RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 ADCYAP1P18509 176 aa6.48□□□□□ -1.37
SRP54-210ENST00000556380 RIGQ13278 110 aa6.48□□□□□ -1.37
SRP54-210ENST00000556380 C10orf126Q8N4M7 172 aa6.48□□□□□ -1.37
SRP54-210ENST00000556380 SEC11CQ9BY50 192 aa6.48□□□□□ -1.37
SRP54-210ENST00000556380 IGHV3-30P01768 117 aa6.47□□□□□ -1.37
SRP54-210ENST00000556380 IGHV3-33P01772 117 aa6.47□□□□□ -1.37
SRP54-210ENST00000556380 S100A8P05109 93 aa6.47□□□□□ -1.37
SRP54-210ENST00000556380 IGHV3-30-3P0DP02 117 aa6.47□□□□□ -1.37
SRP54-210ENST00000556380 IGHV3-30-5P0DP03 117 aa6.47□□□□□ -1.37
SRP54-210ENST00000556380 RAB4AP20338 218 aa6.47□□□□□ -1.37
SRP54-210ENST00000556380 PKIAP61925 76 aa6.47□□□□□ -1.37
SRP54-210ENST00000556380 IQCJQ1A5X6 159 aa6.47□□□□□ -1.37
SRP54-210ENST00000556380 NFE4Q86UQ8 179 aa6.47□□□□□ -1.37
SRP54-210ENST00000556380 COMMD7Q86VX2 200 aa6.47□□□□□ -1.37
SRP54-210ENST00000556380 PLA2G2DQ9UNK4 145 aa6.47□□□□□ -1.37
SRP54-210ENST00000556380 TRBV6-5A0A0K0K1A5 114 aa6.46□□□□□ -1.38
SRP54-210ENST00000556380 A0A1B0GXF2 115 aa6.46□□□□□ -1.38
SRP54-210ENST00000556380 F8W036 122 aa6.46□□□□□ -1.38
SRP54-210ENST00000556380 KRTAP10-2P60368 255 aa6.46□□□□□ -1.38
SRP54-210ENST00000556380 ATP5L2Q7Z4Y8 100 aa6.46□□□□□ -1.38
SRP54-210ENST00000556380 AMN1Q8IY45 258 aa6.46□□□□□ -1.38
SRP54-210ENST00000556380 RPL39LQ96EH5 51 aaKnown RBP6.46□□□□□ -1.38
SRP54-210ENST00000556380 IMMP2LQ96T52 175 aa6.46□□□□□ -1.38
SRP54-210ENST00000556380 CHCHD7Q9BUK0 85 aa6.46□□□□□ -1.38
SRP54-210ENST00000556380 CTDSP1Q9GZU7 261 aa6.46□□□□□ -1.38
SRP54-210ENST00000556380 KIAA1109Q2LD37 5005 aa6.45□□□□□ -1.38
SRP54-210ENST00000556380 PPP1R17O96001 155 aa6.45□□□□□ -1.38
SRP54-210ENST00000556380 LAGE3Q14657 143 aa6.45□□□□□ -1.38
SRP54-210ENST00000556380 C10orf91Q5T1B1 145 aa6.45□□□□□ -1.38
SRP54-210ENST00000556380 FAM104BQ5XKR9 115 aa6.45□□□□□ -1.38
SRP54-210ENST00000556380 RPS10P46783 165 aaKnown RBP6.44□□□□□ -1.38
SRP54-210ENST00000556380 CAMPP49913 170 aa6.44□□□□□ -1.38
SRP54-210ENST00000556380 MRPL51Q4U2R6 128 aaKnown RBP6.44□□□□□ -1.38
SRP54-210ENST00000556380 KCNIP4Q6PIL6 250 aa6.44□□□□□ -1.38
SRP54-210ENST00000556380 NRACQ8N912 160 aa6.44□□□□□ -1.38
SRP54-210ENST00000556380 MRAP2Q96G30 205 aa6.44□□□□□ -1.38
SRP54-210ENST00000556380 TMEM242Q9NWH2 141 aa6.44□□□□□ -1.38
SRP54-210ENST00000556380 DNAH8Q96JB1 4490 aa6.43□□□□□ -1.38
SRP54-210ENST00000556380 TRBV25-1A0A075B6N4 114 aa6.43□□□□□ -1.38
SRP54-210ENST00000556380 A0A087WTM6 91 aa6.43□□□□□ -1.38
SRP54-210ENST00000556380 A0A087WX48 190 aa6.43□□□□□ -1.38
SRP54-210ENST00000556380 IGHV1-24A0A0C4DH33 117 aa6.43□□□□□ -1.38
SRP54-210ENST00000556380 SDHAF1A6NFY7 115 aa6.43□□□□□ -1.38
SRP54-210ENST00000556380 TMEM262E9PQX1 116 aa6.43□□□□□ -1.38
SRP54-210ENST00000556380 PLA2G1BP04054 148 aaKnown RBP6.43□□□□□ -1.38
SRP54-210ENST00000556380 POLR2KP53803 58 aaKnown RBP6.43□□□□□ -1.38
SRP54-210ENST00000556380 RBX1P62877 108 aa6.43□□□□□ -1.38
SRP54-210ENST00000556380 HBBP68871 147 aa6.43□□□□□ -1.38
SRP54-210ENST00000556380 GAGE6Q13070 117 aa6.43□□□□□ -1.38
SRP54-210ENST00000556380 MPV17L2Q567V2 206 aa6.43□□□□□ -1.38
SRP54-210ENST00000556380 MRPL54Q6P161 138 aaKnown RBP6.43□□□□□ -1.38
SRP54-210ENST00000556380 ATRAIDQ6UW56 229 aa6.43□□□□□ -1.38
SRP54-210ENST00000556380 DEFB104AQ8WTQ1 72 aa6.43□□□□□ -1.38
SRP54-210ENST00000556380 CHCHD5Q9BSY4 110 aa6.43□□□□□ -1.38
SRP54-210ENST00000556380 TMEM70Q9BUB7 260 aa6.43□□□□□ -1.38
SRP54-210ENST00000556380 KLK12Q9UKR0 248 aa6.43□□□□□ -1.38
SRP54-210ENST00000556380 CARHSP1Q9Y2V2 147 aaKnown RBP6.43□□□□□ -1.38
SRP54-210ENST00000556380 HERC2O95714 4834 aa6.43□□□□□ -1.38
SRP54-210ENST00000556380 APOBP04114 4563 aaKnown RBP6.42□□□□□ -1.38
SRP54-210ENST00000556380 TRAV9-1A0A075B6T8 112 aa6.42□□□□□ -1.38
SRP54-210ENST00000556380 TRAV8-3A0A0A6YYJ7 113 aa6.42□□□□□ -1.38
SRP54-210ENST00000556380 LRCOL1A6NCL2 159 aa6.42□□□□□ -1.38
SRP54-210ENST00000556380 SMKR1H3BMG3 65 aa6.42□□□□□ -1.38
SRP54-210ENST00000556380 NCR2O95944 276 aa6.42□□□□□ -1.38
SRP54-210ENST00000556380 ELOBQ15370 118 aa6.42□□□□□ -1.38
SRP54-210ENST00000556380 ENHOQ6UWT2 76 aa6.42□□□□□ -1.38
SRP54-210ENST00000556380 Q8N976 141 aa6.42□□□□□ -1.38
SRP54-210ENST00000556380 TMEM243Q9BU79 118 aa6.42□□□□□ -1.38
SRP54-210ENST00000556380 Q9HAA7 133 aa6.42□□□□□ -1.38
SRP54-210ENST00000556380 URGCP-MRPS24S4R325 110 aa6.42□□□□□ -1.38
SRP54-210ENST00000556380 RYR1P21817 5038 aa6.41□□□□□ -1.38
SRP54-210ENST00000556380 TRBV24-1A0A075B6N3 115 aa6.41□□□□□ -1.38
SRP54-210ENST00000556380 TRBV27A0A0K0K1C4 114 aa6.41□□□□□ -1.38
SRP54-210ENST00000556380 A0A1B0GUV1 79 aa6.41□□□□□ -1.38
SRP54-210ENST00000556380 I3L3M4 83 aa6.41□□□□□ -1.38
SRP54-210ENST00000556380 COTL1Q14019 142 aa6.41□□□□□ -1.38
SRP54-210ENST00000556380 RHEBQ15382 184 aa6.41□□□□□ -1.38
SRP54-210ENST00000556380 NDUFA5Q16718 116 aa6.41□□□□□ -1.38
SRP54-210ENST00000556380 MAPKAPK5-AS1Q8N8E1 139 aa6.41□□□□□ -1.38
SRP54-210ENST00000556380 BTF3L4Q96K17 158 aa6.41□□□□□ -1.38
SRP54-210ENST00000556380 TM2D2Q9BX73 214 aa6.41□□□□□ -1.38
SRP54-210ENST00000556380 ST20Q9HBF5 79 aa6.41□□□□□ -1.38
SRP54-210ENST00000556380 PRR34Q9NV39 138 aa6.41□□□□□ -1.38
SRP54-210ENST00000556380 HSPG2P98160 4391 aa6.41□□□□□ -1.38
SRP54-210ENST00000556380 TSHBP01222 138 aa6.4□□□□□ -1.38
SRP54-210ENST00000556380 PPBPP02775 128 aa6.4□□□□□ -1.38
SRP54-210ENST00000556380 ESDP10768 282 aa6.4□□□□□ -1.38
SRP54-210ENST00000556380 AMTP48728 403 aa6.4□□□□□ -1.38
SRP54-210ENST00000556380 SPATA12Q7Z6I5 190 aa6.4□□□□□ -1.38
SRP54-210ENST00000556380 C20orf203Q8NBC4 194 aa6.4□□□□□ -1.38
SRP54-210ENST00000556380 UBE2WQ96B02 151 aa6.4□□□□□ -1.38
SRP54-210ENST00000556380 IGLV4-60A0A075B6I1 120 aa6.39□□□□□ -1.39
SRP54-210ENST00000556380 H7C423 109 aa6.39□□□□□ -1.39
SRP54-210ENST00000556380 VCYO14598 125 aa6.39□□□□□ -1.39
SRP54-210ENST00000556380 PHOX2AO14813 284 aa6.39□□□□□ -1.39
SRP54-210ENST00000556380 TCAPO15273 167 aa6.39□□□□□ -1.39
SRP54-210ENST00000556380 PMCHP20382 165 aa6.39□□□□□ -1.39
SRP54-210ENST00000556380 S100PP25815 95 aa6.39□□□□□ -1.39
SRP54-210ENST00000556380 SUMO2P61956 95 aaKnown RBP6.39□□□□□ -1.39
SRP54-210ENST00000556380 RPL32P62910 135 aaKnown RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms