RNA–Protein interactions for RNA: ENST00000557394.5

SUPT16H-207, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 2,324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-207ENST00000557394 SMCR5Q8TEV8 140 aa7.78□□□□□ -1.16
SUPT16H-207ENST00000557394 CLEC2BQ92478 149 aa7.78□□□□□ -1.16
SUPT16H-207ENST00000557394 DPM3Q9P2X0 92 aa7.78□□□□□ -1.16
SUPT16H-207ENST00000557394 A0A0A0MQY5 61 aa7.78□□□□□ -1.16
SUPT16H-207ENST00000557394 TRBV27A0A0K0K1C4 114 aa7.78□□□□□ -1.16
SUPT16H-207ENST00000557394 CXCL5P42830 114 aa7.78□□□□□ -1.16
SUPT16H-207ENST00000557394 DCANP1Q8TF63 244 aa7.78□□□□□ -1.16
SUPT16H-207ENST00000557394 ITLN2Q8WWU7 325 aaPredicted RBP7.78□□□□□ -1.16
SUPT16H-207ENST00000557394 RNASE6Q93091 150 aaKnown RBP7.78□□□□□ -1.16
SUPT16H-207ENST00000557394 TPRP12270 2363 aaKnown RBP7.77□□□□□ -1.17
SUPT16H-207ENST00000557394 IGHV3-66A0A0C4DH42 116 aa7.77□□□□□ -1.17
SUPT16H-207ENST00000557394 TRBV6-5A0A0K0K1A5 114 aa7.77□□□□□ -1.17
SUPT16H-207ENST00000557394 LINC00527Q9UJ94 153 aa7.77□□□□□ -1.17
SUPT16H-207ENST00000557394 I3L3M4 83 aa7.77□□□□□ -1.17
SUPT16H-207ENST00000557394 PAX4O43316 350 aa7.77□□□□□ -1.17
SUPT16H-207ENST00000557394 SAA4P35542 130 aa7.76□□□□□ -1.17
SUPT16H-207ENST00000557394 HIST1H4AP62805 103 aaKnown RBP7.76□□□□□ -1.17
SUPT16H-207ENST00000557394 NSUN5P1Q3KNT7 163 aa7.76□□□□□ -1.17
SUPT16H-207ENST00000557394 SUMO4Q6EEV6 95 aa7.76□□□□□ -1.17
SUPT16H-207ENST00000557394 ZNF256Q9Y2P7 627 aaPredicted RBP7.76□□□□□ -1.17
SUPT16H-207ENST00000557394 ZZEF1O43149 2961 aa7.76□□□□□ -1.17
SUPT16H-207ENST00000557394 RHOHQ15669 191 aa7.75□□□□□ -1.17
SUPT16H-207ENST00000557394 Q8N6K4 173 aa7.75□□□□□ -1.17
SUPT16H-207ENST00000557394 USP24Q9UPU5 2620 aa7.75□□□□□ -1.17
SUPT16H-207ENST00000557394 ITPR1Q14643 2758 aa7.75□□□□□ -1.17
SUPT16H-207ENST00000557394 SPTA1P02549 2419 aa7.75□□□□□ -1.17
SUPT16H-207ENST00000557394 MIAQ16674 131 aa7.75□□□□□ -1.17
SUPT16H-207ENST00000557394 TMEM61Q8N0U2 210 aa7.75□□□□□ -1.17
SUPT16H-207ENST00000557394 LY6G5BQ8NDX9 201 aa7.75□□□□□ -1.17
SUPT16H-207ENST00000557394 Q9H8V8 135 aa7.75□□□□□ -1.17
SUPT16H-207ENST00000557394 ZNF580Q9UK33 172 aa7.75□□□□□ -1.17
SUPT16H-207ENST00000557394 ATRXP46100 2492 aa7.74□□□□□ -1.17
SUPT16H-207ENST00000557394 IGHV3-64A0A075B6Q5 118 aa7.74□□□□□ -1.17
SUPT16H-207ENST00000557394 GNRH2O43555 120 aa7.74□□□□□ -1.17
SUPT16H-207ENST00000557394 IGHV3-30-3P0DP02 117 aa7.74□□□□□ -1.17
SUPT16H-207ENST00000557394 BSPH1Q075Z2 132 aa7.74□□□□□ -1.17
SUPT16H-207ENST00000557394 C15orf32Q32M92 178 aa7.74□□□□□ -1.17
SUPT16H-207ENST00000557394 ADAMTSL4-AS1Q5T5F5 129 aa7.74□□□□□ -1.17
SUPT16H-207ENST00000557394 RBM12B-AS1Q9P1G2 102 aa7.74□□□□□ -1.17
SUPT16H-207ENST00000557394 PRRC2CQ9Y520 2896 aaKnown RBP7.74□□□□□ -1.17
SUPT16H-207ENST00000557394 IGHV7-81A0A0B4J1V7 117 aa7.74□□□□□ -1.17
SUPT16H-207ENST00000557394 RNASE4P34096 147 aaKnown RBP7.74□□□□□ -1.17
SUPT16H-207ENST00000557394 RPL11P62913 178 aaKnown RBP7.74□□□□□ -1.17
SUPT16H-207ENST00000557394 C10orf105Q8TEF2 133 aa7.74□□□□□ -1.17
SUPT16H-207ENST00000557394 OPRPNQ99935 248 aaPredicted RBP7.74□□□□□ -1.17
SUPT16H-207ENST00000557394 IGHV3OR16-13A0A075B7E8 117 aa7.73□□□□□ -1.17
SUPT16H-207ENST00000557394 IGHV3-74A0A0B4J1X5 117 aa7.73□□□□□ -1.17
SUPT16H-207ENST00000557394 ODF3BA8MYP8 253 aa7.73□□□□□ -1.17
SUPT16H-207ENST00000557394 Q6ZSV7 163 aa7.73□□□□□ -1.17
SUPT16H-207ENST00000557394 VMO1Q7Z5L0 202 aa7.73□□□□□ -1.17
SUPT16H-207ENST00000557394 TRAV8-3A0A0A6YYJ7 113 aa7.73□□□□□ -1.17
SUPT16H-207ENST00000557394 A0A0J9YXV3 536 aa7.73□□□□□ -1.17
SUPT16H-207ENST00000557394 KNCNA6PVL3 124 aa7.73□□□□□ -1.17
SUPT16H-207ENST00000557394 PSMB8P28062 276 aa7.73□□□□□ -1.17
SUPT16H-207ENST00000557394 DEFB104AQ8WTQ1 72 aa7.73□□□□□ -1.17
SUPT16H-207ENST00000557394 ATMQ13315 3056 aa7.72□□□□□ -1.17
SUPT16H-207ENST00000557394 PRSS2P07478 247 aa7.72□□□□□ -1.17
SUPT16H-207ENST00000557394 TIMM21Q9BVV7 248 aa7.72□□□□□ -1.17
SUPT16H-207ENST00000557394 DYNLRB1Q9NP97 96 aa7.72□□□□□ -1.17
SUPT16H-207ENST00000557394 IGLV4-3A0A075B6K6 122 aa7.72□□□□□ -1.17
SUPT16H-207ENST00000557394 IGHV3-49A0A0A0MS15 119 aa7.72□□□□□ -1.17
SUPT16H-207ENST00000557394 ATOX1O00244 68 aa7.72□□□□□ -1.17
SUPT16H-207ENST00000557394 Q6ZRU5 148 aa7.71□□□□□ -1.18
SUPT16H-207ENST00000557394 C20orf203Q8NBC4 194 aa7.71□□□□□ -1.18
SUPT16H-207ENST00000557394 SPATA3Q8NHX4 192 aa7.71□□□□□ -1.18
SUPT16H-207ENST00000557394 C16orf95Q9H693 158 aa7.71□□□□□ -1.18
