RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 RAB2AP61019 212 aa2.06□□□□□ -2.08
CHD8-212ENST00000557329 REG3AQ06141 175 aa2.06□□□□□ -2.08
CHD8-212ENST00000557329 EIF5AL1Q6IS14 154 aaKnown RBP2.06□□□□□ -2.08
CHD8-212ENST00000557329 PHF5AQ7RTV0 110 aaKnown RBP2.06□□□□□ -2.08
CHD8-212ENST00000557329 LHFPL1Q86WI0 220 aa2.06□□□□□ -2.08
CHD8-212ENST00000557329 PACRGLQ8N7B6 248 aa2.06□□□□□ -2.08
CHD8-212ENST00000557329 CMTM2Q8TAZ6 248 aa2.06□□□□□ -2.08
CHD8-212ENST00000557329 LINC00526Q96FQ7 95 aa2.06□□□□□ -2.08
CHD8-212ENST00000557329 CNBD2Q96M20 576 aa2.06□□□□□ -2.08
CHD8-212ENST00000557329 CHCHD7Q9BUK0 85 aa2.06□□□□□ -2.08
CHD8-212ENST00000557329 TREM1Q9NP99 234 aa2.06□□□□□ -2.08
CHD8-212ENST00000557329 MCUBQ9NWR8 336 aa2.06□□□□□ -2.08
CHD8-212ENST00000557329 SHPKQ9UHJ6 478 aa2.06□□□□□ -2.08
CHD8-212ENST00000557329 ANAPC10Q9UM13 185 aa2.06□□□□□ -2.08
CHD8-212ENST00000557329 PHLDA3Q9Y5J5 127 aa2.06□□□□□ -2.08
CHD8-212ENST00000557329 A8MWV9 139 aa2.05□□□□□ -2.08
CHD8-212ENST00000557329 HPGDSO60760 199 aa2.05□□□□□ -2.08
CHD8-212ENST00000557329 IGLV7-43P04211 117 aa2.05□□□□□ -2.08
CHD8-212ENST00000557329 NBEAP1P0C6P0 100 aa2.05□□□□□ -2.08
CHD8-212ENST00000557329 TGFBR1P36897 503 aa2.05□□□□□ -2.08
CHD8-212ENST00000557329 DEFA3P59666 94 aa2.05□□□□□ -2.08
CHD8-212ENST00000557329 RBX1P62877 108 aa2.05□□□□□ -2.08
CHD8-212ENST00000557329 BAXQ07812 192 aa2.05□□□□□ -2.08
CHD8-212ENST00000557329 LINC00483Q53H64 154 aa2.05□□□□□ -2.08
CHD8-212ENST00000557329 Q6AWC8 147 aa2.05□□□□□ -2.08
CHD8-212ENST00000557329 LINC00173Q6ZV60 143 aa2.05□□□□□ -2.08
CHD8-212ENST00000557329 CLVS1Q8IUQ0 354 aaPredicted RBP2.05□□□□□ -2.08
CHD8-212ENST00000557329 DYNC2LI1Q8TCX1 351 aa2.05□□□□□ -2.08
CHD8-212ENST00000557329 PFDN5Q99471 154 aa2.05□□□□□ -2.08
CHD8-212ENST00000557329 NDFIP1Q9BT67 221 aa2.05□□□□□ -2.08
CHD8-212ENST00000557329 DERL1Q9BUN8 251 aa2.05□□□□□ -2.08
CHD8-212ENST00000557329 GSKIPQ9P0R6 139 aa2.05□□□□□ -2.08
CHD8-212ENST00000557329 BLOC1S6Q9UL45 172 aa2.05□□□□□ -2.08
CHD8-212ENST00000557329 SYNE2Q8WXH0 6885 aaKnown RBP2.04□□□□□ -2.08
CHD8-212ENST00000557329 TRBV7-3A0A075B6L6 115 aa2.04□□□□□ -2.08
CHD8-212ENST00000557329 TRBV25-1A0A075B6N4 114 aa2.04□□□□□ -2.08
CHD8-212ENST00000557329 A0A1W2PNN7 141 aa2.04□□□□□ -2.08
CHD8-212ENST00000557329 FAM24AA6NFZ4 105 aa2.04□□□□□ -2.08
CHD8-212ENST00000557329 L7N2F9 121 aa2.04□□□□□ -2.08
CHD8-212ENST00000557329 M0R381 172 aa2.04□□□□□ -2.08
CHD8-212ENST00000557329 UBE2L6O14933 153 aa2.04□□□□□ -2.08
CHD8-212ENST00000557329 OR7C2O60412 319 aa2.04□□□□□ -2.08
CHD8-212ENST00000557329 CXCL5P42830 114 aa2.04□□□□□ -2.08
CHD8-212ENST00000557329 PKIAP61925 76 aa2.04□□□□□ -2.08
CHD8-212ENST00000557329 UBE2BP63146 152 aa2.04□□□□□ -2.08
CHD8-212ENST00000557329 RPL18AQ02543 176 aaKnown RBP2.04□□□□□ -2.08
CHD8-212ENST00000557329 KIAA0087Q14695 138 aa2.04□□□□□ -2.08
CHD8-212ENST00000557329 SPCS2Q15005 226 aa2.04□□□□□ -2.08
CHD8-212ENST00000557329 ZNF56Q15929 161 aa2.04□□□□□ -2.08
CHD8-212ENST00000557329 GOLT1AQ6ZVE7 132 aa2.04□□□□□ -2.08
CHD8-212ENST00000557329 TMEM229BQ8NBD8 167 aa2.04□□□□□ -2.08
CHD8-212ENST00000557329 SCGB3A2Q96PL1 93 aa2.04□□□□□ -2.08
CHD8-212ENST00000557329 MGST2Q99735 147 aa2.04□□□□□ -2.08
CHD8-212ENST00000557329 EXTL2Q9UBQ6 330 aa2.04□□□□□ -2.08
CHD8-212ENST00000557329 SCP2D1Q9UJQ7 156 aa2.04□□□□□ -2.08
CHD8-212ENST00000557329 MUC17Q685J3 4493 aa2.04□□□□□ -2.08
CHD8-212ENST00000557329 TMSB15BA0A087X1C1 80 aa2.03□□□□□ -2.08
CHD8-212ENST00000557329 TRAV8-4A0A0B4J246 113 aa2.03□□□□□ -2.08
CHD8-212ENST00000557329 PIGBOS1A0A0B4J2F0 54 aa2.03□□□□□ -2.08
CHD8-212ENST00000557329 UBE2L5PA0A1B0GUS4 154 aa2.03□□□□□ -2.08
CHD8-212ENST00000557329 GRIFINA4D1Z8 144 aa2.03□□□□□ -2.08
CHD8-212ENST00000557329 H3BVH4 76 aa2.03□□□□□ -2.08
CHD8-212ENST00000557329 CST7O76096 145 aa2.03□□□□□ -2.08
CHD8-212ENST00000557329 GCGP01275 180 aa2.03□□□□□ -2.08
CHD8-212ENST00000557329 P01737 135 aa2.03□□□□□ -2.08
CHD8-212ENST00000557329 AKAIN1P0CW23 69 aa2.03□□□□□ -2.08
CHD8-212ENST00000557329 GZMBP10144 247 aa2.03□□□□□ -2.08
CHD8-212ENST00000557329 GABARAPL2P60520 117 aa2.03□□□□□ -2.08
CHD8-212ENST00000557329 PDE6HQ13956 83 aa2.03□□□□□ -2.08
CHD8-212ENST00000557329 NEDD8Q15843 81 aa2.03□□□□□ -2.08
CHD8-212ENST00000557329 C9orf116Q5BN46 136 aaPredicted RBP2.03□□□□□ -2.08
CHD8-212ENST00000557329 GCSAMLQ5JQS6 135 aa2.03□□□□□ -2.08
CHD8-212ENST00000557329 FAM74A1Q5RGS3 127 aa2.03□□□□□ -2.08
CHD8-212ENST00000557329 MIR17HGQ75NE6 70 aa2.03□□□□□ -2.08
CHD8-212ENST00000557329 DIRAS2Q96HU8 199 aa2.03□□□□□ -2.08
CHD8-212ENST00000557329 CARD19Q96LW7 228 aa2.03□□□□□ -2.08
CHD8-212ENST00000557329 PRRT1Q99946 306 aa2.03□□□□□ -2.08
CHD8-212ENST00000557329 SLC25A2Q9BXI2 301 aa2.03□□□□□ -2.08
CHD8-212ENST00000557329 MTFP1Q9UDX5 166 aa2.03□□□□□ -2.08
CHD8-212ENST00000557329 PKIGQ9Y2B9 76 aa2.03□□□□□ -2.08
CHD8-212ENST00000557329 MUC19Q7Z5P9 8384 aa2.02□□□□□ -2.09
CHD8-212ENST00000557329 RBAKDNA6NC62 111 aa2.02□□□□□ -2.09
CHD8-212ENST00000557329 M0R036 132 aa2.02□□□□□ -2.09
CHD8-212ENST00000557329 RGS5O15539 181 aa2.02□□□□□ -2.09
CHD8-212ENST00000557329 APOA1P02647 267 aa2.02□□□□□ -2.09
CHD8-212ENST00000557329 LINC00694P0DN24 101 aa2.02□□□□□ -2.09
CHD8-212ENST00000557329 BCL2P10415 239 aa2.02□□□□□ -2.09
CHD8-212ENST00000557329 FGF7P21781 194 aa2.02□□□□□ -2.09
CHD8-212ENST00000557329 AQP4P55087 323 aa2.02□□□□□ -2.09
CHD8-212ENST00000557329 UBE2D3P61077 147 aa2.02□□□□□ -2.09
CHD8-212ENST00000557329 UBE2D2P62837 147 aa2.02□□□□□ -2.09
CHD8-212ENST00000557329 GNG5P63218 68 aa2.02□□□□□ -2.09
CHD8-212ENST00000557329 UBE2L3P68036 154 aaKnown RBP2.02□□□□□ -2.09
CHD8-212ENST00000557329 SPANXN2Q5MJ10 180 aa2.02□□□□□ -2.09
CHD8-212ENST00000557329 KRTAP26-1Q6PEX3 210 aa2.02□□□□□ -2.09
CHD8-212ENST00000557329 PRNTQ86SH4 94 aa2.02□□□□□ -2.09
CHD8-212ENST00000557329 C15orf56Q8N910 161 aa2.02□□□□□ -2.09
CHD8-212ENST00000557329 SMIM8Q96KF7 97 aa2.02□□□□□ -2.09
CHD8-212ENST00000557329 TPPP3Q9BW30 176 aa2.02□□□□□ -2.09
CHD8-212ENST00000557329 SLIRPQ9GZT3 109 aaKnown RBP2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 263.9 ms