RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 DSCR9P59020 149 aa2.77□□□□□ -1.97
ATXN3-248ENST00000558190 PRO0461Q9UI25 63 aa2.76□□□□□ -1.97
ATXN3-248ENST00000558190 IGKV4-1P06312 121 aa2.76□□□□□ -1.97
ATXN3-248ENST00000558190 ZNF883P0CG24 379 aa2.76□□□□□ -1.97
ATXN3-248ENST00000558190 NRACQ8N912 160 aa2.76□□□□□ -1.97
ATXN3-248ENST00000558190 SIGLEC1Q9BZZ2 1709 aa2.76□□□□□ -1.97
ATXN3-248ENST00000558190 AHDC1Q5TGY3 1603 aaPredicted RBP2.76□□□□□ -1.97
ATXN3-248ENST00000558190 LINC01619G3V211 115 aa2.76□□□□□ -1.97
ATXN3-248ENST00000558190 FOCADQ5VW36 1801 aa2.76□□□□□ -1.97
ATXN3-248ENST00000558190 IGLV1-44P01699 117 aa2.76□□□□□ -1.97
ATXN3-248ENST00000558190 LY6DQ14210 128 aa2.76□□□□□ -1.97
ATXN3-248ENST00000558190 KDM3BQ7LBC6 1761 aa2.76□□□□□ -1.97
ATXN3-248ENST00000558190 DMBT1Q9UGM3 2413 aaPredicted RBP2.76□□□□□ -1.97
ATXN3-248ENST00000558190 UBE2BP63146 152 aa2.76□□□□□ -1.97
ATXN3-248ENST00000558190 KAAG1Q9UBP8 84 aa2.76□□□□□ -1.97
ATXN3-248ENST00000558190 CELA1Q9UNI1 258 aa2.76□□□□□ -1.97
ATXN3-248ENST00000558190 Q8N7P7 452 aa2.76□□□□□ -1.97
ATXN3-248ENST00000558190 ANKRD36A6QL64 1941 aa2.76□□□□□ -1.97
ATXN3-248ENST00000558190 CCL19Q99731 98 aa2.76□□□□□ -1.97
ATXN3-248ENST00000558190 TIAM2Q8IVF5 1701 aa2.76□□□□□ -1.97
ATXN3-248ENST00000558190 C5P01031 1676 aa2.76□□□□□ -1.97
ATXN3-248ENST00000558190 TUBGCP6Q96RT7 1819 aa2.76□□□□□ -1.97
ATXN3-248ENST00000558190 H3BUX3 64 aa2.76□□□□□ -1.97
ATXN3-248ENST00000558190 A0A1B0GUL6 1792 aa2.75□□□□□ -1.97
ATXN3-248ENST00000558190 BCORQ6W2J9 1755 aa2.75□□□□□ -1.97
ATXN3-248ENST00000558190 TAF1P21675 1872 aa2.75□□□□□ -1.97
ATXN3-248ENST00000558190 A0A096LNI7 61 aa2.75□□□□□ -1.97
ATXN3-248ENST00000558190 CCL18P55774 89 aa2.75□□□□□ -1.97
ATXN3-248ENST00000558190 WFDC10BQ8IUB3 73 aa2.75□□□□□ -1.97
ATXN3-248ENST00000558190 GLI3P10071 1580 aa2.75□□□□□ -1.97
ATXN3-248ENST00000558190 RBBP6Q7Z6E9 1792 aaKnown RBP2.75□□□□□ -1.97
ATXN3-248ENST00000558190 DCANP1Q8TF63 244 aa2.75□□□□□ -1.97
ATXN3-248ENST00000558190 DEFB4AO15263 64 aa2.75□□□□□ -1.97
ATXN3-248ENST00000558190 IGLV11-55A0A075B6I3 123 aa2.75□□□□□ -1.97
ATXN3-248ENST00000558190 CLPSL2Q6UWE3 100 aa2.75□□□□□ -1.97
ATXN3-248ENST00000558190 LY75O60449 1722 aa2.75□□□□□ -1.97
ATXN3-248ENST00000558190 ANKRD31Q8N7Z5 1873 aa2.75□□□□□ -1.97
ATXN3-248ENST00000558190 LST1O00453 97 aa2.75□□□□□ -1.97
ATXN3-248ENST00000558190 A0A087WVE0 104 aa2.75□□□□□ -1.97
ATXN3-248ENST00000558190 LINC00474Q9P2X8 69 aa2.75□□□□□ -1.97
ATXN3-248ENST00000558190 RNASE3P12724 160 aaKnown RBP2.75□□□□□ -1.97
ATXN3-248ENST00000558190 EIF4EBP1Q13541 118 aaPredicted RBP2.75□□□□□ -1.97
ATXN3-248ENST00000558190 BTAF1O14981 1849 aa2.75□□□□□ -1.97
ATXN3-248ENST00000558190 HILS1P60008 231 aa2.75□□□□□ -1.97
ATXN3-248ENST00000558190 CCL24O00175 119 aa2.75□□□□□ -1.97
ATXN3-248ENST00000558190 IGHV4-30-4P0DP06 118 aa2.75□□□□□ -1.97
ATXN3-248ENST00000558190 IGHV4-31P0DP07 118 aa2.75□□□□□ -1.97
ATXN3-248ENST00000558190 UBE2D1P51668 147 aa2.75□□□□□ -1.97
ATXN3-248ENST00000558190 LINC00467Q9BRT7 94 aa2.75□□□□□ -1.97
ATXN3-248ENST00000558190 LINC00336Q6ZUF6 198 aa2.75□□□□□ -1.97
ATXN3-248ENST00000558190 PDCD11Q14690 1871 aaKnown RBP2.75□□□□□ -1.97
ATXN3-248ENST00000558190 NCKAP5O14513 1909 aa2.74□□□□□ -1.97
ATXN3-248ENST00000558190 PLXNA1Q9UIW2 1896 aa2.74□□□□□ -1.97
ATXN3-248ENST00000558190 UNQ9165/PRO28630Q6UXU0 137 aa2.74□□□□□ -1.97
ATXN3-248ENST00000558190 UBE2AP49459 152 aa2.74□□□□□ -1.97
ATXN3-248ENST00000558190 UBE2D3P61077 147 aa2.74□□□□□ -1.97
ATXN3-248ENST00000558190 UBE2D2P62837 147 aa2.74□□□□□ -1.97
ATXN3-248ENST00000558190 ADAMTS7Q9UKP4 1686 aa2.74□□□□□ -1.97
ATXN3-248ENST00000558190 SETD2Q9BYW2 2564 aaPredicted RBP2.74□□□□□ -1.97
ATXN3-248ENST00000558190 Q8N9W7 124 aa2.74□□□□□ -1.97
ATXN3-248ENST00000558190 H0Y9J4 135 aa2.74□□□□□ -1.97
ATXN3-248ENST00000558190 ARAP2Q8WZ64 1704 aa2.74□□□□□ -1.97
ATXN3-248ENST00000558190 TRBV10-1A0A0K0K1A3 114 aa2.74□□□□□ -1.97
ATXN3-248ENST00000558190 SAA4P35542 130 aa2.74□□□□□ -1.97
ATXN3-248ENST00000558190 CHCHD10Q8WYQ3 142 aaPredicted RBP2.74□□□□□ -1.97
ATXN3-248ENST00000558190 TRBV27A0A0K0K1C4 114 aa2.74□□□□□ -1.97
ATXN3-248ENST00000558190 ZFAND2AQ8N6M9 145 aa2.74□□□□□ -1.97
ATXN3-248ENST00000558190 DOCK1Q14185 1865 aa2.74□□□□□ -1.97
ATXN3-248ENST00000558190 MSMPQ1L6U9 139 aa2.74□□□□□ -1.97
ATXN3-248ENST00000558190 IGHV4-38-2P0DP08 117 aa2.74□□□□□ -1.97
ATXN3-248ENST00000558190 C10orf25Q5T742 122 aa2.74□□□□□ -1.97
ATXN3-248ENST00000558190 LINC01356Q8N9X3 169 aa2.74□□□□□ -1.97
ATXN3-248ENST00000558190 LY6LH3BQJ8 138 aa2.74□□□□□ -1.97
ATXN3-248ENST00000558190 NTM-AS1Q6ZSK4 140 aa2.74□□□□□ -1.97
ATXN3-248ENST00000558190 KLK12Q9UKR0 248 aa2.74□□□□□ -1.97
ATXN3-248ENST00000558190 YLPM1P49750 1951 aaKnown RBP2.74□□□□□ -1.97
ATXN3-248ENST00000558190 IBA57-AS1B1ANH7 110 aa2.73□□□□□ -1.97
ATXN3-248ENST00000558190 DOCK5Q9H7D0 1870 aa2.73□□□□□ -1.97
ATXN3-248ENST00000558190 TMEM89A2RUT3 159 aa2.73□□□□□ -1.97
ATXN3-248ENST00000558190 TSHBP01222 138 aa2.73□□□□□ -1.97
ATXN3-248ENST00000558190 MED14OSP0DP75 135 aa2.73□□□□□ -1.97
ATXN3-248ENST00000558190 CXCL6P80162 114 aa2.73□□□□□ -1.97
ATXN3-248ENST00000558190 CAMK2N2Q96S95 79 aa2.73□□□□□ -1.97
ATXN3-248ENST00000558190 F8WDY8 70 aa2.73□□□□□ -1.97
ATXN3-248ENST00000558190 NDUFA1O15239 70 aa2.73□□□□□ -1.97
ATXN3-248ENST00000558190 ZNF236Q9UL36 1845 aa2.73□□□□□ -1.97
ATXN3-248ENST00000558190 WFDC13Q8IUB5 93 aa2.73□□□□□ -1.97
ATXN3-248ENST00000558190 SBSPONQ8IVN8 264 aa2.73□□□□□ -1.97
ATXN3-248ENST00000558190 RPL28P46779 137 aaKnown RBP2.73□□□□□ -1.97
ATXN3-248ENST00000558190 SBF1O95248 1867 aa2.73□□□□□ -1.97
ATXN3-248ENST00000558190 XAGE1AQ9HD64 81 aa2.73□□□□□ -1.97
ATXN3-248ENST00000558190 DEFB112Q30KQ8 113 aa2.73□□□□□ -1.97
ATXN3-248ENST00000558190 EML6Q6ZMW3 1958 aa2.73□□□□□ -1.97
ATXN3-248ENST00000558190 UNQ6190/PRO20217Q6UXQ8 127 aa2.73□□□□□ -1.97
ATXN3-248ENST00000558190 PLXNB2O15031 1838 aa2.72□□□□□ -1.97
ATXN3-248ENST00000558190 NRAPQ86VF7 1730 aa2.72□□□□□ -1.97
ATXN3-248ENST00000558190 ANK1P16157 1881 aa2.72□□□□□ -1.97
ATXN3-248ENST00000558190 ATP5EP2Q5VTU8 51 aa2.72□□□□□ -1.97
ATXN3-248ENST00000558190 FAM222AQ5U5X8 452 aa2.72□□□□□ -1.97
ATXN3-248ENST00000558190 CASC2Q6XLA1 102 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms