RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 RPS20P60866 119 aaKnown RBP8.47□□□□□ -1.05
TGFB3-204ENST00000556285 CACNG7P62955 275 aa8.47□□□□□ -1.05
TGFB3-204ENST00000556285 RASL11AQ6T310 242 aa8.47□□□□□ -1.05
TGFB3-204ENST00000556285 A0A1B0GUV1 79 aa8.46□□□□□ -1.06
TGFB3-204ENST00000556285 NTF3P20783 257 aa8.46□□□□□ -1.06
TGFB3-204ENST00000556285 GNG4P50150 75 aa8.46□□□□□ -1.06
TGFB3-204ENST00000556285 CNBPP62633 177 aaKnown RBP8.46□□□□□ -1.06
TGFB3-204ENST00000556285 EIF5AP63241 154 aaKnown RBP8.46□□□□□ -1.06
TGFB3-204ENST00000556285 CIRBPQ14011 172 aaKnown RBP8.46□□□□□ -1.06
TGFB3-204ENST00000556285 LCE2BO14633 110 aa8.45□□□□□ -1.06
TGFB3-204ENST00000556285 P01737 135 aa8.45□□□□□ -1.06
TGFB3-204ENST00000556285 DPH3P1Q9H4G8 78 aa8.45□□□□□ -1.06
TGFB3-204ENST00000556285 NIT2Q9NQR4 276 aa8.45□□□□□ -1.06
TGFB3-204ENST00000556285 LRP2P98164 4655 aa8.45□□□□□ -1.06
TGFB3-204ENST00000556285 TRAV8-4A0A0B4J246 113 aa8.44□□□□□ -1.06
TGFB3-204ENST00000556285 F2Z2F3 143 aa8.44□□□□□ -1.06
TGFB3-204ENST00000556285 IFNA1P01562 189 aa8.44□□□□□ -1.06
TGFB3-204ENST00000556285 MEF2BQ02080 365 aaPredicted RBP8.44□□□□□ -1.06
TGFB3-204ENST00000556285 NUDT10Q8NFP7 164 aa8.44□□□□□ -1.06
TGFB3-204ENST00000556285 NUDT11Q96G61 164 aa8.44□□□□□ -1.06
TGFB3-204ENST00000556285 PGLYRP4Q96LB8 373 aa8.44□□□□□ -1.06
TGFB3-204ENST00000556285 MED9Q9NWA0 146 aa8.44□□□□□ -1.06
TGFB3-204ENST00000556285 RNF213Q63HN8 5207 aa8.43□□□□□ -1.06
TGFB3-204ENST00000556285 IGHV3-64A0A075B6Q5 118 aa8.43□□□□□ -1.06
TGFB3-204ENST00000556285 A0A087WYN8 130 aa8.43□□□□□ -1.06
TGFB3-204ENST00000556285 TRAV26-2A0A0B4J265 109 aa8.43□□□□□ -1.06
TGFB3-204ENST00000556285 IGKV3OR2-268A0A0C4DH90 116 aa8.43□□□□□ -1.06
TGFB3-204ENST00000556285 TRGC1P0CF51 173 aa8.43□□□□□ -1.06
TGFB3-204ENST00000556285 CTRLP40313 264 aa8.43□□□□□ -1.06
TGFB3-204ENST00000556285 AMTP48728 403 aa8.43□□□□□ -1.06
TGFB3-204ENST00000556285 SULT1A2P50226 295 aa8.43□□□□□ -1.06
TGFB3-204ENST00000556285 C9orf62Q8N4C0 152 aa8.43□□□□□ -1.06
TGFB3-204ENST00000556285 C15orf56Q8N910 161 aa8.43□□□□□ -1.06
TGFB3-204ENST00000556285 GATD1Q8NB37 220 aa8.43□□□□□ -1.06
TGFB3-204ENST00000556285 SMIM12Q96EX1 92 aa8.43□□□□□ -1.06
TGFB3-204ENST00000556285 XKRY2A2RUG3 117 aa8.42□□□□□ -1.06
TGFB3-204ENST00000556285 GAGE12HA6NDE8 117 aa8.42□□□□□ -1.06
TGFB3-204ENST00000556285 UBE2L6O14933 153 aa8.42□□□□□ -1.06
TGFB3-204ENST00000556285 PDE6DO43924 150 aa8.42□□□□□ -1.06
TGFB3-204ENST00000556285 FOXA3P55318 350 aaPredicted RBP8.42□□□□□ -1.06
TGFB3-204ENST00000556285 COTL1Q14019 142 aa8.42□□□□□ -1.06
TGFB3-204ENST00000556285 SPACA4Q8TDM5 124 aa8.42□□□□□ -1.06
TGFB3-204ENST00000556285 DPH3Q96FX2 82 aa8.42□□□□□ -1.06
TGFB3-204ENST00000556285 RNASE7Q9H1E1 156 aaKnown RBP8.42□□□□□ -1.06
TGFB3-204ENST00000556285 K7EN84 100 aa8.41□□□□□ -1.06
TGFB3-204ENST00000556285 BCL2P10415 239 aa8.41□□□□□ -1.06
TGFB3-204ENST00000556285 TWIST1Q15672 202 aa8.41□□□□□ -1.06
TGFB3-204ENST00000556285 Q6ZNX1 250 aa8.41□□□□□ -1.06
TGFB3-204ENST00000556285 RPL39LQ96EH5 51 aaKnown RBP8.41□□□□□ -1.06
TGFB3-204ENST00000556285 AP5S1Q9NUS5 200 aa8.41□□□□□ -1.06
TGFB3-204ENST00000556285 ZNF561-AS1K7EIQ3 104 aa8.4□□□□□ -1.06
TGFB3-204ENST00000556285 HIGD2BQ4VC39 106 aa8.4□□□□□ -1.06
TGFB3-204ENST00000556285 WDR73Q6P4I2 378 aa8.4□□□□□ -1.06
TGFB3-204ENST00000556285 OCC1Q8TAD7 63 aa8.4□□□□□ -1.06
TGFB3-204ENST00000556285 CDIP1Q9H305 208 aa8.4□□□□□ -1.06
TGFB3-204ENST00000556285 RPP21Q9H633 154 aaKnown RBP8.4□□□□□ -1.06
TGFB3-204ENST00000556285 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.39□□□□□ -1.07
TGFB3-204ENST00000556285 IGKV2-29A2NJV5 120 aaPredicted RBP8.39□□□□□ -1.07
TGFB3-204ENST00000556285 TEX46H3BTG2 121 aa8.39□□□□□ -1.07
TGFB3-204ENST00000556285 COX6A2Q02221 97 aa8.39□□□□□ -1.07
TGFB3-204ENST00000556285 Q6ZRU5 148 aa8.39□□□□□ -1.07
TGFB3-204ENST00000556285 GTSF1Q8WW33 167 aa8.39□□□□□ -1.07
TGFB3-204ENST00000556285 CNFNQ9BYD5 112 aa8.39□□□□□ -1.07
TGFB3-204ENST00000556285 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.38□□□□□ -1.07
TGFB3-204ENST00000556285 PHOX2AO14813 284 aa8.38□□□□□ -1.07
TGFB3-204ENST00000556285 EIF5AL1Q6IS14 154 aaKnown RBP8.38□□□□□ -1.07
TGFB3-204ENST00000556285 PRSS3P2Q8NHM4 247 aa8.38□□□□□ -1.07
TGFB3-204ENST00000556285 RNF185Q96GF1 192 aa8.38□□□□□ -1.07
TGFB3-204ENST00000556285 BIN3Q9NQY0 253 aa8.38□□□□□ -1.07
TGFB3-204ENST00000556285 PLAC8Q9NZF1 115 aa8.38□□□□□ -1.07
TGFB3-204ENST00000556285 GAS8-AS1O95177 125 aa8.37□□□□□ -1.07
TGFB3-204ENST00000556285 AMMECR1LQ6DCA0 310 aa8.37□□□□□ -1.07
TGFB3-204ENST00000556285 CHCHD10Q8WYQ3 142 aaPredicted RBP8.37□□□□□ -1.07
TGFB3-204ENST00000556285 FGF6P10767 208 aa8.36□□□□□ -1.07
TGFB3-204ENST00000556285 RPS10P46783 165 aaKnown RBP8.36□□□□□ -1.07
TGFB3-204ENST00000556285 RNASEKQ6P5S7 137 aaKnown RBP8.36□□□□□ -1.07
TGFB3-204ENST00000556285 IGKV2-24A0A0C4DH68 120 aa8.35□□□□□ -1.07
TGFB3-204ENST00000556285 FAM231BA6NCW3 169 aa8.35□□□□□ -1.07
TGFB3-204ENST00000556285 FOXI1Q12951 378 aa8.35□□□□□ -1.07
TGFB3-204ENST00000556285 MAJINQ3KP22 176 aa8.35□□□□□ -1.07
TGFB3-204ENST00000556285 CFAP161Q6P656 301 aa8.35□□□□□ -1.07
TGFB3-204ENST00000556285 LINC00526Q96FQ7 95 aa8.35□□□□□ -1.07
TGFB3-204ENST00000556285 GVQW2A0A096LPI5 108 aaPredicted RBP8.34□□□□□ -1.07
TGFB3-204ENST00000556285 SDHAF1A6NFY7 115 aa8.34□□□□□ -1.07
TGFB3-204ENST00000556285 NDUFS6O75380 124 aaKnown RBP8.34□□□□□ -1.07
TGFB3-204ENST00000556285 NCR2O95944 276 aa8.34□□□□□ -1.07
TGFB3-204ENST00000556285 APCSP02743 223 aa8.34□□□□□ -1.07
TGFB3-204ENST00000556285 SLC51BQ86UW2 128 aa8.34□□□□□ -1.07
TGFB3-204ENST00000556285 TCTE3Q8IZS6 198 aa8.34□□□□□ -1.07
TGFB3-204ENST00000556285 LYPD6BQ8NI32 183 aa8.34□□□□□ -1.07
TGFB3-204ENST00000556285 A0A096LNI7 61 aa8.33□□□□□ -1.08
TGFB3-204ENST00000556285 STPG4Q8N801 248 aa8.33□□□□□ -1.08
TGFB3-204ENST00000556285 GATCO43716 136 aaKnown RBP8.32□□□□□ -1.08
TGFB3-204ENST00000556285 PMCHP20382 165 aa8.32□□□□□ -1.08
TGFB3-204ENST00000556285 XCL1P47992 114 aa8.32□□□□□ -1.08
TGFB3-204ENST00000556285 C7orf33Q8WU49 177 aa8.32□□□□□ -1.08
TGFB3-204ENST00000556285 LINC00959A0A1B0GUT2 108 aa8.31□□□□□ -1.08
TGFB3-204ENST00000556285 H7C423 109 aa8.31□□□□□ -1.08
TGFB3-204ENST00000556285 I3L3M4 83 aa8.31□□□□□ -1.08
TGFB3-204ENST00000556285 CCL25O15444 150 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms