C2G1 150 aa3.77□□□□□ -1.81
TPM1-222ENST00000560131 M0QY20 66 aa3.77□□□□□ -1.81
TPM1-222ENST00000560131 NDUFA1O15239 70 aa3.77□□□□□ -1.81
TPM1-222ENST00000560131 BCE1O60756 84 aa3.77□□□□□ -1.81
TPM1-222ENST00000560131 COX7A1P24310 79 aa3.77□□□□□ -1.81
TPM1-222ENST00000560131 RPL39P62891 51 aaKnown RBP3.77□□□□□ -1.81
TPM1-222ENST00000560131 BSPH1Q075Z2 132 aa3.77□□□□□ -1.81
TPM1-222ENST00000560131 C15orf32Q32M92 178 aa3.77□□□□□ -1.81
TPM1-222ENST00000560131 CEMP1Q6PRD7 247 aaPredicted RBP3.77□□□□□ -1.81
TPM1-222ENST00000560131 FAM19A3Q7Z5A8 133 aa3.77□□□□□ -1.81
TPM1-222ENST00000560131 FAM223AQ8IWN6 122 aa3.77□□□□□ -1.81
TPM1-222ENST00000560131 Q8N9W7 124 aa3.77□□□□□ -1.81
TPM1-222ENST00000560131 SMCR5Q8TEV8 140 aa3.77□□□□□ -1.81
TPM1-222ENST00000560131 DPH3Q96FX2 82 aa3.77□□□□□ -1.81
TPM1-222ENST00000560131 UPK3BQ9BT76 320 aa3.77□□□□□ -1.81
TPM1-222ENST00000560131 NDUFA12Q9UI09 145 aa3.77□□□□□ -1.81
TPM1-222ENST00000560131 AHCTF1Q8WYP5 2266 aa3.77□□□□□ -1.81
TPM1-222ENST00000560131 IGHV3-38A0A0C4DH36 116 aa3.76□□□□□ -1.81
TPM1-222ENST00000560131 EPM2AB3EWF7 344 aa3.76□□□□□ -1.81
TPM1-222ENST00000560131 NDUFA4O00483 81 aa3.76□□□□□ -1.81
TPM1-222ENST00000560131 NDUFC2O95298 119 aa3.76□□□□□ -1.81
TPM1-222ENST00000560131 PRB4P10163 310 aaPredicted RBP3.76□□□□□ -1.81
TPM1-222ENST00000560131 VMO1Q7Z5L0 202 aa3.76□□□□□ -1.81
TPM1-222ENST00000560131 OBSCN-AS1Q96MR7 158 aa3.76□□□□□ -1.81
TPM1-222ENST00000560131 ESM1Q9NQ30 184 aa3.76□□□□□ -1.81
TPM1-222ENST00000560131 S4R3C0 116 aa3.76□□□□□ -1.81
TPM1-222ENST00000560131 SDK1Q7Z5N4 2213 aa3.76□□□□□ -1.81
TPM1-222ENST00000560131 DNAH14Q0VDD8 3507 aa3.76□□□□□ -1.81
TPM1-222ENST00000560131 MUC4Q99102 2169 aa3.76□□□□□ -1.81
TPM1-222ENST00000560131 IGHV3OR16-10A0A075B7F0 116 aa3.75□□□□□ -1.81
TPM1-222ENST00000560131 A0A0J9YXV3 536 aa3.75□□□□□ -1.81
TPM1-222ENST00000560131 LOC107984640A0A0U1RRK4 108 aa3.75□□□□□ -1.81
TPM1-222ENST00000560131 H3BUA1 57 aa3.75□□□□□ -1.81
TPM1-222ENST00000560131 PSMB8P28062 276 aa3.75□□□□□ -1.81
TPM1-222ENST00000560131 UCNP55089 124 aa3.75□□□□□ -1.81
TPM1-222ENST00000560131 CIRBPQ14011 172 aaKnown RBP3.75□□□□□ -1.81
TPM1-222ENST00000560131 ADAMTSL4-AS1Q5T5F5 129 aa3.75□□□□□ -1.81
TPM1-222ENST00000560131 ATP5EP2Q5VTU8 51 aa3.75□□□□□ -1.81
TPM1-222ENST00000560131 KIR2DL5BQ8NHK3 375 aa3.75□□□□□ -1.81
TPM1-222ENST00000560131 CLEC2BQ92478 149 aa3.75□□□□□ -1.81
TPM1-222ENST00000560131 FAM104AQ969W3 186 aa3.75□□□□□ -1.81
TPM1-222ENST00000560131 C22orf24Q9Y442 160 aa3.75□□□□□ -1.81
TPM1-222ENST00000560131 TRAV8-3A0A0A6YYJ7 113 aa3.74□□□□□ -1.81
TPM1-222ENST00000560131 IGHV3-16A0A0C4DH30 117 aa3.74□□□□□ -1.81
TPM1-222ENST00000560131 TRBV10-3A0A0K0K1G6 114 aa3.74□□□□□ -1.81
TPM1-222ENST00000560131 E7EQL1 145 aa3.74□□□□□ -1.81
TPM1-222ENST00000560131 GNRH2O43555 120 aa3.74□□□□□ -1.81
TPM1-222ENST00000560131 IGHV3-23P01764 117 aa3.74□□□□□ -1.81
TPM1-222ENST00000560131 BAALC-AS2P0C853 105 aa3.74□□□□□ -1.81
TPM1-222ENST00000560131 PRRC2AP48634 2157 aaKnown RBP3.74□□□□□ -1.81
TPM1-222ENST00000560131 SEC61GP60059 68 aa3.74□□□□□ -1.81
TPM1-222ENST00000560131 RPL36AP83881 106 aaKnown RBP3.74□□□□□ -1.81
TPM1-222ENST00000560131 DAZ2Q13117 558 aaKnown RBP3.74□□□□□ -1.81
TPM1-222ENST00000560131 S100A7L2Q5SY68 101 aa3.74□□□□□ -1.81
TPM1-222ENST00000560131 LINC00242Q5T6M2 205 aa3.74□□□□□ -1.81
TPM1-222ENST00000560131 DAZ4Q86SG3 579 aaKnown RBP3.74□□□□□ -1.81
TPM1-222ENST00000560131 DAZ1Q9NQZ3 744 aaKnown RBP3.74□□□□□ -1.81
TPM1-222ENST00000560131 DAZ3Q9NR90 486 aaKnown RBP3.74□□□□□ -1.81
TPM1-222ENST00000560131 C5orf42Q9H799 3197 aa3.74□□□□□ -1.81
TPM1-222ENST00000560131 UNC80Q8N2C7 3258 aa3.74□□□□□ -1.81
TPM1-222ENST00000560131 ARHGAP32A7KAX9 2087 aa3.74□□□□□ -1.81
TPM1-222ENST00000560131 hADV29S1A0JD25 119 aa3.73□□□□□ -1.81
TPM1-222ENST00000560131 F5H768 121 aa3.73□□□□□ -1.81
TPM1-222ENST00000560131 K7EMT4 169 aa3.73□□□□□ -1.81
TPM1-222ENST00000560131 RPL28P46779 137 aaKnown RBP3.73□□□□□ -1.81
TPM1-222ENST00000560131 Q5XG85 94 aa3.73□□□□□ -1.81
TPM1-222ENST00000560131 CLEC19AQ6UXS0 136 aa3.73□□□□□ -1.81
TPM1-222ENST00000560131 LINC00308Q8TCZ7 52 aa3.73□□□□□ -1.81
TPM1-222ENST00000560131 USMG5Q96IX5 58 aa3.73□□□□□ -1.81
TPM1-222ENST00000560131 CUL9Q8IWT3 2517 aa3.73□□□□□ -1.81
TPM1-222ENST00000560131 TRAV13-2A0A0B4J235 113 aa3.72□□□□□ -1.81
TPM1-222ENST00000560131 H0YGX0 51 aa3.72□□□□□ -1.81
TPM1-222ENST00000560131 K7EQG2 157 aa3.72□□□□□ -1.81
TPM1-222ENST00000560131 CD28P10747 220 aa3.72□□□□□ -1.81
TPM1-222ENST00000560131 LYPD5Q6UWN5 251 aa3.72□□□□□ -1.81
TPM1-222ENST00000560131 C3orf56Q8N813 242 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms