RNA–Protein interactions for RNA: ENST00000555737.5

RCCD1-204, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-204ENST00000555737 NAV2Q8IVL1 2488 aa13.12□□□□□ -0.31
RCCD1-204ENST00000555737 LRRK2Q5S007 2527 aa13.12□□□□□ -0.31
RCCD1-204ENST00000555737 A0A0J9YXY3 114 aa13.12□□□□□ -0.31
RCCD1-204ENST00000555737 C3orf56Q8N813 242 aa13.12□□□□□ -0.31
RCCD1-204ENST00000555737 LEPROTO15243 131 aa13.11□□□□□ -0.31
RCCD1-204ENST00000555737 TRIAP1O43715 76 aa13.11□□□□□ -0.31
RCCD1-204ENST00000555737 TTC32Q5I0X7 151 aa13.11□□□□□ -0.31
RCCD1-204ENST00000555737 ADAMTSL4-AS1Q5T5F5 129 aa13.11□□□□□ -0.31
RCCD1-204ENST00000555737 TMEM263Q8WUH6 116 aaKnown RBP13.11□□□□□ -0.31
RCCD1-204ENST00000555737 MXRA5Q9NR99 2828 aa13.11□□□□□ -0.31
RCCD1-204ENST00000555737 I3L3M4 83 aa13.11□□□□□ -0.31
RCCD1-204ENST00000555737 C19orf54Q5BKX5 351 aa13.11□□□□□ -0.31
RCCD1-204ENST00000555737 PKD1L2Q7Z442 2459 aa13.11□□□□□ -0.31
RCCD1-204ENST00000555737 MED14OSP0DP75 135 aa13.1□□□□□ -0.31
RCCD1-204ENST00000555737 GAGE2BQ13066 116 aa13.1□□□□□ -0.31
RCCD1-204ENST00000555737 LINC01620Q4KN68 170 aa13.1□□□□□ -0.31
RCCD1-204ENST00000555737 GAGE2EQ4V326 116 aa13.1□□□□□ -0.31
RCCD1-204ENST00000555737 GAGE2DQ9UEU5 116 aa13.1□□□□□ -0.31
RCCD1-204ENST00000555737 TNFRSF18Q9Y5U5 241 aa13.1□□□□□ -0.31
RCCD1-204ENST00000555737 LGALS9O00182 355 aa13.09□□□□□ -0.31
RCCD1-204ENST00000555737 NBL1P41271 181 aa13.09□□□□□ -0.31
RCCD1-204ENST00000555737 C2orf82Q6UX34 121 aa13.09□□□□□ -0.31
RCCD1-204ENST00000555737 PIMREGQ9BSJ6 248 aa13.09□□□□□ -0.31
RCCD1-204ENST00000555737 NDUFA12Q9UI09 145 aa13.09□□□□□ -0.31
RCCD1-204ENST00000555737 A0A0J9YX75 114 aa13.09□□□□□ -0.31
RCCD1-204ENST00000555737 CCL19Q99731 98 aa13.09□□□□□ -0.31
RCCD1-204ENST00000555737 CHD6Q8TD26 2715 aa13.08□□□□□ -0.31
RCCD1-204ENST00000555737 NIPBLQ6KC79 2804 aaeCLIP13.08□□□□□ -0.32
RCCD1-204ENST00000555737 DEFB131AP59861 70 aa13.07□□□□□ -0.32
RCCD1-204ENST00000555737 ATXN8Q156A1 80 aa13.07□□□□□ -0.32
RCCD1-204ENST00000555737 TRAV8-4A0A0B4J246 113 aa13.06□□□□□ -0.32
RCCD1-204ENST00000555737 A6NDX4 124 aa13.06□□□□□ -0.32
RCCD1-204ENST00000555737 NXPH4O95158 308 aa13.06□□□□□ -0.32
RCCD1-204ENST00000555737 BRI3O95415 125 aa13.06□□□□□ -0.32
RCCD1-204ENST00000555737 ANKRD17O75179 2603 aaKnown RBP13.06□□□□□ -0.32
RCCD1-204ENST00000555737 TRBV7-9A0A0J9YWB2 115 aa13.06□□□□□ -0.32
RCCD1-204ENST00000555737 SMIM20Q8N5G0 67 aa13.06□□□□□ -0.32
RCCD1-204ENST00000555737 RBMY1A1P0DJD3 496 aaKnown RBP13.06□□□□□ -0.32
RCCD1-204ENST00000555737 RBMY1CP0DJD4 496 aa13.06□□□□□ -0.32
RCCD1-204ENST00000555737 RBMY1FQ15415 496 aaKnown RBP13.06□□□□□ -0.32
RCCD1-204ENST00000555737 NF1P21359 2839 aa13.05□□□□□ -0.32
RCCD1-204ENST00000555737 DGAT2L7PQ6IED9 249 aa13.05□□□□□ -0.32
RCCD1-204ENST00000555737 Q6ZSN1 163 aa13.05□□□□□ -0.32
RCCD1-204ENST00000555737 C15orf53Q8NAA6 179 aa13.05□□□□□ -0.32
RCCD1-204ENST00000555737 C9orf85Q96MD7 179 aa13.05□□□□□ -0.32
RCCD1-204ENST00000555737 APRG1Q8IVJ8 170 aa13.05□□□□□ -0.32
RCCD1-204ENST00000555737 M0R2P5 195 aa13.04□□□□□ -0.32
RCCD1-204ENST00000555737 DEFB112Q30KQ8 113 aa13.04□□□□□ -0.32
RCCD1-204ENST00000555737 TMEM262E9PQX1 116 aa13.04□□□□□ -0.32
RCCD1-204ENST00000555737 C18orf65Q6ZTR6 163 aa13.04□□□□□ -0.32
RCCD1-204ENST00000555737 KLK9Q2XQG4 91 aa13.04□□□□□ -0.32
RCCD1-204ENST00000555737 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.03□□□□□ -0.32
RCCD1-204ENST00000555737 IGHV3-53P01767 116 aa13.03□□□□□ -0.32
RCCD1-204ENST00000555737 C11orf44Q8N8P7 122 aa13.03□□□□□ -0.32
RCCD1-204ENST00000555737 H3BMM0 161 aa13.02□□□□□ -0.32
RCCD1-204ENST00000555737 NDUFA7O95182 113 aa13.02□□□□□ -0.32
RCCD1-204ENST00000555737 MSMBP08118 114 aa13.02□□□□□ -0.32
RCCD1-204ENST00000555737 NSUN5P1Q3KNT7 163 aa13.02□□□□□ -0.32
RCCD1-204ENST00000555737 UBE2WQ96B02 151 aa13.02□□□□□ -0.32
RCCD1-204ENST00000555737 ICOSQ9Y6W8 199 aa13.02□□□□□ -0.32
RCCD1-204ENST00000555737 TEX15Q9BXT5 2789 aa13.02□□□□□ -0.33
RCCD1-204ENST00000555737 IGLV1-40P01703 118 aa13.02□□□□□ -0.33
RCCD1-204ENST00000555737 RPL13AP40429 203 aaKnown RBP13.02□□□□□ -0.33
RCCD1-204ENST00000555737 RHOHQ15669 191 aa13.02□□□□□ -0.33
RCCD1-204ENST00000555737 TRBV6-5A0A0K0K1A5 114 aa13.02□□□□□ -0.33
RCCD1-204ENST00000555737 CCDC179H3BU77 68 aa13.02□□□□□ -0.33
RCCD1-204ENST00000555737 SLURP1P55000 103 aa13.02□□□□□ -0.33
RCCD1-204ENST00000555737 IGKV3OR2-268A0A0C4DH90 116 aa13.01□□□□□ -0.33
RCCD1-204ENST00000555737 FN1P02751 2386 aaKnown RBP13.01□□□□□ -0.33
RCCD1-204ENST00000555737 POM121L12Q8N7R1 296 aa13.01□□□□□ -0.33
RCCD1-204ENST00000555737 HOXD3P31249 432 aaPredicted RBP13□□□□□ -0.33
RCCD1-204ENST00000555737 LINC01587Q99440 93 aa13□□□□□ -0.33
RCCD1-204ENST00000555737 COX6CP09669 75 aa13□□□□□ -0.33
RCCD1-204ENST00000555737 CFHR3Q02985 330 aa13□□□□□ -0.33
RCCD1-204ENST00000555737 LINC00467Q9BRT7 94 aa13□□□□□ -0.33
RCCD1-204ENST00000555737 CDKN2A-AS1Q9UH64 79 aa13□□□□□ -0.33
RCCD1-204ENST00000555737 TRAV13-1A0A0B4J241 112 aa13□□□□□ -0.33
RCCD1-204ENST00000555737 K7EQG2 157 aa13□□□□□ -0.33
RCCD1-204ENST00000555737 A0A0B4J2C4 111 aa12.99□□□□□ -0.33
RCCD1-204ENST00000555737 RPL32P62910 135 aaKnown RBP12.99□□□□□ -0.33
RCCD1-204ENST00000555737 SBSPONQ8IVN8 264 aa12.99□□□□□ -0.33
RCCD1-204ENST00000555737 UBE2E2Q96LR5 201 aa12.99□□□□□ -0.33
RCCD1-204ENST00000555737 CITED1Q99966 193 aa12.99□□□□□ -0.33
RCCD1-204ENST00000555737 C10orf105Q8TEF2 133 aa12.98□□□□□ -0.33
RCCD1-204ENST00000555737 H7C423 109 aa12.98□□□□□ -0.33
RCCD1-204ENST00000555737 NDUFV3P56181 108 aaKnown RBP12.97□□□□□ -0.33
RCCD1-204ENST00000555737 PSMB8P28062 276 aa12.97□□□□□ -0.33
RCCD1-204ENST00000555737 TRGV11A0A075B6L2 103 aa12.97□□□□□ -0.33
RCCD1-204ENST00000555737 IGHV1-58A0A0C4DH39 117 aa12.97□□□□□ -0.33
RCCD1-204ENST00000555737 TRBV10-2A0A0K0K1G8 114 aa12.97□□□□□ -0.33
RCCD1-204ENST00000555737 UCNP55089 124 aa12.97□□□□□ -0.33
RCCD1-204ENST00000555737 GAGE5Q13069 117 aa12.97□□□□□ -0.33
RCCD1-204ENST00000555737 GAGE6Q13070 117 aa12.97□□□□□ -0.33
RCCD1-204ENST00000555737 XCL2Q9UBD3 114 aa12.96□□□□□ -0.33
RCCD1-204ENST00000555737 H3BUA1 57 aa12.96□□□□□ -0.33
RCCD1-204ENST00000555737 NHLRC4P0CG21 123 aaPredicted RBP12.96□□□□□ -0.33
RCCD1-204ENST00000555737 IFITM1P13164 125 aa12.95□□□□□ -0.34
RCCD1-204ENST00000555737 DOPEY1Q5JWR5 2465 aa12.95□□□□□ -0.34
RCCD1-204ENST00000555737 K7EMT4 169 aa12.95□□□□□ -0.34
RCCD1-204ENST00000555737 LITAFQ99732 161 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms