RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 PIEZO1Q92508 2521 aa12.08□□□□□ -0.48
SPG11-215ENST00000559193 USP9YO00507 2555 aaPredicted RBP12.08□□□□□ -0.48
SPG11-215ENST00000559193 TRAV8-3A0A0A6YYJ7 113 aa12.08□□□□□ -0.48
SPG11-215ENST00000559193 LITAFQ99732 161 aa12.08□□□□□ -0.48
SPG11-215ENST00000559193 IGSF10Q6WRI0 2623 aa12.08□□□□□ -0.48
SPG11-215ENST00000559193 CRYBA4P53673 196 aa12.07□□□□□ -0.48
SPG11-215ENST00000559193 TMEM61Q8N0U2 210 aa12.07□□□□□ -0.48
SPG11-215ENST00000559193 CHCHD7Q9BUK0 85 aa12.07□□□□□ -0.48
SPG11-215ENST00000559193 ZNF415Q09FC8 603 aa12.07□□□□□ -0.48
SPG11-215ENST00000559193 ERG28Q9UKR5 140 aa12.07□□□□□ -0.48
SPG11-215ENST00000559193 H7C2G1 150 aa12.06□□□□□ -0.48
SPG11-215ENST00000559193 ANKRD29Q8N6D5 301 aa12.06□□□□□ -0.48
SPG11-215ENST00000559193 CREBBPQ92793 2442 aa12.06□□□□□ -0.48
SPG11-215ENST00000559193 FBN2P35556 2912 aa12.06□□□□□ -0.48
SPG11-215ENST00000559193 NACAE9PAV3 2078 aa12.06□□□□□ -0.48
SPG11-215ENST00000559193 IGHV4-31P0DP07 118 aa12.06□□□□□ -0.48
SPG11-215ENST00000559193 UBE2D4Q9Y2X8 147 aa12.05□□□□□ -0.48
SPG11-215ENST00000559193 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.05□□□□□ -0.48
SPG11-215ENST00000559193 PIK3CD-AS1Q5SR53 167 aa12.05□□□□□ -0.48
SPG11-215ENST00000559193 ANKRD17O75179 2603 aaKnown RBP12.04□□□□□ -0.48
SPG11-215ENST00000559193 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.04□□□□□ -0.48
SPG11-215ENST00000559193 IGHV1-58A0A0C4DH39 117 aa12.04□□□□□ -0.48
SPG11-215ENST00000559193 IGKV2-29A2NJV5 120 aaPredicted RBP12.04□□□□□ -0.48
SPG11-215ENST00000559193 C11orf72Q8NBR9 251 aa12.04□□□□□ -0.48
SPG11-215ENST00000559193 MAP6D1Q9H9H5 199 aa12.04□□□□□ -0.48
SPG11-215ENST00000559193 SPANXA1Q9NS26 97 aa12.04□□□□□ -0.48
SPG11-215ENST00000559193 POLQO75417 2590 aa12.03□□□□□ -0.48
SPG11-215ENST00000559193 TINCRA0A1B0GVN0 87 aa12.03□□□□□ -0.48
SPG11-215ENST00000559193 SLC25A20O43772 301 aa12.03□□□□□ -0.48
SPG11-215ENST00000559193 Q6ZUT4 128 aa12.03□□□□□ -0.48
SPG11-215ENST00000559193 C9JAW5 83 aa12.03□□□□□ -0.48
SPG11-215ENST00000559193 Q8N2B8 174 aa12.03□□□□□ -0.48
SPG11-215ENST00000559193 LINC00467Q9BRT7 94 aa12.03□□□□□ -0.48
SPG11-215ENST00000559193 NDUFA12Q9UI09 145 aa12.03□□□□□ -0.48
SPG11-215ENST00000559193 A8MZ25 164 aa12.02□□□□□ -0.48
SPG11-215ENST00000559193 ADAMTSL4-AS1Q5T5F5 129 aa12.02□□□□□ -0.48
SPG11-215ENST00000559193 VSIG2Q96IQ7 327 aa12.02□□□□□ -0.48
SPG11-215ENST00000559193 IGHV3-38A0A0C4DH36 116 aa12.02□□□□□ -0.49
SPG11-215ENST00000559193 Q1RN00 199 aa12.02□□□□□ -0.49
SPG11-215ENST00000559193 LINC01587Q99440 93 aa12.02□□□□□ -0.49
SPG11-215ENST00000559193 PEMTQ9UBM1 199 aa12.02□□□□□ -0.49
SPG11-215ENST00000559193 CACNA1AO00555 2505 aa12.02□□□□□ -0.49
SPG11-215ENST00000559193 MXRA5Q9NR99 2828 aa12.01□□□□□ -0.49
SPG11-215ENST00000559193 MT-ATP8P03928 68 aa12.01□□□□□ -0.49
SPG11-215ENST00000559193 SPINK8P0C7L1 97 aa12.01□□□□□ -0.49
SPG11-215ENST00000559193 XGP55808 180 aa12.01□□□□□ -0.49
SPG11-215ENST00000559193 MYO18BQ8IUG5 2567 aa12.01□□□□□ -0.49
SPG11-215ENST00000559193 IGHV3-53P01767 116 aa12.01□□□□□ -0.49
SPG11-215ENST00000559193 HIST2H2BDQ6DRA6 164 aa12.01□□□□□ -0.49
SPG11-215ENST00000559193 C4orf3Q8WVX3 66 aa12.01□□□□□ -0.49
SPG11-215ENST00000559193 SPANXDQ9BXN6 97 aa12.01□□□□□ -0.49
SPG11-215ENST00000559193 SPANXCQ9NY87 97 aa12.01□□□□□ -0.49
SPG11-215ENST00000559193 M0QXV9 152 aa12□□□□□ -0.49
SPG11-215ENST00000559193 BEAN1Q3B7T3 259 aa12□□□□□ -0.49
SPG11-215ENST00000559193 CR1P17927 2039 aa11.99□□□□□ -0.49
SPG11-215ENST00000559193 PRSS2P07478 247 aa11.99□□□□□ -0.49
SPG11-215ENST00000559193 KHDC1LQ5JSQ8 128 aa11.99□□□□□ -0.49
SPG11-215ENST00000559193 DYNLRB2Q8TF09 96 aa11.99□□□□□ -0.49
SPG11-215ENST00000559193 TRIAP1O43715 76 aa11.99□□□□□ -0.49
SPG11-215ENST00000559193 DNAJC30Q96LL9 226 aa11.99□□□□□ -0.49
SPG11-215ENST00000559193 TRBV30A0A0K0K1B3 111 aa11.98□□□□□ -0.49
SPG11-215ENST00000559193 RS1O15537 224 aa11.98□□□□□ -0.49
SPG11-215ENST00000559193 INSP01308 110 aa11.98□□□□□ -0.49
SPG11-215ENST00000559193 MIAQ16674 131 aa11.98□□□□□ -0.49
SPG11-215ENST00000559193 DEFB114Q30KQ6 69 aa11.98□□□□□ -0.49
SPG11-215ENST00000559193 PRRC2AP48634 2157 aaKnown RBP11.98□□□□□ -0.49
SPG11-215ENST00000559193 A0A1B0GV72 72 aa11.98□□□□□ -0.49
SPG11-215ENST00000559193 ATXN8Q156A1 80 aa11.98□□□□□ -0.49
SPG11-215ENST00000559193 LINC01620Q4KN68 170 aa11.97□□□□□ -0.49
SPG11-215ENST00000559193 ZFAND6Q6FIF0 208 aa11.97□□□□□ -0.49
SPG11-215ENST00000559193 ACACBO00763 2458 aa11.97□□□□□ -0.49
SPG11-215ENST00000559193 KRTAP10-9P60411 292 aa11.97□□□□□ -0.49
SPG11-215ENST00000559193 NPC2P61916 151 aa11.96□□□□□ -0.49
SPG11-215ENST00000559193 GEMIN7Q9H840 131 aaKnown RBP11.96□□□□□ -0.49
SPG11-215ENST00000559193 CDKN2A-AS1Q9UH64 79 aa11.96□□□□□ -0.5
SPG11-215ENST00000559193 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.95□□□□□ -0.5
SPG11-215ENST00000559193 PRB1P04280 392 aa11.95□□□□□ -0.5
SPG11-215ENST00000559193 CKS1BP61024 79 aa11.95□□□□□ -0.5
SPG11-215ENST00000559193 Q6ZSV7 163 aa11.95□□□□□ -0.5
SPG11-215ENST00000559193 XCL2Q9UBD3 114 aa11.94□□□□□ -0.5
SPG11-215ENST00000559193 ICOSQ9Y6W8 199 aa11.94□□□□□ -0.5
SPG11-215ENST00000559193 IGLV5-45A0A087WSX0 123 aa11.94□□□□□ -0.5
SPG11-215ENST00000559193 ODF3L2Q3SX64 289 aa11.94□□□□□ -0.5
SPG11-215ENST00000559193 CLUHP3Q96NS8 147 aa11.94□□□□□ -0.5
SPG11-215ENST00000559193 NTN5Q8WTR8 489 aaPredicted RBP11.93□□□□□ -0.5
SPG11-215ENST00000559193 LINC01600Q96MT4 127 aa11.93□□□□□ -0.5
SPG11-215ENST00000559193 TIRAPP58753 221 aa11.93□□□□□ -0.5
SPG11-215ENST00000559193 FAM208BQ5VWN6 2430 aa11.93□□□□□ -0.5
SPG11-215ENST00000559193 TIMM17BO60830 172 aa11.92□□□□□ -0.5
SPG11-215ENST00000559193 TMEM101Q96IK0 257 aa11.92□□□□□ -0.5
SPG11-215ENST00000559193 IGHV3OR16-12A0A075B7B8 117 aa11.92□□□□□ -0.5
SPG11-215ENST00000559193 TRBV10-2A0A0K0K1G8 114 aa11.92□□□□□ -0.5
SPG11-215ENST00000559193 COX6A2Q02221 97 aa11.92□□□□□ -0.5
SPG11-215ENST00000559193 C1orf158Q8N1D5 194 aa11.92□□□□□ -0.5
SPG11-215ENST00000559193 IL17DQ8TAD2 202 aa11.92□□□□□ -0.5
SPG11-215ENST00000559193 TMEM262E9PQX1 116 aa11.91□□□□□ -0.5
SPG11-215ENST00000559193 NDUFA1O15239 70 aa11.91□□□□□ -0.5
SPG11-215ENST00000559193 DAND5Q8N907 189 aa11.91□□□□□ -0.5
SPG11-215ENST00000559193 RNF183Q96D59 192 aa11.91□□□□□ -0.5
SPG11-215ENST00000559193 DEFB113Q30KQ7 82 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 146.9 ms