RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 LINC00337Q8N6G1 96 aa3.38□□□□□ -1.87
ATXN3-245ENST00000556958 C14orf178Q8N769 122 aaPredicted RBP3.38□□□□□ -1.87
ATXN3-245ENST00000556958 URB1-AS1Q96HZ7 61 aa3.38□□□□□ -1.87
ATXN3-245ENST00000556958 KCNIP2Q9NS61 270 aa3.38□□□□□ -1.87
ATXN3-245ENST00000556958 Q9UF83 564 aa3.38□□□□□ -1.87
ATXN3-245ENST00000556958 PAM16Q9Y3D7 125 aa3.38□□□□□ -1.87
ATXN3-245ENST00000556958 FCGBPQ9Y6R7 5405 aaPredicted RBP3.38□□□□□ -1.87
ATXN3-245ENST00000556958 TRBV10-1A0A0K0K1A3 114 aa3.37□□□□□ -1.87
ATXN3-245ENST00000556958 NBEAP1P0C6P0 100 aa3.37□□□□□ -1.87
ATXN3-245ENST00000556958 KRTAP5-9P26371 169 aa3.37□□□□□ -1.87
ATXN3-245ENST00000556958 RBX1P62877 108 aa3.37□□□□□ -1.87
ATXN3-245ENST00000556958 REG3AQ06141 175 aa3.37□□□□□ -1.87
ATXN3-245ENST00000556958 ZNF674Q2M3X9 581 aa3.37□□□□□ -1.87
ATXN3-245ENST00000556958 LGALSLQ3ZCW2 172 aaPredicted RBP3.37□□□□□ -1.87
ATXN3-245ENST00000556958 TMEM97Q5BJF2 176 aa3.37□□□□□ -1.87
ATXN3-245ENST00000556958 SLC51BQ86UW2 128 aa3.37□□□□□ -1.87
ATXN3-245ENST00000556958 TMED6Q8WW62 240 aa3.37□□□□□ -1.87
ATXN3-245ENST00000556958 SLC25A2Q9BXI2 301 aa3.37□□□□□ -1.87
ATXN3-245ENST00000556958 GFRA4Q9GZZ7 299 aa3.37□□□□□ -1.87
ATXN3-245ENST00000556958 SYNE2Q8WXH0 6885 aaKnown RBP3.37□□□□□ -1.87
ATXN3-245ENST00000556958 USH2AO75445 5202 aa3.37□□□□□ -1.87
ATXN3-245ENST00000556958 TRBV7-3A0A075B6L6 115 aa3.36□□□□□ -1.87
ATXN3-245ENST00000556958 ATP6V0CP27449 155 aa3.36□□□□□ -1.87
ATXN3-245ENST00000556958 AMTP48728 403 aa3.36□□□□□ -1.87
ATXN3-245ENST00000556958 TAS2R45P59539 299 aa3.36□□□□□ -1.87
ATXN3-245ENST00000556958 UBE2D3P61077 147 aa3.36□□□□□ -1.87
ATXN3-245ENST00000556958 UBE2D2P62837 147 aa3.36□□□□□ -1.87
ATXN3-245ENST00000556958 UBE2L3P68036 154 aaKnown RBP3.36□□□□□ -1.87
ATXN3-245ENST00000556958 MT1HP80294 61 aa3.36□□□□□ -1.87
ATXN3-245ENST00000556958 KHDC3LQ587J8 217 aa3.36□□□□□ -1.87
ATXN3-245ENST00000556958 AKR1C8PQ5T2L2 129 aa3.36□□□□□ -1.87
ATXN3-245ENST00000556958 RPL7L1Q6DKI1 246 aaKnown RBP3.36□□□□□ -1.87
ATXN3-245ENST00000556958 CMTM2Q8TAZ6 248 aa3.36□□□□□ -1.87
ATXN3-245ENST00000556958 TSKUQ8WUA8 353 aa3.36□□□□□ -1.87
ATXN3-245ENST00000556958 PHYHIPLQ96FC7 376 aa3.36□□□□□ -1.87
ATXN3-245ENST00000556958 ACTR3CQ9C0K3 210 aaPredicted RBP3.36□□□□□ -1.87
ATXN3-245ENST00000556958 A0A087WZ39 114 aa3.35□□□□□ -1.87
ATXN3-245ENST00000556958 A0A1B0GV50 99 aa3.35□□□□□ -1.87
ATXN3-245ENST00000556958 LOC105371267A0A1B0GV96 52 aa3.35□□□□□ -1.87
ATXN3-245ENST00000556958 KANTRA0A1W2PQU2 76 aa3.35□□□□□ -1.87
ATXN3-245ENST00000556958 M0R2T5 61 aa3.35□□□□□ -1.87
ATXN3-245ENST00000556958 MBP02144 154 aa3.35□□□□□ -1.87
ATXN3-245ENST00000556958 CDC34P49427 236 aaPredicted RBP3.35□□□□□ -1.87
ATXN3-245ENST00000556958 RAB5CP51148 216 aa3.35□□□□□ -1.87
ATXN3-245ENST00000556958 ZNF345Q14585 488 aa3.35□□□□□ -1.87
ATXN3-245ENST00000556958 HIGD2BQ4VC39 106 aa3.35□□□□□ -1.87
ATXN3-245ENST00000556958 FAM74A1Q5RGS3 127 aa3.35□□□□□ -1.87
ATXN3-245ENST00000556958 KRTAP5-4Q6L8H1 288 aa3.35□□□□□ -1.87
ATXN3-245ENST00000556958 UFSP1Q6NVU6 142 aa3.35□□□□□ -1.87
ATXN3-245ENST00000556958 UQCC3Q6UW78 93 aa3.35□□□□□ -1.87
ATXN3-245ENST00000556958 LINC00173Q6ZV60 143 aa3.35□□□□□ -1.87
ATXN3-245ENST00000556958 COMMD7Q86VX2 200 aa3.35□□□□□ -1.87
ATXN3-245ENST00000556958 OR11H4Q8NGC9 324 aa3.35□□□□□ -1.87
ATXN3-245ENST00000556958 AQP10Q96PS8 301 aa3.35□□□□□ -1.87
ATXN3-245ENST00000556958 RETNLBQ9BQ08 111 aa3.35□□□□□ -1.87
ATXN3-245ENST00000556958 ZNF471Q9BX82 626 aaPredicted RBP3.35□□□□□ -1.87
ATXN3-245ENST00000556958 PPDPFQ9H3Y8 114 aa3.35□□□□□ -1.87
ATXN3-245ENST00000556958 TNFSF18Q9UNG2 199 aa3.35□□□□□ -1.87
ATXN3-245ENST00000556958 MACF1Q9UPN3 7388 aaKnown RBP3.35□□□□□ -1.87
ATXN3-245ENST00000556958 TEX46H3BTG2 121 aa3.34□□□□□ -1.87
ATXN3-245ENST00000556958 PAGE4O60829 102 aa3.34□□□□□ -1.87
ATXN3-245ENST00000556958 SCGB1D1O95968 90 aa3.34□□□□□ -1.87
ATXN3-245ENST00000556958 ARL14EPLP0DKL9 152 aa3.34□□□□□ -1.87
ATXN3-245ENST00000556958 S100A4P26447 101 aaKnown RBP3.34□□□□□ -1.87
ATXN3-245ENST00000556958 UBE2G2P60604 165 aa3.34□□□□□ -1.87
ATXN3-245ENST00000556958 CTAG1AP78358 180 aa3.34□□□□□ -1.87
ATXN3-245ENST00000556958 SERF2P84101 59 aa3.34□□□□□ -1.87
ATXN3-245ENST00000556958 PRR27Q6MZM9 219 aa3.34□□□□□ -1.87
ATXN3-245ENST00000556958 TMUB2Q71RG4 321 aa3.34□□□□□ -1.87
ATXN3-245ENST00000556958 C15orf56Q8N910 161 aa3.34□□□□□ -1.87
ATXN3-245ENST00000556958 TYMSOSQ8TAI1 123 aa3.34□□□□□ -1.87
ATXN3-245ENST00000556958 FXYD5Q96DB9 178 aa3.34□□□□□ -1.87
ATXN3-245ENST00000556958 FAM167A-AS1Q96KT0 104 aa3.34□□□□□ -1.87
ATXN3-245ENST00000556958 SGK494Q96LW2 274 aa3.34□□□□□ -1.87
ATXN3-245ENST00000556958 TREM1Q9NP99 234 aa3.34□□□□□ -1.87
ATXN3-245ENST00000556958 PHLDA3Q9Y5J5 127 aa3.34□□□□□ -1.87
ATXN3-245ENST00000556958 A0A1W2PNN7 141 aa3.33□□□□□ -1.88
ATXN3-245ENST00000556958 RAB19A4D1S5 217 aa3.33□□□□□ -1.88
ATXN3-245ENST00000556958 G3V3Q6 166 aa3.33□□□□□ -1.88
ATXN3-245ENST00000556958 K7EQM0 130 aa3.33□□□□□ -1.88
ATXN3-245ENST00000556958 CXorf1O96002 111 aa3.33□□□□□ -1.88
ATXN3-245ENST00000556958 PRSS2P07478 247 aa3.33□□□□□ -1.88
ATXN3-245ENST00000556958 GCHFRP30047 84 aa3.33□□□□□ -1.88
ATXN3-245ENST00000556958 SULT1A2P50226 295 aa3.33□□□□□ -1.88
ATXN3-245ENST00000556958 GNG5P63218 68 aa3.33□□□□□ -1.88
ATXN3-245ENST00000556958 GAGE2BQ13066 116 aa3.33□□□□□ -1.88
ATXN3-245ENST00000556958 GAGE6Q13070 117 aa3.33□□□□□ -1.88
ATXN3-245ENST00000556958 FAM74A4Q5TZK3 123 aa3.33□□□□□ -1.88
ATXN3-245ENST00000556958 CST9LP1Q5W188 147 aa3.33□□□□□ -1.88
ATXN3-245ENST00000556958 EIF5AL1Q6IS14 154 aaKnown RBP3.33□□□□□ -1.88
ATXN3-245ENST00000556958 PQLC2Q6ZP29 291 aa3.33□□□□□ -1.88
ATXN3-245ENST00000556958 GOLT1AQ6ZVE7 132 aa3.33□□□□□ -1.88
ATXN3-245ENST00000556958 KCNRGQ8N5I3 272 aa3.33□□□□□ -1.88
ATXN3-245ENST00000556958 OR10G8Q8NGN5 311 aa3.33□□□□□ -1.88
ATXN3-245ENST00000556958 STOML3Q8TAV4 291 aa3.33□□□□□ -1.88
ATXN3-245ENST00000556958 FAM213BQ8TBF2 198 aa3.33□□□□□ -1.88
ATXN3-245ENST00000556958 SFT2D1Q8WV19 159 aa3.33□□□□□ -1.88
ATXN3-245ENST00000556958 PSMG3Q9BT73 122 aaPredicted RBP3.33□□□□□ -1.88
ATXN3-245ENST00000556958 KRTAP4-1Q9BYQ7 146 aa3.33□□□□□ -1.88
ATXN3-245ENST00000556958 KRTAP4-4Q9BYR3 166 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms