RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 ZC2HC1AQ96GY0 325 aa4.32□□□□□ -1.72
ATXN3-236ENST00000556220 SMIM7Q9BQ49 75 aa4.32□□□□□ -1.72
ATXN3-236ENST00000556220 NKX6-2Q9C056 277 aaPredicted RBP4.32□□□□□ -1.72
ATXN3-236ENST00000556220 OTORQ9NRC9 128 aa4.32□□□□□ -1.72
ATXN3-236ENST00000556220 TMEM167BQ9NRX6 74 aa4.32□□□□□ -1.72
ATXN3-236ENST00000556220 TGIF2-C20orf24A0A0A6YYL0 155 aa4.31□□□□□ -1.72
ATXN3-236ENST00000556220 TRBV6-1A0A0K0K1D8 114 aa4.31□□□□□ -1.72
ATXN3-236ENST00000556220 GNRH2O43555 120 aa4.31□□□□□ -1.72
ATXN3-236ENST00000556220 ZNF138P52744 262 aa4.31□□□□□ -1.72
ATXN3-236ENST00000556220 PDE6HQ13956 83 aa4.31□□□□□ -1.72
ATXN3-236ENST00000556220 ELOBQ15370 118 aa4.31□□□□□ -1.72
ATXN3-236ENST00000556220 Q6AWC8 147 aa4.31□□□□□ -1.72
ATXN3-236ENST00000556220 WDR73Q6P4I2 378 aa4.31□□□□□ -1.72
ATXN3-236ENST00000556220 COX8CQ7Z4L0 72 aa4.31□□□□□ -1.72
ATXN3-236ENST00000556220 C5orf17Q8NAS9 161 aa4.31□□□□□ -1.72
ATXN3-236ENST00000556220 GTSF1Q8WW33 167 aa4.31□□□□□ -1.72
ATXN3-236ENST00000556220 RNASE7Q9H1E1 156 aaKnown RBP4.31□□□□□ -1.72
ATXN3-236ENST00000556220 SMDT1Q9H4I9 107 aa4.31□□□□□ -1.72
ATXN3-236ENST00000556220 KLK12Q9UKR0 248 aa4.31□□□□□ -1.72
ATXN3-236ENST00000556220 A0A087WWC5 75 aa4.3□□□□□ -1.72
ATXN3-236ENST00000556220 IGHV3-73A0A0B4J1V6 119 aa4.3□□□□□ -1.72
ATXN3-236ENST00000556220 F6UZH7 168 aa4.3□□□□□ -1.72
ATXN3-236ENST00000556220 PRYO14603 147 aa4.3□□□□□ -1.72
ATXN3-236ENST00000556220 PRSS1P07477 247 aa4.3□□□□□ -1.72
ATXN3-236ENST00000556220 GZMBP10144 247 aa4.3□□□□□ -1.72
ATXN3-236ENST00000556220 Q0VG73 95 aa4.3□□□□□ -1.72
ATXN3-236ENST00000556220 CFAP126Q5VTH2 177 aa4.3□□□□□ -1.72
ATXN3-236ENST00000556220 PET117Q6UWS5 81 aa4.3□□□□□ -1.72
ATXN3-236ENST00000556220 NIT1Q86X76 327 aa4.3□□□□□ -1.72
ATXN3-236ENST00000556220 DPH3Q96FX2 82 aa4.3□□□□□ -1.72
ATXN3-236ENST00000556220 AAMDCQ9H7C9 122 aa4.3□□□□□ -1.72
ATXN3-236ENST00000556220 NAT8Q9UHE5 227 aa4.3□□□□□ -1.72
ATXN3-236ENST00000556220 URGCP-MRPS24S4R325 110 aa4.3□□□□□ -1.72
ATXN3-236ENST00000556220 A0A087WYN8 130 aa4.29□□□□□ -1.72
ATXN3-236ENST00000556220 PDE6DO43924 150 aa4.29□□□□□ -1.72
ATXN3-236ENST00000556220 LINC00694P0DN24 101 aa4.29□□□□□ -1.72
ATXN3-236ENST00000556220 MGST1P10620 155 aaKnown RBP4.29□□□□□ -1.72
ATXN3-236ENST00000556220 CAMPP49913 170 aa4.29□□□□□ -1.72
ATXN3-236ENST00000556220 TAS2R45P59539 299 aa4.29□□□□□ -1.72
ATXN3-236ENST00000556220 ADIRFQ15847 76 aa4.29□□□□□ -1.72
ATXN3-236ENST00000556220 TMEM241Q24JQ0 296 aa4.29□□□□□ -1.72
ATXN3-236ENST00000556220 REG3GQ6UW15 175 aa4.29□□□□□ -1.72
ATXN3-236ENST00000556220 RNF185Q96GF1 192 aa4.29□□□□□ -1.72
ATXN3-236ENST00000556220 RPS10P5Q9NQ39 176 aa4.29□□□□□ -1.72
ATXN3-236ENST00000556220 PSG8Q9UQ74 426 aa4.29□□□□□ -1.72
ATXN3-236ENST00000556220 KIF25-AS1Q9Y6Z4 181 aa4.29□□□□□ -1.72
ATXN3-236ENST00000556220 IGKV3D-20A0A0C4DH25 116 aa4.28□□□□□ -1.72
ATXN3-236ENST00000556220 GAGE12JA6NER3 117 aa4.28□□□□□ -1.72
ATXN3-236ENST00000556220 IFNA1P01562 189 aa4.28□□□□□ -1.72
ATXN3-236ENST00000556220 TAGLN2P37802 199 aaKnown RBP4.28□□□□□ -1.72
ATXN3-236ENST00000556220 FLI1Q01543 452 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-236ENST00000556220 GAGE1Q13065 139 aa4.28□□□□□ -1.72
ATXN3-236ENST00000556220 GAGE4Q13068 117 aa4.28□□□□□ -1.72
ATXN3-236ENST00000556220 GAGE5Q13069 117 aa4.28□□□□□ -1.72
ATXN3-236ENST00000556220 ZNF876PQ49A33 203 aa4.28□□□□□ -1.72
ATXN3-236ENST00000556220 SPINK6Q6UWN8 80 aa4.28□□□□□ -1.72
ATXN3-236ENST00000556220 PRNTQ86SH4 94 aa4.28□□□□□ -1.72
ATXN3-236ENST00000556220 SVBPQ8N300 66 aa4.28□□□□□ -1.72
ATXN3-236ENST00000556220 C7orf33Q8WU49 177 aa4.28□□□□□ -1.72
ATXN3-236ENST00000556220 CHCHD7Q9BUK0 85 aa4.28□□□□□ -1.72
ATXN3-236ENST00000556220 PLAC8Q9NZF1 115 aa4.28□□□□□ -1.72
ATXN3-236ENST00000556220 NAGKQ9UJ70 344 aa4.28□□□□□ -1.72
ATXN3-236ENST00000556220 LENEPQ9Y5L5 61 aa4.28□□□□□ -1.72
ATXN3-236ENST00000556220 A0A087WX48 190 aa4.27□□□□□ -1.73
ATXN3-236ENST00000556220 A0A1B0GXF2 115 aa4.27□□□□□ -1.73
ATXN3-236ENST00000556220 RBAKDNA6NC62 111 aa4.27□□□□□ -1.73
ATXN3-236ENST00000556220 IFITM10A6NMD0 228 aa4.27□□□□□ -1.73
ATXN3-236ENST00000556220 M0R036 132 aa4.27□□□□□ -1.73
ATXN3-236ENST00000556220 SH2D1AO60880 128 aa4.27□□□□□ -1.73
ATXN3-236ENST00000556220 TYMSP04818 313 aa4.27□□□□□ -1.73
ATXN3-236ENST00000556220 MT3P25713 68 aa4.27□□□□□ -1.73
ATXN3-236ENST00000556220 FOXA3P55318 350 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-236ENST00000556220 PRR3P79522 188 aaKnown RBP4.27□□□□□ -1.73
ATXN3-236ENST00000556220 ENHOQ6UWT2 76 aa4.27□□□□□ -1.73
ATXN3-236ENST00000556220 FAM231DQ6ZW35 169 aa4.27□□□□□ -1.73
ATXN3-236ENST00000556220 BAGE2Q86Y30 109 aa4.27□□□□□ -1.73
ATXN3-236ENST00000556220 SFRP2Q96HF1 295 aa4.27□□□□□ -1.73
ATXN3-236ENST00000556220 OSTCQ9NRP0 149 aa4.27□□□□□ -1.73
ATXN3-236ENST00000556220 Q9UF83 564 aa4.27□□□□□ -1.73
ATXN3-236ENST00000556220 MUC17Q685J3 4493 aa4.26□□□□□ -1.73
ATXN3-236ENST00000556220 TRAV21A0A0B4J279 112 aa4.26□□□□□ -1.73
ATXN3-236ENST00000556220 LOC105371267A0A1B0GV96 52 aa4.26□□□□□ -1.73
ATXN3-236ENST00000556220 SMIM27A0A1W2PRY6 76 aa4.26□□□□□ -1.73
ATXN3-236ENST00000556220 F2Z2F3 143 aa4.26□□□□□ -1.73
ATXN3-236ENST00000556220 NUPR1O60356 82 aa4.26□□□□□ -1.73
ATXN3-236ENST00000556220 SNAPINO95295 136 aa4.26□□□□□ -1.73
ATXN3-236ENST00000556220 IGLC6P0CF74 106 aa4.26□□□□□ -1.73
ATXN3-236ENST00000556220 RHEBQ15382 184 aa4.26□□□□□ -1.73
ATXN3-236ENST00000556220 KCNIP4Q6PIL6 250 aa4.26□□□□□ -1.73
ATXN3-236ENST00000556220 SPACA4Q8TDM5 124 aa4.26□□□□□ -1.73
ATXN3-236ENST00000556220 PTH2Q96A98 100 aa4.26□□□□□ -1.73
ATXN3-236ENST00000556220 SAMD10Q9BYL1 202 aa4.26□□□□□ -1.73
ATXN3-236ENST00000556220 TRBV24-1A0A075B6N3 115 aa4.25□□□□□ -1.73
ATXN3-236ENST00000556220 IGHV3-64A0A075B6Q5 118 aa4.25□□□□□ -1.73
ATXN3-236ENST00000556220 MUC21A0A0G2JKD1 596 aa4.25□□□□□ -1.73
ATXN3-236ENST00000556220 MUC21A0A140T8X8 626 aa4.25□□□□□ -1.73
ATXN3-236ENST00000556220 CHTF8P0CG12 524 aa4.25□□□□□ -1.73
ATXN3-236ENST00000556220 CSN1S1P47710 185 aa4.25□□□□□ -1.73
ATXN3-236ENST00000556220 GNG4P50150 75 aa4.25□□□□□ -1.73
ATXN3-236ENST00000556220 CNBPP62633 177 aaKnown RBP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms