RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 DEFB113Q30KQ7 82 aa11.5□□□□□ -0.57
AP4E1-202ENST00000558439 MORN3Q6PF18 240 aaPredicted RBP11.5□□□□□ -0.57
AP4E1-202ENST00000558439 C10orf126Q8N4M7 172 aa11.5□□□□□ -0.57
AP4E1-202ENST00000558439 DNAL4O96015 105 aa11.5□□□□□ -0.57
AP4E1-202ENST00000558439 PPDPFLQ8WWR9 84 aa11.5□□□□□ -0.57
AP4E1-202ENST00000558439 COPS9Q8WXC6 57 aa11.49□□□□□ -0.57
AP4E1-202ENST00000558439 CKS1BP61024 79 aa11.49□□□□□ -0.57
AP4E1-202ENST00000558439 CCL24O00175 119 aa11.49□□□□□ -0.57
AP4E1-202ENST00000558439 TSPAN13O95857 204 aa11.49□□□□□ -0.57
AP4E1-202ENST00000558439 POLR2KP53803 58 aaKnown RBP11.49□□□□□ -0.57
AP4E1-202ENST00000558439 SPAG8Q99932 426 aaPredicted RBP11.49□□□□□ -0.57
AP4E1-202ENST00000558439 ZMAT4Q9H898 229 aa11.49□□□□□ -0.57
AP4E1-202ENST00000558439 TRAV8-4A0A0B4J246 113 aa11.48□□□□□ -0.57
AP4E1-202ENST00000558439 A0A0J9YY99 117 aa11.48□□□□□ -0.57
AP4E1-202ENST00000558439 GAGE6Q13070 117 aa11.48□□□□□ -0.57
AP4E1-202ENST00000558439 NDUFA11Q86Y39 141 aa11.48□□□□□ -0.57
AP4E1-202ENST00000558439 NTN5Q8WTR8 489 aaPredicted RBP11.48□□□□□ -0.57
AP4E1-202ENST00000558439 SOCS3O14543 225 aa11.47□□□□□ -0.57
AP4E1-202ENST00000558439 CRYGDP07320 174 aa11.47□□□□□ -0.57
AP4E1-202ENST00000558439 IGHV3-30-3P0DP02 117 aa11.47□□□□□ -0.57
AP4E1-202ENST00000558439 H3BMM0 161 aa11.47□□□□□ -0.57
AP4E1-202ENST00000558439 UFSP1Q6NVU6 142 aa11.47□□□□□ -0.57
AP4E1-202ENST00000558439 Q9H8V8 135 aa11.46□□□□□ -0.57
AP4E1-202ENST00000558439 FASNP49327 2511 aaKnown RBP11.46□□□□□ -0.57
AP4E1-202ENST00000558439 A8MZ25 164 aa11.46□□□□□ -0.58
AP4E1-202ENST00000558439 TRBV27A0A0K0K1C4 114 aa11.46□□□□□ -0.58
AP4E1-202ENST00000558439 LGALS9O00182 355 aa11.46□□□□□ -0.58
AP4E1-202ENST00000558439 A0A096LPF7 62 aa11.45□□□□□ -0.58
AP4E1-202ENST00000558439 GAGE2BQ13066 116 aa11.45□□□□□ -0.58
AP4E1-202ENST00000558439 GAGE2EQ4V326 116 aa11.45□□□□□ -0.58
AP4E1-202ENST00000558439 ANAPC13Q9BS18 74 aa11.45□□□□□ -0.58
AP4E1-202ENST00000558439 MAP6D1Q9H9H5 199 aa11.45□□□□□ -0.58
AP4E1-202ENST00000558439 GAGE2DQ9UEU5 116 aa11.45□□□□□ -0.58
AP4E1-202ENST00000558439 Q6ZUT4 128 aa11.45□□□□□ -0.58
AP4E1-202ENST00000558439 IGLV4-3A0A075B6K6 122 aa11.44□□□□□ -0.58
AP4E1-202ENST00000558439 TRBV7-3A0A075B6L6 115 aa11.44□□□□□ -0.58
AP4E1-202ENST00000558439 TCL1BO95988 128 aa11.44□□□□□ -0.58
AP4E1-202ENST00000558439 ZNF22P17026 224 aaPredicted RBP11.44□□□□□ -0.58
AP4E1-202ENST00000558439 IGHV4-31P0DP07 118 aa11.44□□□□□ -0.58
AP4E1-202ENST00000558439 PFN2P35080 140 aa11.44□□□□□ -0.58
AP4E1-202ENST00000558439 Q6YL49 198 aa11.44□□□□□ -0.58
AP4E1-202ENST00000558439 COL12A1Q99715 3063 aa11.44□□□□□ -0.58
AP4E1-202ENST00000558439 PAX4O43316 350 aa11.44□□□□□ -0.58
AP4E1-202ENST00000558439 HIST2H2BCQ6DN03 193 aa11.44□□□□□ -0.58
AP4E1-202ENST00000558439 C1QTNF4Q9BXJ3 329 aa11.44□□□□□ -0.58
AP4E1-202ENST00000558439 TMEM89A2RUT3 159 aa11.43□□□□□ -0.58
AP4E1-202ENST00000558439 SPANXB1Q9NS25 103 aaPredicted RBP11.43□□□□□ -0.58
AP4E1-202ENST00000558439 INSL3P51460 131 aa11.43□□□□□ -0.58
AP4E1-202ENST00000558439 FOXI1Q12951 378 aa11.43□□□□□ -0.58
AP4E1-202ENST00000558439 SLC25A29Q8N8R3 303 aa11.43□□□□□ -0.58
AP4E1-202ENST00000558439 IGIPA6NJ69 53 aa11.43□□□□□ -0.58
AP4E1-202ENST00000558439 SPANXA1Q9NS26 97 aa11.43□□□□□ -0.58
AP4E1-202ENST00000558439 CRIP2P52943 208 aaPredicted RBP11.42□□□□□ -0.58
AP4E1-202ENST00000558439 KRTAP10-9P60411 292 aa11.42□□□□□ -0.58
AP4E1-202ENST00000558439 ZFAND6Q6FIF0 208 aa11.42□□□□□ -0.58
AP4E1-202ENST00000558439 TMEM243Q9BU79 118 aa11.42□□□□□ -0.58
AP4E1-202ENST00000558439 C6orf226Q5I0X4 101 aa11.42□□□□□ -0.58
AP4E1-202ENST00000558439 TSHBP01222 138 aa11.42□□□□□ -0.58
AP4E1-202ENST00000558439 ZNF702PQ9H963 129 aa11.42□□□□□ -0.58
AP4E1-202ENST00000558439 ANKRD29Q8N6D5 301 aa11.41□□□□□ -0.58
AP4E1-202ENST00000558439 C9orf85Q96MD7 179 aa11.41□□□□□ -0.58
AP4E1-202ENST00000558439 CITED2Q99967 270 aaPredicted RBP11.41□□□□□ -0.58
AP4E1-202ENST00000558439 LINC00467Q9BRT7 94 aa11.41□□□□□ -0.58
AP4E1-202ENST00000558439 CLPSL2Q6UWE3 100 aa11.41□□□□□ -0.58
AP4E1-202ENST00000558439 TEN1Q86WV5 123 aa11.41□□□□□ -0.58
AP4E1-202ENST00000558439 ODF3Q96PU9 254 aa11.41□□□□□ -0.58
AP4E1-202ENST00000558439 A0A0J9YXY3 114 aa11.4□□□□□ -0.58
AP4E1-202ENST00000558439 CRPP02741 224 aa11.4□□□□□ -0.58
AP4E1-202ENST00000558439 HERVK_113P63121 156 aa11.4□□□□□ -0.58
AP4E1-202ENST00000558439 Q6ZTI0 123 aa11.4□□□□□ -0.58
AP4E1-202ENST00000558439 UBE2WQ96B02 151 aa11.4□□□□□ -0.58
AP4E1-202ENST00000558439 WFDC11Q8NEX6 87 aa11.39□□□□□ -0.59
AP4E1-202ENST00000558439 CARD19Q96LW7 228 aa11.39□□□□□ -0.59
AP4E1-202ENST00000558439 CDKN2A-AS1Q9UH64 79 aa11.39□□□□□ -0.59
AP4E1-202ENST00000558439 TSPEAR-AS2P59090 65 aa11.39□□□□□ -0.59
AP4E1-202ENST00000558439 DEFB114Q30KQ6 69 aa11.39□□□□□ -0.59
AP4E1-202ENST00000558439 TRBV6-5A0A0K0K1A5 114 aa11.39□□□□□ -0.59
AP4E1-202ENST00000558439 TMEM223A0PJW6 202 aa11.39□□□□□ -0.59
AP4E1-202ENST00000558439 ZNF580Q9UK33 172 aa11.39□□□□□ -0.59
AP4E1-202ENST00000558439 IGHV1-58A0A0C4DH39 117 aa11.38□□□□□ -0.59
AP4E1-202ENST00000558439 IGLV4-69A0A075B6H9 119 aa11.38□□□□□ -0.59
AP4E1-202ENST00000558439 NFE4Q86UQ8 179 aa11.38□□□□□ -0.59
AP4E1-202ENST00000558439 CLEC2BQ92478 149 aa11.38□□□□□ -0.59
AP4E1-202ENST00000558439 C5orf38Q86SI9 138 aa11.38□□□□□ -0.59
AP4E1-202ENST00000558439 C4orf3Q8WVX3 66 aa11.38□□□□□ -0.59
AP4E1-202ENST00000558439 LINC01620Q4KN68 170 aa11.37□□□□□ -0.59
AP4E1-202ENST00000558439 MALP21145 153 aa11.37□□□□□ -0.59
AP4E1-202ENST00000558439 CMC4P56277 68 aaPredicted RBP11.37□□□□□ -0.59
AP4E1-202ENST00000558439 CFAP126Q5VTH2 177 aa11.37□□□□□ -0.59
AP4E1-202ENST00000558439 IGHV3-30P01768 117 aa11.36□□□□□ -0.59
AP4E1-202ENST00000558439 IGHV3-30-5P0DP03 117 aa11.36□□□□□ -0.59
AP4E1-202ENST00000558439 NXPH4O95158 308 aa11.36□□□□□ -0.59
AP4E1-202ENST00000558439 CFAP161Q6P656 301 aa11.36□□□□□ -0.59
AP4E1-202ENST00000558439 VSIG2Q96IQ7 327 aa11.36□□□□□ -0.59
AP4E1-202ENST00000558439 DNAJC9-AS1A6NH13 148 aa11.35□□□□□ -0.59
AP4E1-202ENST00000558439 ICOSQ9Y6W8 199 aa11.35□□□□□ -0.59
AP4E1-202ENST00000558439 KIF25-AS1Q9Y6Z4 181 aa11.35□□□□□ -0.59
AP4E1-202ENST00000558439 K7EQD1 137 aa11.35□□□□□ -0.59
AP4E1-202ENST00000558439 Q6ZSV7 163 aa11.35□□□□□ -0.59
AP4E1-202ENST00000558439 DNAJC30Q96LL9 226 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms