RNA–Protein interactions for RNA: ENST00000556929.5

TMEM260-213, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-213ENST00000556929 UBE2DNLQ8IWF7 75 aa6.73□□□□□ -1.33
TMEM260-213ENST00000556929 SMIM2Q9BVW6 85 aa6.73□□□□□ -1.33
TMEM260-213ENST00000556929 TRBV25-1A0A075B6N4 114 aa6.72□□□□□ -1.33
TMEM260-213ENST00000556929 TRAV8-6A0A0B4J262 113 aa6.72□□□□□ -1.33
TMEM260-213ENST00000556929 FCER1GP30273 86 aa6.72□□□□□ -1.33
TMEM260-213ENST00000556929 LELP1Q5T871 98 aa6.72□□□□□ -1.33
TMEM260-213ENST00000556929 Q8N8P6 123 aa6.72□□□□□ -1.33
TMEM260-213ENST00000556929 PRSS3P2Q8NHM4 247 aa6.72□□□□□ -1.33
TMEM260-213ENST00000556929 NXT2Q9NPJ8 142 aaKnown RBP6.72□□□□□ -1.33
TMEM260-213ENST00000556929 TRBV6-8A0A0A6YYG3 113 aa6.71□□□□□ -1.34
TMEM260-213ENST00000556929 IGHV1-24A0A0C4DH33 117 aa6.71□□□□□ -1.34
TMEM260-213ENST00000556929 K7EMI3 77 aa6.71□□□□□ -1.34
TMEM260-213ENST00000556929 RAB5BP61020 215 aa6.71□□□□□ -1.34
TMEM260-213ENST00000556929 C18orf32Q8TCD1 76 aa6.71□□□□□ -1.34
TMEM260-213ENST00000556929 C1orf196B1AJZ1 125 aa6.7□□□□□ -1.34
TMEM260-213ENST00000556929 IFI27P40305 119 aaPredicted RBP6.7□□□□□ -1.34
TMEM260-213ENST00000556929 AMTP48728 403 aa6.7□□□□□ -1.34
TMEM260-213ENST00000556929 MRPS16Q9Y3D3 137 aaKnown RBP6.7□□□□□ -1.34
TMEM260-213ENST00000556929 LINC00588Q9Y4M8 146 aa6.7□□□□□ -1.34
TMEM260-213ENST00000556929 IGLV2-18A0A075B6J9 118 aa6.69□□□□□ -1.34
TMEM260-213ENST00000556929 UBE2L6O14933 153 aa6.69□□□□□ -1.34
TMEM260-213ENST00000556929 TSHBP01222 138 aa6.69□□□□□ -1.34
TMEM260-213ENST00000556929 G0S2P27469 103 aa6.69□□□□□ -1.34
TMEM260-213ENST00000556929 PKIAP61925 76 aa6.69□□□□□ -1.34
TMEM260-213ENST00000556929 IQCJQ1A5X6 159 aa6.69□□□□□ -1.34
TMEM260-213ENST00000556929 ORMDL2Q53FV1 153 aa6.69□□□□□ -1.34
TMEM260-213ENST00000556929 LGALS9CQ6DKI2 356 aa6.69□□□□□ -1.34
TMEM260-213ENST00000556929 NTM-AS1Q6ZSK4 140 aa6.69□□□□□ -1.34
TMEM260-213ENST00000556929 FA2HQ7L5A8 372 aa6.69□□□□□ -1.34
TMEM260-213ENST00000556929 DEFB104AQ8WTQ1 72 aa6.69□□□□□ -1.34
TMEM260-213ENST00000556929 TMEM18Q96B42 140 aa6.69□□□□□ -1.34
TMEM260-213ENST00000556929 UPK3BQ9BT76 320 aa6.69□□□□□ -1.34
TMEM260-213ENST00000556929 TMEM243Q9BU79 118 aa6.69□□□□□ -1.34
TMEM260-213ENST00000556929 H7C423 109 aa6.68□□□□□ -1.34
TMEM260-213ENST00000556929 LINC00614P0C842 121 aa6.68□□□□□ -1.34
TMEM260-213ENST00000556929 SMAGPQ0VAQ4 97 aa6.68□□□□□ -1.34
TMEM260-213ENST00000556929 Q0VG73 95 aa6.68□□□□□ -1.34
TMEM260-213ENST00000556929 LAGE3Q14657 143 aa6.68□□□□□ -1.34
TMEM260-213ENST00000556929 NIT1Q86X76 327 aa6.68□□□□□ -1.34
TMEM260-213ENST00000556929 BAGE3Q86Y29 109 aa6.68□□□□□ -1.34
TMEM260-213ENST00000556929 CHCHD5Q9BSY4 110 aa6.68□□□□□ -1.34
TMEM260-213ENST00000556929 TMEM262E9PQX1 116 aa6.67□□□□□ -1.34
TMEM260-213ENST00000556929 SIVA1O15304 175 aa6.67□□□□□ -1.34
TMEM260-213ENST00000556929 ESDP10768 282 aa6.67□□□□□ -1.34
TMEM260-213ENST00000556929 CHCHD7Q9BUK0 85 aa6.67□□□□□ -1.34
TMEM260-213ENST00000556929 KRTAP4-8Q9BYQ9 185 aa6.67□□□□□ -1.34
TMEM260-213ENST00000556929 AP5S1Q9NUS5 200 aa6.67□□□□□ -1.34
TMEM260-213ENST00000556929 A0A087WX48 190 aa6.66□□□□□ -1.34
TMEM260-213ENST00000556929 LINC01546A6NGU7 62 aa6.66□□□□□ -1.34
TMEM260-213ENST00000556929 LINC01549A6NIU2 74 aa6.66□□□□□ -1.34
TMEM260-213ENST00000556929 HIST1H2BKO60814 126 aa6.66□□□□□ -1.34
TMEM260-213ENST00000556929 LY6G6CO95867 125 aa6.66□□□□□ -1.34
TMEM260-213ENST00000556929 HIST1H2BJP06899 126 aa6.66□□□□□ -1.34
TMEM260-213ENST00000556929 HIST1H2BOP23527 126 aa6.66□□□□□ -1.34
TMEM260-213ENST00000556929 HIST1H2BBP33778 126 aa6.66□□□□□ -1.34
TMEM260-213ENST00000556929 HIST1H2BDP58876 126 aa6.66□□□□□ -1.34
TMEM260-213ENST00000556929 HIST1H2BCP62807 126 aa6.66□□□□□ -1.34
TMEM260-213ENST00000556929 GAGE6Q13070 117 aa6.66□□□□□ -1.34
TMEM260-213ENST00000556929 HIST2H2BEQ16778 126 aa6.66□□□□□ -1.34
TMEM260-213ENST00000556929 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.66□□□□□ -1.34
TMEM260-213ENST00000556929 RNASEKQ6P5S7 137 aaKnown RBP6.66□□□□□ -1.34
TMEM260-213ENST00000556929 WFDC10BQ8IUB3 73 aa6.66□□□□□ -1.34
TMEM260-213ENST00000556929 C20orf203Q8NBC4 194 aa6.66□□□□□ -1.34
TMEM260-213ENST00000556929 LINC00476Q8WZB0 136 aa6.66□□□□□ -1.34
TMEM260-213ENST00000556929 HIST1H2BHQ93079 126 aa6.66□□□□□ -1.34
TMEM260-213ENST00000556929 CHCHD1Q96BP2 118 aaKnown RBP6.66□□□□□ -1.34
TMEM260-213ENST00000556929 HIST1H2BNQ99877 126 aa6.66□□□□□ -1.34
TMEM260-213ENST00000556929 HIST1H2BMQ99879 126 aa6.66□□□□□ -1.34
TMEM260-213ENST00000556929 Q9H8V8 135 aa6.66□□□□□ -1.34
TMEM260-213ENST00000556929 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.65□□□□□ -1.34
TMEM260-213ENST00000556929 IGKV2-29A2NJV5 120 aaPredicted RBP6.65□□□□□ -1.34
TMEM260-213ENST00000556929 BTF3P20290 206 aaKnown RBP6.65□□□□□ -1.34
TMEM260-213ENST00000556929 AMMECR1LQ6DCA0 310 aa6.65□□□□□ -1.34
TMEM260-213ENST00000556929 URB1-AS1Q96HZ7 61 aa6.65□□□□□ -1.34
TMEM260-213ENST00000556929 CYSLTR1Q9Y271 337 aa6.65□□□□□ -1.34
TMEM260-213ENST00000556929 TRAV9-2A0A087WT02 112 aa6.64□□□□□ -1.35
TMEM260-213ENST00000556929 K7EP13 123 aa6.64□□□□□ -1.35
TMEM260-213ENST00000556929 HSBP1O75506 76 aa6.64□□□□□ -1.35
TMEM260-213ENST00000556929 DNAH10OSP0CZ25 163 aa6.64□□□□□ -1.35
TMEM260-213ENST00000556929 ZNF25P17030 456 aaPredicted RBP6.64□□□□□ -1.35
TMEM260-213ENST00000556929 DGAT2L7PQ6IED9 249 aa6.64□□□□□ -1.35
TMEM260-213ENST00000556929 C2orf66Q6UXQ4 117 aa6.64□□□□□ -1.35
TMEM260-213ENST00000556929 TMEM101Q96IK0 257 aa6.64□□□□□ -1.35
TMEM260-213ENST00000556929 A0A1B0GUV1 79 aa6.63□□□□□ -1.35
TMEM260-213ENST00000556929 IGHV3-30P01768 117 aa6.63□□□□□ -1.35
TMEM260-213ENST00000556929 IGHV3-33P01772 117 aa6.63□□□□□ -1.35
TMEM260-213ENST00000556929 IGHV3-30-3P0DP02 117 aa6.63□□□□□ -1.35
TMEM260-213ENST00000556929 IGHV3-30-5P0DP03 117 aa6.63□□□□□ -1.35
TMEM260-213ENST00000556929 FGF6P10767 208 aa6.63□□□□□ -1.35
TMEM260-213ENST00000556929 NDUFA6P56556 154 aa6.63□□□□□ -1.35
TMEM260-213ENST00000556929 MPV17L2Q567V2 206 aa6.63□□□□□ -1.35
TMEM260-213ENST00000556929 LINC01556Q5JQF7 62 aa6.63□□□□□ -1.35
TMEM260-213ENST00000556929 C10orf126Q8N4M7 172 aa6.63□□□□□ -1.35
TMEM260-213ENST00000556929 TENM2Q9NT68 2774 aa6.63□□□□□ -1.35
TMEM260-213ENST00000556929 ALMS1Q8TCU4 4167 aa6.62□□□□□ -1.35
TMEM260-213ENST00000556929 LYSTQ99698 3801 aa6.62□□□□□ -1.35
TMEM260-213ENST00000556929 VPS13DQ5THJ4 4388 aa6.62□□□□□ -1.35
TMEM260-213ENST00000556929 SERF1AO75920 110 aa6.62□□□□□ -1.35
TMEM260-213ENST00000556929 HBDP02042 147 aa6.62□□□□□ -1.35
TMEM260-213ENST00000556929 RBX1P62877 108 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms