RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 MOBPQ13875 183 aa0.97□□□□□ -2.25
HIF1A-212ENST00000557538 GUSBP11Q6P575 273 aa0.97□□□□□ -2.25
HIF1A-212ENST00000557538 PFN4Q8NHR9 129 aa0.97□□□□□ -2.25
HIF1A-212ENST00000557538 ZNF355PQ9NSJ1 428 aa0.97□□□□□ -2.25
HIF1A-212ENST00000557538 COL6A3P12111 3177 aa0.97□□□□□ -2.25
HIF1A-212ENST00000557538 DSCAML1Q8TD84 2053 aa0.97□□□□□ -2.25
HIF1A-212ENST00000557538 IGKV2D-24A0A075B6R9 120 aa0.96□□□□□ -2.25
HIF1A-212ENST00000557538 LOC101927531A0A1B0GV80 90 aa0.96□□□□□ -2.25
HIF1A-212ENST00000557538 IQCF6A8MYZ5 107 aa0.96□□□□□ -2.25
HIF1A-212ENST00000557538 PIN1P1O15428 100 aa0.96□□□□□ -2.25
HIF1A-212ENST00000557538 PIRTP0C851 137 aa0.96□□□□□ -2.25
HIF1A-212ENST00000557538 COX6B1P14854 86 aa0.96□□□□□ -2.25
HIF1A-212ENST00000557538 KRTAP10-8P60410 259 aa0.96□□□□□ -2.25
HIF1A-212ENST00000557538 ZNF56Q15929 161 aa0.96□□□□□ -2.25
HIF1A-212ENST00000557538 KRTAP13-2Q52LG2 175 aa0.96□□□□□ -2.25
HIF1A-212ENST00000557538 Q6JHZ5 121 aa0.96□□□□□ -2.25
HIF1A-212ENST00000557538 BAGE3Q86Y29 109 aa0.96□□□□□ -2.25
HIF1A-212ENST00000557538 BAGE2Q86Y30 109 aa0.96□□□□□ -2.25
HIF1A-212ENST00000557538 KLF14Q8TD94 323 aaPredicted RBP0.96□□□□□ -2.25
HIF1A-212ENST00000557538 LINC00167Q96N53 147 aa0.96□□□□□ -2.25
HIF1A-212ENST00000557538 TMEM243Q9BU79 118 aa0.96□□□□□ -2.25
HIF1A-212ENST00000557538 CDC42SE2Q9NRR3 84 aa0.96□□□□□ -2.25
HIF1A-212ENST00000557538 TAS2R4Q9NYW5 299 aa0.96□□□□□ -2.25
HIF1A-212ENST00000557538 S4R3C0 116 aa0.96□□□□□ -2.25
HIF1A-212ENST00000557538 DOCK9Q9BZ29 2069 aa0.96□□□□□ -2.25
HIF1A-212ENST00000557538 IGHV7-4-1A0A0J9YVY3 117 aa0.96□□□□□ -2.26
HIF1A-212ENST00000557538 RNASE2P10153 161 aaKnown RBP0.96□□□□□ -2.26
HIF1A-212ENST00000557538 RPL27AP46776 148 aaKnown RBP0.96□□□□□ -2.26
HIF1A-212ENST00000557538 KRTAP26-1Q6PEX3 210 aa0.96□□□□□ -2.26
HIF1A-212ENST00000557538 Q8N814 137 aa0.96□□□□□ -2.26
HIF1A-212ENST00000557538 DAND5Q8N907 189 aa0.96□□□□□ -2.26
HIF1A-212ENST00000557538 GTF3C1Q12789 2109 aa0.96□□□□□ -2.26
HIF1A-212ENST00000557538 TRBV10-3A0A0K0K1G6 114 aa0.96□□□□□ -2.26
HIF1A-212ENST00000557538 TMEM223A0PJW6 202 aa0.96□□□□□ -2.26
HIF1A-212ENST00000557538 IGHV3-11P01762 117 aa0.96□□□□□ -2.26
HIF1A-212ENST00000557538 ZNF32P17041 273 aa0.96□□□□□ -2.26
HIF1A-212ENST00000557538 FUSP35637 526 aaKnown RBP eCLIP0.96□□□□□ -2.26
HIF1A-212ENST00000557538 DYNAPQ8N1N2 210 aa0.96□□□□□ -2.26
HIF1A-212ENST00000557538 TMEM105Q8N8V8 129 aa0.96□□□□□ -2.26
HIF1A-212ENST00000557538 RNF5Q99942 180 aa0.96□□□□□ -2.26
HIF1A-212ENST00000557538 CDC42SE1Q9NRR8 79 aa0.96□□□□□ -2.26
HIF1A-212ENST00000557538 NHP2Q9NX24 153 aaKnown RBP0.96□□□□□ -2.26
HIF1A-212ENST00000557538 PTPN13Q12923 2485 aa0.96□□□□□ -2.26
HIF1A-212ENST00000557538 COL5A1P20908 1838 aaPredicted RBP0.96□□□□□ -2.26
HIF1A-212ENST00000557538 GOLGB1Q14789 3259 aaKnown RBP0.96□□□□□ -2.26
HIF1A-212ENST00000557538 PCNX2A6NKB5 2137 aa0.96□□□□□ -2.26
HIF1A-212ENST00000557538 IGKV2-28A0A075B6P5 120 aa0.95□□□□□ -2.26
HIF1A-212ENST00000557538 IGHV3-43A0A0B4J1X8 118 aa0.95□□□□□ -2.26
HIF1A-212ENST00000557538 CLPSL1A2RUU4 121 aa0.95□□□□□ -2.26
HIF1A-212ENST00000557538 H3BMM0 161 aa0.95□□□□□ -2.26