SUPT16H-207ENST00000557394 RP1L1Q8IWN7 2480 aaPredicted RBP7.71□□□□□ -1.18
SUPT16H-207ENST00000557394 MUC4Q99102 2169 aa7.71□□□□□ -1.18
SUPT16H-207ENST00000557394 IGHV1-58A0A0C4DH39 117 aa7.7□□□□□ -1.18
SUPT16H-207ENST00000557394 ADARB2-AS1A8MUL3 147 aa7.7□□□□□ -1.18
SUPT16H-207ENST00000557394 SOCS3O14543 225 aa7.7□□□□□ -1.18
SUPT16H-207ENST00000557394 TIMM17BO60830 172 aa7.7□□□□□ -1.18
SUPT16H-207ENST00000557394 MRPS36P82909 103 aaKnown RBP7.7□□□□□ -1.18
SUPT16H-207ENST00000557394 DAND5Q8N907 189 aa7.7□□□□□ -1.18
SUPT16H-207ENST00000557394 TRBV7-1A0A0A6YYK4 115 aa7.7□□□□□ -1.18
SUPT16H-207ENST00000557394 CCL21O00585 134 aa7.7□□□□□ -1.18
SUPT16H-207ENST00000557394 CLEC19AQ6UXS0 136 aa7.7□□□□□ -1.18
SUPT16H-207ENST00000557394 NDUFA12Q9UI09 145 aa7.7□□□□□ -1.18
SUPT16H-207ENST00000557394 POLEQ07864 2286 aa7.7□□□□□ -1.18
SUPT16H-207ENST00000557394 Q8N9W7 124 aa7.69□□□□□ -1.18
SUPT16H-207ENST00000557394 BOD1L1Q8NFC6 3051 aa7.69□□□□□ -1.18
SUPT16H-207ENST00000557394 LAMA5O15230 3695 aa7.69□□□□□ -1.18
SUPT16H-207ENST00000557394 ARHGAP32A7KAX9 2087 aa7.69□□□□□ -1.18
SUPT16H-207ENST00000557394 C8orf87E5RJ46 101 aa7.69□□□□□ -1.18
SUPT16H-207ENST00000557394 E7EQL1 145 aa7.69□□□□□ -1.18
SUPT16H-207ENST00000557394 COX7A2LO14548 114 aa7.69□□□□□ -1.18
SUPT16H-207ENST00000557394 BEAN1Q3B7T3 259 aa7.69□□□□□ -1.18
SUPT16H-207ENST00000557394 CACNA1BQ00975 2339 aa7.69□□□□□ -1.18
SUPT16H-207ENST00000557394 IGSF10Q6WRI0 2623 aa7.68□□□□□ -1.18
SUPT16H-207ENST00000557394 COL6A6A6NMZ7 2263 aa7.68□□□□□ -1.18
SUPT16H-207ENST00000557394 hADV29S1A0JD25 119 aa7.68□□□□□ -1.18
SUPT16H-207ENST00000557394 M0QY20 66 aa7.68□□□□□ -1.18
SUPT16H-207ENST00000557394 CYSTM1Q9H1C7 97 aa7.68□□□□□ -1.18
SUPT16H-207ENST00000557394 C22orf24Q9Y442 160 aa7.68□□□□□ -1.18
SUPT16H-207ENST00000557394 KALRNO60229 2985 aa7.68□□□□□ -1.18
SUPT16H-207ENST00000557394 TRAV41A0A0B4J266 112 aa7.68□□□□□ -1.18
SUPT16H-207ENST00000557394 PLAC8L1A1L4L8 177 aa7.68□□□□□ -1.18
SUPT16H-207ENST00000557394 F5H697 171 aa7.68□□□□□ -1.18
SUPT16H-207ENST00000557394 LYNX1G3V0Z9 82 aa7.68□□□□□ -1.18
SUPT16H-207ENST00000557394 M0R1W7 72 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms