RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 C7orf77A4D0Y5 90 aa10.19□□□□□ -0.78
CSHL1-208ENST00000558609 MT-ND4LP03901 98 aa10.19□□□□□ -0.78
CSHL1-208ENST00000558609 ANGP03950 147 aaKnown RBP10.19□□□□□ -0.78
CSHL1-208ENST00000558609 IQCJQ1A5X6 159 aa10.19□□□□□ -0.78
CSHL1-208ENST00000558609 FRZBQ92765 325 aa10.19□□□□□ -0.78
CSHL1-208ENST00000558609 FAM30AQ9NZY2 134 aa10.19□□□□□ -0.78
CSHL1-208ENST00000558609 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.18□□□□□ -0.78
CSHL1-208ENST00000558609 IGHV1-24A0A0C4DH33 117 aa10.18□□□□□ -0.78
CSHL1-208ENST00000558609 SCO1O75880 301 aa10.18□□□□□ -0.78
CSHL1-208ENST00000558609 CRPP02741 224 aa10.18□□□□□ -0.78
CSHL1-208ENST00000558609 C1orf43Q9BWL3 253 aa10.18□□□□□ -0.78
CSHL1-208ENST00000558609 NIT2Q9NQR4 276 aa10.18□□□□□ -0.78
CSHL1-208ENST00000558609 RBX1P62877 108 aa10.17□□□□□ -0.78
CSHL1-208ENST00000558609 GAGE6Q13070 117 aa10.17□□□□□ -0.78
CSHL1-208ENST00000558609 TWIST1Q15672 202 aa10.17□□□□□ -0.78
CSHL1-208ENST00000558609 Q5VSD8 79 aa10.17□□□□□ -0.78
CSHL1-208ENST00000558609 FAM231DQ6ZW35 169 aa10.17□□□□□ -0.78
CSHL1-208ENST00000558609 LINC01551Q86U37 167 aa10.17□□□□□ -0.78
CSHL1-208ENST00000558609 GTSF1Q8WW33 167 aa10.17□□□□□ -0.78
CSHL1-208ENST00000558609 PRR34Q9NV39 138 aa10.17□□□□□ -0.78
CSHL1-208ENST00000558609 PPP1R2P9O14990 202 aa10.16□□□□□ -0.78
CSHL1-208ENST00000558609 SMR3BP02814 79 aaPredicted RBP10.16□□□□□ -0.78
CSHL1-208ENST00000558609 HAMPP81172 84 aa10.16□□□□□ -0.78
CSHL1-208ENST00000558609 MIAQ16674 131 aa10.16□□□□□ -0.78
CSHL1-208ENST00000558609 Q6ZSA8 131 aa10.16□□□□□ -0.78
CSHL1-208ENST00000558609 ANAPC16Q96DE5 110 aa10.16□□□□□ -0.78
CSHL1-208ENST00000558609 PGLYRP4Q96LB8 373 aa10.16□□□□□ -0.78
CSHL1-208ENST00000558609 CTDSP1Q9GZU7 261 aa10.16□□□□□ -0.78
CSHL1-208ENST00000558609 GATCO43716 136 aaKnown RBP10.15□□□□□ -0.78
CSHL1-208ENST00000558609 ISOC2Q96AB3 205 aa10.15□□□□□ -0.78
CSHL1-208ENST00000558609 SMCO4Q9NRQ5 59 aa10.15□□□□□ -0.78
CSHL1-208ENST00000558609 DNAH8Q96JB1 4490 aa10.14□□□□□ -0.79
CSHL1-208ENST00000558609 A8MWL6 223 aa10.14□□□□□ -0.79
CSHL1-208ENST00000558609 C14orf177Q52M58 125 aa10.14□□□□□ -0.79
CSHL1-208ENST00000558609 LINC00269Q8N2A0 174 aa10.14□□□□□ -0.79
CSHL1-208ENST00000558609 TMEM243Q9BU79 118 aa10.14□□□□□ -0.79
CSHL1-208ENST00000558609 SRRM2Q9UQ35 2752 aaKnown RBP10.13□□□□□ -0.79
CSHL1-208ENST00000558609 VPS13BQ7Z7G8 4022 aa10.13□□□□□ -0.79
CSHL1-208ENST00000558609 A0A1B0GUV1 79 aa10.13□□□□□ -0.79
CSHL1-208ENST00000558609 FAM229AH3BQW9 127 aa10.13□□□□□ -0.79
CSHL1-208ENST00000558609 INAFM2P0DMQ5 153 aa10.13□□□□□ -0.79
CSHL1-208ENST00000558609 S100PP25815 95 aa10.13□□□□□ -0.79
CSHL1-208ENST00000558609 FOXA3P55318 350 aaPredicted RBP10.13□□□□□ -0.79
CSHL1-208ENST00000558609 CT83Q5H943 113 aa10.13□□□□□ -0.79
CSHL1-208ENST00000558609 GATD1Q8NB37 220 aa10.13□□□□□ -0.79
CSHL1-208ENST00000558609 KRTAP26-1Q6PEX3 210 aa10.12□□□□□ -0.79
CSHL1-208ENST00000558609 SMIM15Q7Z3B0 74 aa10.12□□□□□ -0.79
CSHL1-208ENST00000558609 TRAV26-2A0A0B4J265 109 aa10.11□□□□□ -0.79
CSHL1-208ENST00000558609 COTL1Q14019 142 aa10.11□□□□□ -0.79
CSHL1-208ENST00000558609 LINC01620Q4KN68 170 aa10.11□□□□□ -0.79
CSHL1-208ENST00000558609 CLPSL2Q6UWE3 100 aa10.11□□□□□ -0.79
CSHL1-208ENST00000558609 C20orf203Q8NBC4 194 aa10.11□□□□□ -0.79
CSHL1-208ENST00000558609 OSTCQ9NRP0 149 aa10.11□□□□□ -0.79
CSHL1-208ENST00000558609 TMEM242Q9NWH2 141 aa10.11□□□□□ -0.79
CSHL1-208ENST00000558609 USP17L23D6RBM5 183 aa10.1□□□□□ -0.79
CSHL1-208ENST00000558609 HLA-DQA1P01909 254 aa10.1□□□□□ -0.79
CSHL1-208ENST00000558609 REG3AQ06141 175 aa10.1□□□□□ -0.79
CSHL1-208ENST00000558609 CBLN2Q8IUK8 224 aa10.1□□□□□ -0.79
CSHL1-208ENST00000558609 IGLV4-60A0A075B6I1 120 aa10.09□□□□□ -0.79
CSHL1-208ENST00000558609 AMTP48728 403 aa10.09□□□□□ -0.79
CSHL1-208ENST00000558609 DEFB104AQ8WTQ1 72 aa10.09□□□□□ -0.79
CSHL1-208ENST00000558609 TSKUQ8WUA8 353 aa10.09□□□□□ -0.79
CSHL1-208ENST00000558609 GFRA4Q9GZZ7 299 aa10.09□□□□□ -0.79
CSHL1-208ENST00000558609 TRAV8-4A0A0B4J246 113 aa10.08□□□□□ -0.8
CSHL1-208ENST00000558609 FAM231BA6NCW3 169 aa10.08□□□□□ -0.8
CSHL1-208ENST00000558609 UBE2L6O14933 153 aa10.08□□□□□ -0.8
CSHL1-208ENST00000558609 RPL39LQ96EH5 51 aaKnown RBP10.08□□□□□ -0.8
CSHL1-208ENST00000558609 HIGD1CA8MV81 97 aa10.07□□□□□ -0.8
CSHL1-208ENST00000558609 NCR2O95944 276 aa10.07□□□□□ -0.8
CSHL1-208ENST00000558609 PRSS1P07477 247 aa10.07□□□□□ -0.8
CSHL1-208ENST00000558609 DGAT2L7PQ6IED9 249 aa10.07□□□□□ -0.8
CSHL1-208ENST00000558609 BORCS7Q96B45 105 aa10.07□□□□□ -0.8
CSHL1-208ENST00000558609 FLG2Q5D862 2391 aaPredicted RBP10.06□□□□□ -0.8
CSHL1-208ENST00000558609 A0A1B0GUT8 65 aa10.06□□□□□ -0.8
CSHL1-208ENST00000558609 SCXQ7RTU7 201 aa10.06□□□□□ -0.8
CSHL1-208ENST00000558609 IMMP2LQ96T52 175 aa10.06□□□□□ -0.8
CSHL1-208ENST00000558609 CHAC1Q9BUX1 264 aa10.06□□□□□ -0.8
CSHL1-208ENST00000558609 IGLV10-54A0A075B6I4 117 aa10.05□□□□□ -0.8
CSHL1-208ENST00000558609 TRBV6-5A0A0K0K1A5 114 aa10.05□□□□□ -0.8
CSHL1-208ENST00000558609 SDHAF1A6NFY7 115 aa10.05□□□□□ -0.8
CSHL1-208ENST00000558609 BTF3L4Q96K17 158 aa10.05□□□□□ -0.8
CSHL1-208ENST00000558609 TMEM191AQ9H0A3 160 aa10.05□□□□□ -0.8
CSHL1-208ENST00000558609 V9GYV3 84 aa10.05□□□□□ -0.8
CSHL1-208ENST00000558609 H7C423 109 aa10.04□□□□□ -0.8
CSHL1-208ENST00000558609 LINC00528Q8N1L1 170 aa10.04□□□□□ -0.8
CSHL1-208ENST00000558609 UBR4Q5T4S7 5183 aa10.04□□□□□ -0.8
CSHL1-208ENST00000558609 PLA2G1BP04054 148 aaKnown RBP10.03□□□□□ -0.8
CSHL1-208ENST00000558609 C9orf163Q8N9P6 203 aa10.03□□□□□ -0.8
CSHL1-208ENST00000558609 CIRBP-AS1Q8TBR5 109 aa10.03□□□□□ -0.8
CSHL1-208ENST00000558609 TGIF2-C20orf24A0A0A6YYL0 155 aa10.02□□□□□ -0.81
CSHL1-208ENST00000558609 I3L3M4 83 aa10.02□□□□□ -0.81
CSHL1-208ENST00000558609 GAS8-AS1O95177 125 aa10.02□□□□□ -0.81
CSHL1-208ENST00000558609 APCSP02743 223 aa10.02□□□□□ -0.81
CSHL1-208ENST00000558609 RAB4AP20338 218 aa10.02□□□□□ -0.81
CSHL1-208ENST00000558609 PMCHP20382 165 aa10.02□□□□□ -0.81
CSHL1-208ENST00000558609 RNF185Q96GF1 192 aa10.02□□□□□ -0.81
CSHL1-208ENST00000558609 NAT8BQ9UHF3 227 aa10.02□□□□□ -0.81
CSHL1-208ENST00000558609 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.01□□□□□ -0.81
CSHL1-208ENST00000558609 IGKV2-29A2NJV5 120 aaPredicted RBP10.01□□□□□ -0.81
CSHL1-208ENST00000558609 COLCA2A8K830 154 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms