RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 DAZ2Q13117 558 aaKnown RBP11.24□□□□□ -0.61
ARHGEF40-207ENST00000556399 DAZ4Q86SG3 579 aaKnown RBP11.24□□□□□ -0.61
ARHGEF40-207ENST00000556399 C5orf38Q86SI9 138 aa11.24□□□□□ -0.61
ARHGEF40-207ENST00000556399 DAZ3Q9NR90 486 aaKnown RBP11.24□□□□□ -0.61
ARHGEF40-207ENST00000556399 RPL32P62910 135 aaKnown RBP11.23□□□□□ -0.61
ARHGEF40-207ENST00000556399 PSMG3-AS1Q96PY0 264 aa11.23□□□□□ -0.61
ARHGEF40-207ENST00000556399 XGP55808 180 aa11.23□□□□□ -0.61
ARHGEF40-207ENST00000556399 UBL5Q9BZL1 73 aa11.23□□□□□ -0.61
ARHGEF40-207ENST00000556399 TRBV6-5A0A0K0K1A5 114 aa11.23□□□□□ -0.61
ARHGEF40-207ENST00000556399 K7EQG2 157 aa11.23□□□□□ -0.61
ARHGEF40-207ENST00000556399 TRACP01848 142 aa11.23□□□□□ -0.61
ARHGEF40-207ENST00000556399 PRRC2CQ9Y520 2896 aaKnown RBP11.22□□□□□ -0.61
ARHGEF40-207ENST00000556399 IGLV2-18A0A075B6J9 118 aa11.22□□□□□ -0.61
ARHGEF40-207ENST00000556399 CLPSL2Q6UWE3 100 aa11.22□□□□□ -0.61
ARHGEF40-207ENST00000556399 WNK1Q9H4A3 2382 aa11.22□□□□□ -0.61
ARHGEF40-207ENST00000556399 TMEM89A2RUT3 159 aa11.22□□□□□ -0.61
ARHGEF40-207ENST00000556399 Q96MF0 132 aa11.22□□□□□ -0.61
ARHGEF40-207ENST00000556399 SORL1Q92673 2214 aa11.22□□□□□ -0.61
ARHGEF40-207ENST00000556399 XCL1P47992 114 aa11.22□□□□□ -0.61
ARHGEF40-207ENST00000556399 TMEM61Q8N0U2 210 aa11.21□□□□□ -0.61
ARHGEF40-207ENST00000556399 TRBV30A0A0K0K1B3 111 aa11.21□□□□□ -0.62
ARHGEF40-207ENST00000556399 COX7B2Q8TF08 81 aa11.21□□□□□ -0.62
ARHGEF40-207ENST00000556399 NRGNQ92686 78 aa11.2□□□□□ -0.62
ARHGEF40-207ENST00000556399 CDKN2A-AS1Q9UH64 79 aa11.2□□□□□ -0.62
ARHGEF40-207ENST00000556399 C2CD3Q4AC94 2353 aa11.2□□□□□ -0.62
ARHGEF40-207ENST00000556399 A0A096LPF7 62 aa11.2□□□□□ -0.62
ARHGEF40-207ENST00000556399 CRLF1O75462 422 aa11.2□□□□□ -0.62
ARHGEF40-207ENST00000556399 KLLNB2CW77 178 aa11.2□□□□□ -0.62
ARHGEF40-207ENST00000556399 ORMDL1Q9P0S3 153 aa11.2□□□□□ -0.62
ARHGEF40-207ENST00000556399 H0YGX0 51 aa11.2□□□□□ -0.62
ARHGEF40-207ENST00000556399 LINC00467Q9BRT7 94 aa11.2□□□□□ -0.62
ARHGEF40-207ENST00000556399 CUL9Q8IWT3 2517 aa11.2□□□□□ -0.62
ARHGEF40-207ENST00000556399 IGIPA6NJ69 53 aa11.19□□□□□ -0.62
ARHGEF40-207ENST00000556399 TSHBP01222 138 aa11.19□□□□□ -0.62
ARHGEF40-207ENST00000556399 PSCAO43653 123 aa11.19□□□□□ -0.62
ARHGEF40-207ENST00000556399 UBE2D1P51668 147 aa11.18□□□□□ -0.62
ARHGEF40-207ENST00000556399 IGKV3D-7A0A0C4DH55 119 aa11.18□□□□□ -0.62
ARHGEF40-207ENST00000556399 PROK1P58294 105 aa11.18□□□□□ -0.62
ARHGEF40-207ENST00000556399 HAMPP81172 84 aa11.18□□□□□ -0.62
ARHGEF40-207ENST00000556399 TMEM126AQ9H061 195 aa11.18□□□□□ -0.62
ARHGEF40-207ENST00000556399 CCL24O00175 119 aa11.18□□□□□ -0.62
ARHGEF40-207ENST00000556399 IGF2RP11717 2491 aa11.18□□□□□ -0.62
ARHGEF40-207ENST00000556399 MIR7-3HGQ8N6C7 128 aa11.17□□□□□ -0.62
ARHGEF40-207ENST00000556399 TRAV4A0A0B4J268 109 aa11.17□□□□□ -0.62
ARHGEF40-207ENST00000556399 A8MZ25 164 aa11.17□□□□□ -0.62
ARHGEF40-207ENST00000556399 C19orf84I3L1E1 186 aa11.17□□□□□ -0.62
ARHGEF40-207ENST00000556399 COX7A2LO14548 114 aa11.17□□□□□ -0.62
ARHGEF40-207ENST00000556399 Q9HAA7 133 aa11.17□□□□□ -0.62
ARHGEF40-207ENST00000556399 CHD9Q3L8U1 2897 aa11.16□□□□□ -0.62
ARHGEF40-207ENST00000556399 IGLV4-69A0A075B6H9 119 aa11.16□□□□□ -0.62
ARHGEF40-207ENST00000556399 CRYGDP07320 174 aa11.16□□□□□ -0.62
ARHGEF40-207ENST00000556399 CDSNQ15517 529 aa11.16□□□□□ -0.62
ARHGEF40-207ENST00000556399 TMEM263Q8WUH6 116 aaKnown RBP11.16□□□□□ -0.62
ARHGEF40-207ENST00000556399 MKI67P46013 3256 aaKnown RBP11.16□□□□□ -0.62
ARHGEF40-207ENST00000556399 C1orf43Q9BWL3 253 aa11.16□□□□□ -0.62
ARHGEF40-207ENST00000556399 ANGP03950 147 aaKnown RBP11.15□□□□□ -0.62
ARHGEF40-207ENST00000556399 C10orf99Q6UWK7 81 aa11.15□□□□□ -0.62
ARHGEF40-207ENST00000556399 LINC00643Q86TS7 51 aa11.15□□□□□ -0.62
ARHGEF40-207ENST00000556399 MAP6D1Q9H9H5 199 aa11.15□□□□□ -0.62
ARHGEF40-207ENST00000556399 PYGO1Q9Y3Y4 419 aa11.15□□□□□ -0.62
ARHGEF40-207ENST00000556399 LECT2O14960 151 aa11.15□□□□□ -0.62
ARHGEF40-207ENST00000556399 C16orf74Q96GX8 76 aa11.15□□□□□ -0.62
ARHGEF40-207ENST00000556399 ATOX1O00244 68 aa11.15□□□□□ -0.62
ARHGEF40-207ENST00000556399 C9orf85Q96MD7 179 aa11.15□□□□□ -0.62
ARHGEF40-207ENST00000556399 LINC00308Q8TCZ7 52 aa11.14□□□□□ -0.63
ARHGEF40-207ENST00000556399 A0A1B0GX51 115 aa11.14□□□□□ -0.63
ARHGEF40-207ENST00000556399 TSPEAR-AS2P59090 65 aa11.14□□□□□ -0.63
ARHGEF40-207ENST00000556399 CACNA1AO00555 2505 aa11.14□□□□□ -0.63
ARHGEF40-207ENST00000556399 F5H768 121 aa11.13□□□□□ -0.63
ARHGEF40-207ENST00000556399 UBE2D3P61077 147 aa11.13□□□□□ -0.63
ARHGEF40-207ENST00000556399 DAD1P61803 113 aa11.13□□□□□ -0.63
ARHGEF40-207ENST00000556399 UBE2D2P62837 147 aa11.13□□□□□ -0.63
ARHGEF40-207ENST00000556399 MRPL23Q16540 153 aaKnown RBP11.13□□□□□ -0.63
ARHGEF40-207ENST00000556399 DCANP1Q8TF63 244 aa11.13□□□□□ -0.63
ARHGEF40-207ENST00000556399 TRBV10-1A0A0K0K1A3 114 aa11.12□□□□□ -0.63
ARHGEF40-207ENST00000556399 PCSK5Q92824 1860 aa11.12□□□□□ -0.63
ARHGEF40-207ENST00000556399 HIST2H2BCQ6DN03 193 aa11.12□□□□□ -0.63
ARHGEF40-207ENST00000556399 CLUHP3Q96NS8 147 aa11.12□□□□□ -0.63
ARHGEF40-207ENST00000556399 DSCR8Q96T75 97 aa11.12□□□□□ -0.63
ARHGEF40-207ENST00000556399 NDUFA1O15239 70 aa11.12□□□□□ -0.63
ARHGEF40-207ENST00000556399 HIST2H2BDQ6DRA6 164 aa11.12□□□□□ -0.63
ARHGEF40-207ENST00000556399 AGRNO00468 2067 aa11.11□□□□□ -0.63
ARHGEF40-207ENST00000556399 LINC01546A6NGU7 62 aa11.11□□□□□ -0.63
ARHGEF40-207ENST00000556399 PTPRBP23467 1997 aa11.11□□□□□ -0.63
ARHGEF40-207ENST00000556399 MRAPQ8TCY5 172 aa11.11□□□□□ -0.63
ARHGEF40-207ENST00000556399 C4orf3Q8WVX3 66 aa11.11□□□□□ -0.63
ARHGEF40-207ENST00000556399 PTPN13Q12923 2485 aa11.11□□□□□ -0.63
ARHGEF40-207ENST00000556399 GYPEP15421 78 aa11.1□□□□□ -0.63
ARHGEF40-207ENST00000556399 RBMY1FQ15415 496 aaKnown RBP11.1□□□□□ -0.63
ARHGEF40-207ENST00000556399 CRIP2P52943 208 aaPredicted RBP11.1□□□□□ -0.63
ARHGEF40-207ENST00000556399 APOC4P55056 127 aa11.1□□□□□ -0.63
ARHGEF40-207ENST00000556399 Q6ZTI0 123 aa11.1□□□□□ -0.63
ARHGEF40-207ENST00000556399 PSMB8P28062 276 aa11.1□□□□□ -0.63
ARHGEF40-207ENST00000556399 C14orf132Q9NPU4 83 aa11.1□□□□□ -0.63
ARHGEF40-207ENST00000556399 EDN2P20800 178 aa11.09□□□□□ -0.63
ARHGEF40-207ENST00000556399 TIRAPP58753 221 aa11.09□□□□□ -0.63
ARHGEF40-207ENST00000556399 LST1O00453 97 aa11.09□□□□□ -0.63
ARHGEF40-207ENST00000556399 ZNF561-AS1K7EIQ3 104 aa11.09□□□□□ -0.63
ARHGEF40-207ENST00000556399 IGLV1-40P01703 118 aa11.09□□□□□ -0.63
ARHGEF40-207ENST00000556399 TMEM258P61165 79 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms