RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 CMC4P56277 68 aaPredicted RBP4.09□□□□□ -1.75
GABPB1-207ENST00000558335 FXYD7P58549 80 aa4.09□□□□□ -1.75
GABPB1-207ENST00000558335 BEAN1Q3B7T3 259 aa4.09□□□□□ -1.75
GABPB1-207ENST00000558335 ZNF876PQ49A33 203 aa4.09□□□□□ -1.75
GABPB1-207ENST00000558335 ATP5EP2Q5VTU8 51 aa4.09□□□□□ -1.75
GABPB1-207ENST00000558335 Q6JHZ5 121 aa4.09□□□□□ -1.75
GABPB1-207ENST00000558335 KIF25-AS1Q9Y6Z4 181 aa4.09□□□□□ -1.75
GABPB1-207ENST00000558335 PIEZO2Q9H5I5 2752 aa4.08□□□□□ -1.76
GABPB1-207ENST00000558335 IGHV3OR16-8A0A075B7F1 116 aa4.08□□□□□ -1.76
GABPB1-207ENST00000558335 A0A0J9YXY3 114 aa4.08□□□□□ -1.76
GABPB1-207ENST00000558335 NDUFS5O43920 106 aa4.08□□□□□ -1.76
GABPB1-207ENST00000558335 IGHV4-39P01824 125 aa4.08□□□□□ -1.76
GABPB1-207ENST00000558335 RNASE3P12724 160 aaKnown RBP4.08□□□□□ -1.76
GABPB1-207ENST00000558335 COX6B1P14854 86 aa4.08□□□□□ -1.76
GABPB1-207ENST00000558335 CIRBPQ14011 172 aaKnown RBP4.08□□□□□ -1.76
GABPB1-207ENST00000558335 SUMO4Q6EEV6 95 aa4.08□□□□□ -1.76
GABPB1-207ENST00000558335 LINC01561Q8N1V8 128 aa4.08□□□□□ -1.76
GABPB1-207ENST00000558335 MAPKAPK5-AS1Q8N8E1 139 aa4.08□□□□□ -1.76
GABPB1-207ENST00000558335 LINC01356Q8N9X3 169 aa4.08□□□□□ -1.76
GABPB1-207ENST00000558335 Q96MF0 132 aa4.08□□□□□ -1.76
GABPB1-207ENST00000558335 LINC00467Q9BRT7 94 aa4.08□□□□□ -1.76
GABPB1-207ENST00000558335 KLK15Q9H2R5 256 aa4.08□□□□□ -1.76
GABPB1-207ENST00000558335 PKDREJQ9NTG1 2253 aa4.07□□□□□ -1.76
GABPB1-207ENST00000558335 MYO15AQ9UKN7 3530 aa4.07□□□□□ -1.76
GABPB1-207ENST00000558335 PRRC2CQ9Y520 2896 aaKnown RBP4.07□□□□□ -1.76
GABPB1-207ENST00000558335 IGHV3OR16-13A0A075B7E8 117 aa4.07□□□□□ -1.76
GABPB1-207ENST00000558335 IGHV3-49A0A0A0MS15 119 aa4.07□□□□□ -1.76
GABPB1-207ENST00000558335 IGHV3-74A0A0B4J1X5 117 aa4.07□□□□□ -1.76
GABPB1-207ENST00000558335 IGHV3-16A0A0C4DH30 117 aa4.07□□□□□ -1.76
GABPB1-207ENST00000558335 A0A0J9YY99 117 aa4.07□□□□□ -1.76
GABPB1-207ENST00000558335 TRBV10-3A0A0K0K1G6 114 aa4.07□□□□□ -1.76
GABPB1-207ENST00000558335 RBMY1BA6NDE4 496 aaKnown RBP4.07□□□□□ -1.76
GABPB1-207ENST00000558335 RBMY1EA6NEQ0 496 aaKnown RBP4.07□□□□□ -1.76
GABPB1-207ENST00000558335 H7C423 109 aa4.07□□□□□ -1.76
GABPB1-207ENST00000558335 K7EQG2 157 aa4.07□□□□□ -1.76
GABPB1-207ENST00000558335 TIMM17BO60830 172 aa4.07□□□□□ -1.76
GABPB1-207ENST00000558335 RBMY1DP0C7P1 496 aaKnown RBP4.07□□□□□ -1.76
GABPB1-207ENST00000558335 RBMY1A1P0DJD3 496 aaKnown RBP4.07□□□□□ -1.76
GABPB1-207ENST00000558335 RBMY1CP0DJD4 496 aa4.07□□□□□ -1.76
GABPB1-207ENST00000558335 RBMY1FQ15415 496 aaKnown RBP4.07□□□□□ -1.76
GABPB1-207ENST00000558335 FAM222AQ5U5X8 452 aa4.07□□□□□ -1.76
GABPB1-207ENST00000558335 CEMP1Q6PRD7 247 aaPredicted RBP4.07□□□□□ -1.76
GABPB1-207ENST00000558335 UNQ9165/PRO28630Q6UXU0 137 aa4.07□□□□□ -1.76
GABPB1-207ENST00000558335 C20orf203Q8NBC4 194 aa4.07□□□□□ -1.76
GABPB1-207ENST00000558335 DCANP1Q8TF63 244 aa4.07□□□□□ -1.76
GABPB1-207ENST00000558335 RPL39LQ96EH5 51 aaKnown RBP4.07□□□□□ -1.76
GABPB1-207ENST00000558335 UBE2E2Q96LR5 201 aa4.07□□□□□ -1.76
GABPB1-207ENST00000558335 CNOT1A5YKK6 2376 aaKnown RBP4.07□□□□□ -1.76
GABPB1-207ENST00000558335 ACACAQ13085 2346 aa4.07□□□□□ -1.76
GABPB1-207ENST00000558335 CFAP54Q96N23 3096 aa4.06□□□□□ -1.76
GABPB1-207ENST00000558335 TRAV12-3A0A0B4J271 114 aa4.06□□□□□ -1.76
GABPB1-207ENST00000558335 LINC01548A6NM66 108 aa4.06□□□□□ -1.76
GABPB1-207ENST00000558335 M0QY20 66 aa4.06□□□□□ -1.76
GABPB1-207ENST00000558335 GNRH2O43555 120 aa4.06□□□□□ -1.76
GABPB1-207ENST00000558335 IGHV3-30P01768 117 aa4.06□□□□□ -1.76
GABPB1-207ENST00000558335 IGHV3-30-5P0DP03 117 aa4.06□□□□□ -1.76
GABPB1-207ENST00000558335 HOXD3P31249 432 aaPredicted RBP4.06□□□□□ -1.76
GABPB1-207ENST00000558335 LINC00315P59091 139 aa4.06□□□□□ -1.76
GABPB1-207ENST00000558335 DAZ2Q13117 558 aaKnown RBP4.06□□□□□ -1.76
GABPB1-207ENST00000558335 CDSNQ15517 529 aa4.06□□□□□ -1.76
GABPB1-207ENST00000558335 PRR9Q5T870 116 aa4.06□□□□□ -1.76
GABPB1-207ENST00000558335 DAZ4Q86SG3 579 aaKnown RBP4.06□□□□□ -1.76
GABPB1-207ENST00000558335 TIMM21Q9BVV7 248 aa4.06□□□□□ -1.76
GABPB1-207ENST00000558335 DAZ3Q9NR90 486 aaKnown RBP4.06□□□□□ -1.76
GABPB1-207ENST00000558335 Q9UF83 564 aa4.06□□□□□ -1.76
GABPB1-207ENST00000558335 FRYLO94915 3013 aa4.06□□□□□ -1.76
GABPB1-207ENST00000558335 EP300Q09472 2414 aaPredicted RBP4.05□□□□□ -1.76
GABPB1-207ENST00000558335 PCNX1Q96RV3 2341 aa4.05□□□□□ -1.76
GABPB1-207ENST00000558335 ZNF292O60281 2723 aa4.05□□□□□ -1.76
GABPB1-207ENST00000558335 FREM2Q5SZK8 3169 aa4.05□□□□□ -1.76
GABPB1-207ENST00000558335 IGLV4-69A0A075B6H9 119 aa4.05□□□□□ -1.76
GABPB1-207ENST00000558335 IGHV4-61A0A0C4DH41 118 aa4.05□□□□□ -1.76
GABPB1-207ENST00000558335 TMEM223A0PJW6 202 aa4.05□□□□□ -1.76
GABPB1-207ENST00000558335 A8MTW9 85 aa4.05□□□□□ -1.76
GABPB1-207ENST00000558335 LST1O00453 97 aa4.05□□□□□ -1.76
GABPB1-207ENST00000558335 GAS8-AS1O95177 125 aa4.05□□□□□ -1.76
GABPB1-207ENST00000558335 IGHV3-11P01762 117 aa4.05□□□□□ -1.76
GABPB1-207ENST00000558335 LY6EQ16553 131 aa4.05□□□□□ -1.76
GABPB1-207ENST00000558335 SFTA2Q6UW10 78 aa4.05□□□□□ -1.76
GABPB1-207ENST00000558335 BRD3OSQ6XYD6 125 aa4.05□□□□□ -1.76
GABPB1-207ENST00000558335 LINC00482Q8N8I6 264 aa4.05□□□□□ -1.76
GABPB1-207ENST00000558335 WFDC11Q8NEX6 87 aa4.05□□□□□ -1.76
GABPB1-207ENST00000558335 DYNLRB2Q8TF09 96 aa4.05□□□□□ -1.76
GABPB1-207ENST00000558335 TMEM263Q8WUH6 116 aaKnown RBP4.05□□□□□ -1.76
GABPB1-207ENST00000558335 OVOL2Q9BRP0 275 aa4.05□□□□□ -1.76
GABPB1-207ENST00000558335 SPEGQ15772 3267 aa4.05□□□□□ -1.76
GABPB1-207ENST00000558335 CEP250Q9BV73 2442 aa4.05□□□□□ -1.76
GABPB1-207ENST00000558335 VPS13AQ96RL7 3174 aa4.05□□□□□ -1.76
GABPB1-207ENST00000558335 APC2O95996 2303 aa4.04□□□□□ -1.76
GABPB1-207ENST00000558335 ROS1P08922 2347 aa4.04□□□□□ -1.76
GABPB1-207ENST00000558335 ABCA1O95477 2261 aa4.04□□□□□ -1.76
GABPB1-207ENST00000558335 TRAV7A0A075B6U4 112 aa4.04□□□□□ -1.76
GABPB1-207ENST00000558335 UBE2L6O14933 153 aa4.04□□□□□ -1.76
GABPB1-207ENST00000558335 CCKP06307 115 aa4.04□□□□□ -1.76
GABPB1-207ENST00000558335 DAD1P61803 113 aa4.04□□□□□ -1.76
GABPB1-207ENST00000558335 KLKP1Q107X0 134 aa4.04□□□□□ -1.76
GABPB1-207ENST00000558335 Q1RN00 199 aa4.04□□□□□ -1.76
GABPB1-207ENST00000558335 FAM74A4Q5TZK3 123 aa4.04□□□□□ -1.76
GABPB1-207ENST00000558335 ANKRD11Q6UB99 2663 aaPredicted RBP4.04□□□□□ -1.76
GABPB1-207ENST00000558335 MAP1BP46821 2468 aaKnown RBP4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms