RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 KRTAP10-3P60369 221 aa2.31□□□□□ -2.04
HERC1-203ENST00000558532 CCL8P80075 99 aa2.31□□□□□ -2.04
HERC1-203ENST00000558532 MRPS36P82909 103 aaKnown RBP2.31□□□□□ -2.04
HERC1-203ENST00000558532 RPL18AQ02543 176 aaKnown RBP2.31□□□□□ -2.04
HERC1-203ENST00000558532 PRR9Q5T870 116 aa2.31□□□□□ -2.04
HERC1-203ENST00000558532 SERP2Q8N6R1 65 aa2.31□□□□□ -2.04
HERC1-203ENST00000558532 PRSS33Q8NF86 280 aa2.31□□□□□ -2.04
HERC1-203ENST00000558532 LINC00477Q96M19 166 aa2.31□□□□□ -2.04
HERC1-203ENST00000558532 OBSCN-AS1Q96MR7 158 aa2.31□□□□□ -2.04
HERC1-203ENST00000558532 DEFB127Q9H1M4 99 aa2.31□□□□□ -2.04
HERC1-203ENST00000558532 Q9H8V8 135 aa2.31□□□□□ -2.04
HERC1-203ENST00000558532 KLK5Q9Y337 293 aaPredicted RBP2.31□□□□□ -2.04
HERC1-203ENST00000558532 SZT2Q5T011 3432 aa2.31□□□□□ -2.04
HERC1-203ENST00000558532 ARFGEF3Q5TH69 2177 aa2.3□□□□□ -2.04
HERC1-203ENST00000558532 KIAA0100Q14667 2235 aaKnown RBP2.3□□□□□ -2.04
HERC1-203ENST00000558532 IGLV4-3A0A075B6K6 122 aa2.3□□□□□ -2.04
HERC1-203ENST00000558532 IGHV3-72A0A0B4J1Y9 119 aa2.3□□□□□ -2.04
HERC1-203ENST00000558532 IGHV1-58A0A0C4DH39 117 aa2.3□□□□□ -2.04
HERC1-203ENST00000558532 ODF3BA8MYP8 253 aa2.3□□□□□ -2.04
HERC1-203ENST00000558532 I3L3M4 83 aa2.3□□□□□ -2.04
HERC1-203ENST00000558532 CDK2AP2O75956 126 aa2.3□□□□□ -2.04
HERC1-203ENST00000558532 APELAP0DMC3 54 aa2.3□□□□□ -2.04
HERC1-203ENST00000558532 DLX1P56177 255 aa2.3□□□□□ -2.04
HERC1-203ENST00000558532 NDPQ00604 133 aa2.3□□□□□ -2.04
HERC1-203ENST00000558532 Q1RN00 199 aa2.3□□□□□ -2.04
HERC1-203ENST00000558532 LYPD2Q6UXB3 125 aa2.3□□□□□ -2.04
HERC1-203ENST00000558532 FAM19A3Q7Z5A8 133 aa2.3□□□□□ -2.04
HERC1-203ENST00000558532 C3orf56Q8N813 242 aa2.3□□□□□ -2.04
HERC1-203ENST00000558532 CNEP1R1Q8N9A8 125 aa2.3□□□□□ -2.04
HERC1-203ENST00000558532 C20orf203Q8NBC4 194 aa2.3□□□□□ -2.04
HERC1-203ENST00000558532 DEFB108BQ8NET1 73 aa2.3□□□□□ -2.04
HERC1-203ENST00000558532 FAM104AQ969W3 186 aa2.3□□□□□ -2.04
HERC1-203ENST00000558532 CYSTM1Q9H1C7 97 aa2.3□□□□□ -2.04
HERC1-203ENST00000558532 PRORYQ9H606 182 aa2.3□□□□□ -2.04
HERC1-203ENST00000558532 ZNF256Q9Y2P7 627 aaPredicted RBP2.3□□□□□ -2.04
HERC1-203ENST00000558532 MED13Q9UHV7 2174 aa2.3□□□□□ -2.04
HERC1-203ENST00000558532 C5orf42Q9H799 3197 aa2.29□□□□□ -2.04
HERC1-203ENST00000558532 A0A1W2PNU3 283 aaPredicted RBP2.29□□□□□ -2.04
HERC1-203ENST00000558532 hADV29S1A0JD25 119 aa2.29□□□□□ -2.04
HERC1-203ENST00000558532 KLLNB2CW77 178 aa2.29□□□□□ -2.04
HERC1-203ENST00000558532 M0R1B8 84 aa2.29□□□□□ -2.04
HERC1-203ENST00000558532 CDX4O14627 284 aaPredicted RBP2.29□□□□□ -2.04
HERC1-203ENST00000558532 ENSAO43768 121 aaKnown RBP2.29□□□□□ -2.04
HERC1-203ENST00000558532 BCE1O60756 84 aa2.29□□□□□ -2.04
HERC1-203ENST00000558532 NDUFC2O95298 119 aa2.29□□□□□ -2.04
HERC1-203ENST00000558532 IGHV3-30-3P0DP02 117 aa2.29□□□□□ -2.04
HERC1-203ENST00000558532 PRB4P10163 310 aaPredicted RBP2.29□□□□□ -2.04
HERC1-203ENST00000558532 RPL39P62891 51 aaKnown RBP2.29□□□□□ -2.04
HERC1-203ENST00000558532 DAZ2Q13117 558 aaKnown RBP2.29□□□□□ -2.04
HERC1-203ENST00000558532 VMO1Q7Z5L0 202 aa2.29□□□□□ -2.04
HERC1-203ENST00000558532 DAZ4Q86SG3 579 aaKnown RBP2.29□□□□□ -2.04
HERC1-203ENST00000558532 LY6G5BQ8NDX9 201 aa2.29□□□□□ -2.04
HERC1-203ENST00000558532 CLEC2BQ92478 149 aa2.29□□□□□ -2.04
HERC1-203ENST00000558532 VSIG2Q96IQ7 327 aa2.29□□□□□ -2.04
HERC1-203ENST00000558532 C9orf85Q96MD7 179 aa2.29□□□□□ -2.04
HERC1-203ENST00000558532 DAZ1Q9NQZ3 744 aaKnown RBP2.29□□□□□ -2.04
HERC1-203ENST00000558532 DAZ3Q9NR90 486 aaKnown RBP2.29□□□□□ -2.04
HERC1-203ENST00000558532 PRO0628Q9UI54 55 aa2.29□□□□□ -2.04
HERC1-203ENST00000558532 PHLDA3Q9Y5J5 127 aa2.29□□□□□ -2.04
HERC1-203ENST00000558532 XIRP2A4UGR9 3374 aa2.29□□□□□ -2.04
HERC1-203ENST00000558532 FAM186AA6NE01 2351 aa2.29□□□□□ -2.04
HERC1-203ENST00000558532 PLCE1Q9P212 2302 aa2.29□□□□□ -2.04
HERC1-203ENST00000558532 MUC4Q99102 2169 aa2.29□□□□□ -2.04
HERC1-203ENST00000558532 MKI67P46013 3256 aaKnown RBP2.28□□□□□ -2.04
HERC1-203ENST00000558532 ABCA1O95477 2261 aa2.28□□□□□ -2.04
HERC1-203ENST00000558532 A0A0J9YXV3 536 aa2.28□□□□□ -2.04
HERC1-203ENST00000558532 TRBV10-3A0A0K0K1G6 114 aa2.28□□□□□ -2.04
HERC1-203ENST00000558532 TINCRA0A1B0GVN0 87 aa2.28□□□□□ -2.04
HERC1-203ENST00000558532 H7C2G1 150 aa2.28□□□□□ -2.04
HERC1-203ENST00000558532 M0QY20 66 aa2.28□□□□□ -2.04
HERC1-203ENST00000558532 NDUFA1O15239 70 aa2.28□□□□□ -2.04
HERC1-203ENST00000558532 ATP5EP2Q5VTU8 51 aa2.28□□□□□ -2.04
HERC1-203ENST00000558532 LYPD5Q6UWN5 251 aa2.28□□□□□ -2.04
HERC1-203ENST00000558532 RNF182Q8N6D2 247 aa2.28□□□□□ -2.04
HERC1-203ENST00000558532 TMEM105Q8N8V8 129 aa2.28□□□□□ -2.04
HERC1-203ENST00000558532 COPS9Q8WXC6 57 aa2.28□□□□□ -2.04
HERC1-203ENST00000558532 OVOL2Q9BRP0 275 aa2.28□□□□□ -2.04
HERC1-203ENST00000558532 JPT2Q9H910 190 aa2.28□□□□□ -2.04
HERC1-203ENST00000558532 DPM3Q9P2X0 92 aa2.28□□□□□ -2.04
HERC1-203ENST00000558532 NDUFA12Q9UI09 145 aa2.28□□□□□ -2.04
HERC1-203ENST00000558532 UBE2D4Q9Y2X8 147 aa2.28□□□□□ -2.04
HERC1-203ENST00000558532 FAM215AQ9Y5M1 114 aa2.28□□□□□ -2.04
HERC1-203ENST00000558532 RANBP2P49792 3224 aaKnown RBP2.28□□□□□ -2.04
HERC1-203ENST00000558532 CADP27708 2225 aa2.27□□□□□ -2.05
HERC1-203ENST00000558532 PRRC2AP48634 2157 aaKnown RBP2.27□□□□□ -2.05
HERC1-203ENST00000558532 TRAV12-2A0A075B6T6 113 aa2.27□□□□□ -2.05
HERC1-203ENST00000558532 TRAV8-3A0A0A6YYJ7 113 aa2.27□□□□□ -2.05
HERC1-203ENST00000558532 IGHV7-81A0A0B4J1V7 117 aa2.27□□□□□ -2.05
HERC1-203ENST00000558532 TRAV13-1A0A0B4J241 112 aa2.27□□□□□ -2.05
HERC1-203ENST00000558532 M0R1W7 72 aa2.27□□□□□ -2.05
HERC1-203ENST00000558532 MGPP08493 103 aa2.27□□□□□ -2.05
HERC1-203ENST00000558532 PFN2P35080 140 aa2.27□□□□□ -2.05
HERC1-203ENST00000558532 RPL28P46779 137 aaKnown RBP2.27□□□□□ -2.05
HERC1-203ENST00000558532 KLKP1Q107X0 134 aa2.27□□□□□ -2.05
HERC1-203ENST00000558532 C4orf26Q17RF5 130 aa2.27□□□□□ -2.05
HERC1-203ENST00000558532 MINOS1Q5TGZ0 78 aa2.27□□□□□ -2.05
HERC1-203ENST00000558532 HRCT1Q6UXD1 115 aa2.27□□□□□ -2.05
HERC1-203ENST00000558532 LINC01561Q8N1V8 128 aa2.27□□□□□ -2.05
HERC1-203ENST00000558532 Q8N2B8 174 aa2.27□□□□□ -2.05
HERC1-203ENST00000558532 C11orf45Q8TAV5 145 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 126.4 ms