HIF1A-212ENST00000557538 IGKV2D-28P01615 120 aa0.95□□□□□ -2.26
HIF1A-212ENST00000557538 HMGN2P05204 90 aaKnown RBP0.95□□□□□ -2.26
HIF1A-212ENST00000557538 SAA1P0DJI8 122 aaPredicted RBP0.95□□□□□ -2.26
HIF1A-212ENST00000557538 PSMB2P49721 201 aa0.95□□□□□ -2.26
HIF1A-212ENST00000557538 RBMY1FQ15415 496 aaKnown RBP0.95□□□□□ -2.26
HIF1A-212ENST00000557538 Q8IYB0 196 aa0.95□□□□□ -2.26
HIF1A-212ENST00000557538 LYPD1Q8N2G4 141 aa0.95□□□□□ -2.26
HIF1A-212ENST00000557538 UBE2WQ96B02 151 aa0.95□□□□□ -2.26
HIF1A-212ENST00000557538 DEC1Q9P2X7 70 aa0.95□□□□□ -2.26
HIF1A-212ENST00000557538 U3KQK5 164 aa0.95□□□□□ -2.26
HIF1A-212ENST00000557538 KIAA2026Q5HYC2 2103 aa0.95□□□□□ -2.26
HIF1A-212ENST00000557538 A0A0B4J2C4 111 aa0.95□□□□□ -2.26
HIF1A-212ENST00000557538 TRBV30A0A0K0K1B3 111 aa0.95□□□□□ -2.26
HIF1A-212ENST00000557538 CXorf51AA0A1B0GTR3 108 aa0.95□□□□□ -2.26
HIF1A-212ENST00000557538 C5orf67F2Z3F1 127 aa0.95□□□□□ -2.26
HIF1A-212ENST00000557538 COX7A2P2O60397 106 aa0.95□□□□□ -2.26
HIF1A-212ENST00000557538 IGKV1D-33P01593 117 aa0.95□□□□□ -2.26
HIF1A-212ENST00000557538 IGKV1-33P01594 117 aa0.95□□□□□ -2.26
HIF1A-212ENST00000557538 IGKV3-11P04433 115 aa0.95□□□□□ -2.26
HIF1A-212ENST00000557538 LINC00315P59091 139 aa0.95□□□□□ -2.26
HIF1A-212ENST00000557538 REG3AQ06141 175 aa0.95□□□□□ -2.26
HIF1A-212ENST00000557538 CIRBPQ14011 172 aaKnown RBP0.95□□□□□ -2.26
HIF1A-212ENST00000557538 MRPL51Q4U2R6 128 aaKnown RBP0.95□□□□□ -2.26
HIF1A-212ENST00000557538 RNASE13Q5GAN3 156 aaKnown RBP0.95□□□□□ -2.26
HIF1A-212ENST00000557538 SCXQ7RTU7 201 aa0.95□□□□□ -2.26
HIF1A-212ENST00000557538 FAM216BQ8N7L0 139 aa0.95□□□□□ -2.26
HIF1A-212ENST00000557538 ST20-AS1Q8NBB2 130 aa0.95□□□□□ -2.26
HIF1A-212ENST00000557538 TMEM263Q8WUH6 116 aaKnown RBP0.95□□□□□ -2.26
HIF1A-212ENST00000557538 Q96M85 177 aa0.95□□□□□ -2.26
HIF1A-212ENST00000557538 AMELXQ99217 191 aa0.95□□□□□ -2.26
HIF1A-212ENST00000557538 SMIM7Q9BQ49 75 aa0.95□□□□□ -2.26
HIF1A-212ENST00000557538 TIMM21Q9BVV7 248 aa0.95□□□□□ -2.26
HIF1A-212ENST00000557538 NPCDR1Q9BY65 106 aa0.95□□□□□ -2.26
HIF1A-212ENST00000557538 CYP4F30PQ9H0H9 118 aa0.95□□□□□ -2.26
HIF1A-212ENST00000557538 ARL2-SNX15V9GYD0 113 aa0.95□□□□□ -2.26
HIF1A-212ENST00000557538 A0A0C4DFX4 3053 aa0.95□□□□□ -2.26
HIF1A-212ENST00000557538 BSNQ9UPA5 3926 aa0.95□□□□□ -2.26
HIF1A-212ENST00000557538 TRAV7A0A075B6U4 112 aa0.95□□□□□ -2.26
HIF1A-212ENST00000557538 A0A087WSZ3 146 aa0.95□□□□□ -2.26
HIF1A-212ENST00000557538 SDHAF1A6NFY7 115 aa0.95□□□□□ -2.26
HIF1A-212ENST00000557538 K7EMI3 77 aa0.95□□□□□ -2.26
HIF1A-212ENST00000557538 LEPROTO15243 131 aa0.95□□□□□ -2.26
HIF1A-212ENST00000557538 PCBD1P61457 104 aa0.95□□□□□ -2.26
HIF1A-212ENST00000557538 DYNLT1P63172 113 aa0.95□□□□□ -2.26
HIF1A-212ENST00000557538 RBM3P98179 157 aaKnown RBP0.95□□□□□ -2.26
HIF1A-212ENST00000557538 SOSTDC1Q6X4U4 206 aa0.95□□□□□ -2.26
HIF1A-212ENST00000557538 NDUFA12Q9UI09 145 aa0.95□□□□□ -2.26
HIF1A-212ENST00000557538 BAHCC1Q9P281 2608 aa0.94□□□□□ -2.26
HIF1A-212ENST00000557538 TMEM30CPA0ZSE6 113 aa0.94□□□□□ -2.26
HIF1A-212ENST00000557538 PSCAO43653 123 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms