RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 SFTA2Q6UW10 78 aa1.45□□□□□ -2.18
SPG11-206ENST00000558093 Q6ZS52 159 aa1.45□□□□□ -2.18
SPG11-206ENST00000558093 ZCCHC13Q8WW36 166 aaKnown RBP1.45□□□□□ -2.18
SPG11-206ENST00000558093 C14orf132Q9NPU4 83 aa1.45□□□□□ -2.18
SPG11-206ENST00000558093 MANBALQ9NQG1 85 aa1.45□□□□□ -2.18
SPG11-206ENST00000558093 DIP2AQ14689 1571 aa1.45□□□□□ -2.18
SPG11-206ENST00000558093 UBR3Q6ZT12 1888 aa1.45□□□□□ -2.18
SPG11-206ENST00000558093 CACNA1DQ01668 2161 aa1.45□□□□□ -2.18
SPG11-206ENST00000558093 MED13Q9UHV7 2174 aa1.45□□□□□ -2.18
SPG11-206ENST00000558093 ABCC1P33527 1531 aa1.45□□□□□ -2.18
SPG11-206ENST00000558093 FREM3P0C091 2139 aa1.45□□□□□ -2.18
SPG11-206ENST00000558093 MYO7BQ6PIF6 2116 aa1.45□□□□□ -2.18
SPG11-206ENST00000558093 CEP192Q8TEP8 1941 aa1.44□□□□□ -2.18
SPG11-206ENST00000558093 CRYBG1Q9Y4K1 1723 aa1.44□□□□□ -2.18
SPG11-206ENST00000558093 UNC13BO14795 1591 aa1.44□□□□□ -2.18
SPG11-206ENST00000558093 GLI2P10070 1586 aa1.44□□□□□ -2.18
SPG11-206ENST00000558093 TRBV10-3A0A0K0K1G6 114 aa1.44□□□□□ -2.18
SPG11-206ENST00000558093 TCRBV4S1A1TA0A5B7 111 aa1.44□□□□□ -2.18
SPG11-206ENST00000558093 E7EUB6 86 aa1.44□□□□□ -2.18
SPG11-206ENST00000558093 F2Z2F3 143 aa1.44□□□□□ -2.18
SPG11-206ENST00000558093 H7BZZ5 65 aa1.44□□□□□ -2.18
SPG11-206ENST00000558093 NDUFC1O43677 76 aa1.44□□□□□ -2.18
SPG11-206ENST00000558093 IGHV3-53P01767 116 aa1.44□□□□□ -2.18
SPG11-206ENST00000558093 MIR22HGQ0VDD5 57 aa1.44□□□□□ -2.18
SPG11-206ENST00000558093 LYPD6Q86Y78 171 aa1.44□□□□□ -2.18
SPG11-206ENST00000558093 FAM223AQ8IWN6 122 aa1.44□□□□□ -2.18
SPG11-206ENST00000558093 Q8TAT8 98 aa1.44□□□□□ -2.18
SPG11-206ENST00000558093 C20orf166-AS1Q96NR2 134 aa1.44□□□□□ -2.18
SPG11-206ENST00000558093 BPESC1Q9GZL8 116 aa1.44□□□□□ -2.18
SPG11-206ENST00000558093 PLCH1Q4KWH8 1693 aa1.44□□□□□ -2.18
SPG11-206ENST00000558093 LRRC7Q96NW7 1537 aa1.44□□□□□ -2.18
SPG11-206ENST00000558093 NESP48681 1621 aa1.44□□□□□ -2.18
SPG11-206ENST00000558093 PI4KAP42356 2102 aa1.43□□□□□ -2.18
SPG11-206ENST00000558093 KIAA0100Q14667 2235 aaKnown RBP1.43□□□□□ -2.18
SPG11-206ENST00000558093 ADAMTS7Q9UKP4 1686 aa1.43□□□□□ -2.18
SPG11-206ENST00000558093 TRAV10A0A0B4J240 114 aa1.43□□□□□ -2.18
SPG11-206ENST00000558093 ERC2-IT1O76042 136 aa1.43□□□□□ -2.18
SPG11-206ENST00000558093 CXCL8P10145 99 aa1.43□□□□□ -2.18
SPG11-206ENST00000558093 DSCR4P56555 118 aaPredicted RBP1.43□□□□□ -2.18
SPG11-206ENST00000558093 ZNF56Q15929 161 aa1.43□□□□□ -2.18
SPG11-206ENST00000558093 KRTAP21-2Q3LI59 83 aa1.43□□□□□ -2.18
SPG11-206ENST00000558093 ZNF826PQ6ZT77 177 aa1.43□□□□□ -2.18
SPG11-206ENST00000558093 Q8NAQ8 132 aa1.43□□□□□ -2.18
SPG11-206ENST00000558093 TMEM254Q8TBM7 123 aa1.43□□□□□ -2.18
SPG11-206ENST00000558093 CYP4F30PQ9H0H9 118 aa1.43□□□□□ -2.18
SPG11-206ENST00000558093 CDC42SE1Q9NRR8 79 aa1.43□□□□□ -2.18
SPG11-206ENST00000558093 KCPQ6ZWJ8 1503 aa1.43□□□□□ -2.18
SPG11-206ENST00000558093 ASXL1Q8IXJ9 1541 aa1.43□□□□□ -2.18
SPG11-206ENST00000558093 IFT172Q9UG01 1749 aa1.43□□□□□ -2.18
SPG11-206ENST00000558093 NRXN1Q9ULB1 1477 aa1.43□□□□□ -2.18
SPG11-206ENST00000558093 FBN1P35555 2871 aaKnown RBP1.42□□□□□ -2.18
SPG11-206ENST00000558093 PCDH15Q96QU1 1955 aa1.42□□□□□ -2.18
SPG11-206ENST00000558093 A0A087WSZ3 146 aa1.42□□□□□ -2.18
SPG11-206ENST00000558093 TRBV7-1A0A0A6YYK4 115 aa1.42□□□□□ -2.18
SPG11-206ENST00000558093 TEX49A0A1B0GTD5 131 aa1.42□□□□□ -2.18
SPG11-206ENST00000558093 A0A1B0GU33 70 aa1.42□□□□□ -2.18
SPG11-206ENST00000558093 ACYP1P07311 99 aa1.42□□□□□ -2.18
SPG11-206ENST00000558093 SMIM11AP58511 58 aa1.42□□□□□ -2.18
SPG11-206ENST00000558093 KRTAP25-1Q3LHN0 102 aa1.42□□□□□ -2.18
SPG11-206ENST00000558093 KRTAP6-3Q3LI67 103 aa1.42□□□□□ -2.18
SPG11-206ENST00000558093 SPANXN5Q5MJ07 72 aa1.42□□□□□ -2.18
SPG11-206ENST00000558093 TMEM170BQ5T4T1 132 aa1.42□□□□□ -2.18
SPG11-206ENST00000558093 LINC00643Q86TS7 51 aa1.42□□□□□ -2.18
SPG11-206ENST00000558093 CLECL1Q8IZS7 167 aa1.42□□□□□ -2.18
SPG11-206ENST00000558093 Q8N6K4 173 aa1.42□□□□□ -2.18
SPG11-206ENST00000558093 LINC01600Q96MT4 127 aa1.42□□□□□ -2.18
SPG11-206ENST00000558093 PRO1854Q9UHT4 67 aa1.42□□□□□ -2.18
SPG11-206ENST00000558093 HILPDAQ9Y5L2 63 aa1.42□□□□□ -2.18
SPG11-206ENST00000558093 TNRC6BQ9UPQ9 1833 aaKnown RBP1.42□□□□□ -2.18
SPG11-206ENST00000558093 IQSEC2Q5JU85 1478 aa1.42□□□□□ -2.18
SPG11-206ENST00000558093 LRRC9Q6ZRR7 1453 aa1.42□□□□□ -2.18
SPG11-206ENST00000558093 CR1P17927 2039 aa1.42□□□□□ -2.18
SPG11-206ENST00000558093 MYOM1P52179 1685 aa1.42□□□□□ -2.18
SPG11-206ENST00000558093 LOC285556D6RIA3 1793 aa1.42□□□□□ -2.18
SPG11-206ENST00000558093 COL14A1Q05707 1796 aaKnown RBP1.42□□□□□ -2.18
SPG11-206ENST00000558093 ANKRD36CQ5JPF3 1778 aa1.42□□□□□ -2.18
SPG11-206ENST00000558093 HMGXB3Q12766 1538 aa1.41□□□□□ -2.18
SPG11-206ENST00000558093 NEXMIFQ5QGS0 1516 aa1.41□□□□□ -2.18
SPG11-206ENST00000558093 CLASP1Q7Z460 1538 aa1.41□□□□□ -2.18
SPG11-206ENST00000558093 SYCP2Q9BX26 1530 aa1.41□□□□□ -2.18
SPG11-206ENST00000558093 MED12Q93074 2177 aa1.41□□□□□ -2.18
SPG11-206ENST00000558093 NRXN2Q9P2S2 1712 aa1.41□□□□□ -2.18
SPG11-206ENST00000558093 IGLV10-54A0A075B6I4 117 aa1.41□□□□□ -2.18
SPG11-206ENST00000558093 TRAV22A0A0B4J277 110 aa1.41□□□□□ -2.18
SPG11-206ENST00000558093 A0A0J9YX75 114 aa1.41□□□□□ -2.18
SPG11-206ENST00000558093 CXorf51AA0A1B0GTR3 108 aa1.41□□□□□ -2.18
SPG11-206ENST00000558093 ODF3BA8MYP8 253 aa1.41□□□□□ -2.18
SPG11-206ENST00000558093 CHKB-CPT1BH3BT56 60 aa1.41□□□□□ -2.18
SPG11-206ENST00000558093 J3QRE1 110 aa1.41□□□□□ -2.18
SPG11-206ENST00000558093 BAALC-AS2P0C853 105 aa1.41□□□□□ -2.18
SPG11-206ENST00000558093 EDDM3BP56851 147 aa1.41□□□□□ -2.18
SPG11-206ENST00000558093 UBE2D3P61077 147 aa1.41□□□□□ -2.18
SPG11-206ENST00000558093 UBE2D2P62837 147 aa1.41□□□□□ -2.18
SPG11-206ENST00000558093 ZNF791Q3KP31 576 aaPredicted RBP1.41□□□□□ -2.18
SPG11-206ENST00000558093 C10orf128Q5T292 105 aa1.41□□□□□ -2.18
SPG11-206ENST00000558093 Q5VV11 94 aa1.41□□□□□ -2.18
SPG11-206ENST00000558093 HCP5Q6MZN7 132 aa1.41□□□□□ -2.18
SPG11-206ENST00000558093 VMO1Q7Z5L0 202 aa1.41□□□□□ -2.18
SPG11-206ENST00000558093 TET1Q8NFU7 2136 aa1.41□□□□□ -2.18
SPG11-206ENST00000558093 IFI27L1Q96BM0 104 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms