RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 C9orf153Q5TBE3 101 aa6.58□□□□□ -1.36
SYNE2-217ENST00000555022 ITLN2Q8WWU7 325 aaPredicted RBP6.58□□□□□ -1.36
SYNE2-217ENST00000555022 IGLV4-3A0A075B6K6 122 aa6.58□□□□□ -1.36
SYNE2-217ENST00000555022 YAE1D1Q9NRH1 226 aa6.58□□□□□ -1.36
SYNE2-217ENST00000555022 IGHV4-4A0A075B6R2 117 aa6.58□□□□□ -1.36
SYNE2-217ENST00000555022 TRAV13-1A0A0B4J241 112 aa6.58□□□□□ -1.36
SYNE2-217ENST00000555022 LINC00694P0DN24 101 aa6.58□□□□□ -1.36
SYNE2-217ENST00000555022 MINOS1Q5TGZ0 78 aa6.58□□□□□ -1.36
SYNE2-217ENST00000555022 GAGE2AQ6NT46 116 aa6.58□□□□□ -1.36
SYNE2-217ENST00000555022 ABCA2Q9BZC7 2435 aa6.58□□□□□ -1.36
SYNE2-217ENST00000555022 LINC01619G3V211 115 aa6.57□□□□□ -1.36
SYNE2-217ENST00000555022 OVOL1O14753 267 aa6.57□□□□□ -1.36
SYNE2-217ENST00000555022 IGHV3-53P01767 116 aa6.57□□□□□ -1.36
SYNE2-217ENST00000555022 IGFL3Q6UXB1 125 aa6.57□□□□□ -1.36
SYNE2-217ENST00000555022 KIF25-AS1Q9Y6Z4 181 aa6.57□□□□□ -1.36
SYNE2-217ENST00000555022 NBEAL2Q6ZNJ1 2754 aa6.57□□□□□ -1.36
SYNE2-217ENST00000555022 LRRK2Q5S007 2527 aa6.57□□□□□ -1.36
SYNE2-217ENST00000555022 H3BUX3 64 aa6.57□□□□□ -1.36
SYNE2-217ENST00000555022 COX6CP09669 75 aa6.57□□□□□ -1.36
SYNE2-217ENST00000555022 PAPPA-AS1Q5QFB9 102 aa6.57□□□□□ -1.36
SYNE2-217ENST00000555022 SBSPONQ8IVN8 264 aa6.57□□□□□ -1.36
SYNE2-217ENST00000555022 POM121L12Q8N7R1 296 aa6.57□□□□□ -1.36
SYNE2-217ENST00000555022 FLNCQ14315 2725 aa6.57□□□□□ -1.36
SYNE2-217ENST00000555022 CHD6Q8TD26 2715 aa6.57□□□□□ -1.36
SYNE2-217ENST00000555022 IGKV3D-7A0A0C4DH55 119 aa6.57□□□□□ -1.36
SYNE2-217ENST00000555022 KHDC1LQ5JSQ8 128 aa6.57□□□□□ -1.36
SYNE2-217ENST00000555022 EDA2RQ9HAV5 297 aa6.57□□□□□ -1.36
SYNE2-217ENST00000555022 TRBV7-1A0A0A6YYK4 115 aa6.56□□□□□ -1.36
SYNE2-217ENST00000555022 NPFFO15130 113 aa6.56□□□□□ -1.36
SYNE2-217ENST00000555022 NBL1P41271 181 aa6.56□□□□□ -1.36
SYNE2-217ENST00000555022 PIP4P1Q86T03 277 aa6.56□□□□□ -1.36
SYNE2-217ENST00000555022 TMEM141Q96I45 108 aa6.56□□□□□ -1.36
SYNE2-217ENST00000555022 C11orf68Q9H3H3 251 aaKnown RBP6.56□□□□□ -1.36
SYNE2-217ENST00000555022 M0QY20 66 aa6.56□□□□□ -1.36
SYNE2-217ENST00000555022 C5orf56Q8N8D9 126 aa6.56□□□□□ -1.36
SYNE2-217ENST00000555022 MAPK1IP1LQ8NDC0 245 aa6.56□□□□□ -1.36
SYNE2-217ENST00000555022 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.55□□□□□ -1.36
SYNE2-217ENST00000555022 IGHV4-38-2P0DP08 117 aa6.55□□□□□ -1.36
SYNE2-217ENST00000555022 DGAT2L7PQ6IED9 249 aa6.55□□□□□ -1.36
SYNE2-217ENST00000555022 Q8N2B8 174 aa6.55□□□□□ -1.36
SYNE2-217ENST00000555022 C20orf203Q8NBC4 194 aa6.55□□□□□ -1.36
SYNE2-217ENST00000555022 RHOHQ15669 191 aa6.55□□□□□ -1.36
SYNE2-217ENST00000555022 SMCR5Q8TEV8 140 aa6.55□□□□□ -1.36
SYNE2-217ENST00000555022 TIMM17AQ99595 171 aa6.55□□□□□ -1.36
SYNE2-217ENST00000555022 CDKN2A-AS1Q9UH64 79 aa6.55□□□□□ -1.36
SYNE2-217ENST00000555022 IGF2-ASQ6U949 168 aa6.55□□□□□ -1.36
SYNE2-217ENST00000555022 TMEM190Q8WZ59 177 aa6.55□□□□□ -1.36
SYNE2-217ENST00000555022 SIRPDQ9H106 197 aa6.55□□□□□ -1.36
SYNE2-217ENST00000555022 TOMM7Q9P0U1 55 aa6.55□□□□□ -1.36
SYNE2-217ENST00000555022 VPREB3Q9UKI3 123 aa6.55□□□□□ -1.36
SYNE2-217ENST00000555022 DEFB136Q30KP8 78 aa6.54□□□□□ -1.36
SYNE2-217ENST00000555022 PIK3CD-AS1Q5SR53 167 aa6.54□□□□□ -1.36
SYNE2-217ENST00000555022 Q6ZSN1 163 aa6.54□□□□□ -1.36
SYNE2-217ENST00000555022 TNFRSF18Q9Y5U5 241 aa6.54□□□□□ -1.36
SYNE2-217ENST00000555022 Q9H8V8 135 aa6.54□□□□□ -1.36
SYNE2-217ENST00000555022 NF1P21359 2839 aa6.54□□□□□ -1.36
SYNE2-217ENST00000555022 A0A0B4J2C4 111 aa6.54□□□□□ -1.36
SYNE2-217ENST00000555022 IGHV1-69DA0A0B4J2H0 117 aa6.54□□□□□ -1.36
SYNE2-217ENST00000555022 RNASE1P07998 156 aaKnown RBP6.54□□□□□ -1.36
SYNE2-217ENST00000555022 SDIM1Q6ZPB5 146 aa6.54□□□□□ -1.36
SYNE2-217ENST00000555022 A0A087WVE0 104 aa6.53□□□□□ -1.36
SYNE2-217ENST00000555022 FAM110AQ9BQ89 295 aa6.53□□□□□ -1.36
SYNE2-217ENST00000555022 MTORP42345 2549 aa6.53□□□□□ -1.36
SYNE2-217ENST00000555022 SOCS3O14543 225 aa6.53□□□□□ -1.36
SYNE2-217ENST00000555022 PPP1R17O96001 155 aa6.53□□□□□ -1.36
SYNE2-217ENST00000555022 CFHR3Q02985 330 aa6.53□□□□□ -1.36
SYNE2-217ENST00000555022 LINC00467Q9BRT7 94 aa6.53□□□□□ -1.36
SYNE2-217ENST00000555022 U3KQE9 123 aa6.53□□□□□ -1.36
SYNE2-217ENST00000555022 PKD1L2Q7Z442 2459 aa6.52□□□□□ -1.37
SYNE2-217ENST00000555022 TRBV27A0A0K0K1C4 114 aa6.52□□□□□ -1.37
SYNE2-217ENST00000555022 hADV29S1A0JD25 119 aa6.52□□□□□ -1.37
SYNE2-217ENST00000555022 DAZ2Q13117 558 aaKnown RBP6.52□□□□□ -1.37
SYNE2-217ENST00000555022 DAZ4Q86SG3 579 aaKnown RBP6.52□□□□□ -1.37
SYNE2-217ENST00000555022 TMEM101Q96IK0 257 aa6.52□□□□□ -1.37
SYNE2-217ENST00000555022 LITAFQ99732 161 aa6.52□□□□□ -1.37
SYNE2-217ENST00000555022 DAZ1Q9NQZ3 744 aaKnown RBP6.52□□□□□ -1.37
SYNE2-217ENST00000555022 DAZ3Q9NR90 486 aaKnown RBP6.52□□□□□ -1.37
SYNE2-217ENST00000555022 MINOS1-NBL1R4GNA1 71 aa6.52□□□□□ -1.37
SYNE2-217ENST00000555022 TINCRA0A1B0GVN0 87 aa6.52□□□□□ -1.37
SYNE2-217ENST00000555022 ATP5G1P05496 136 aa6.52□□□□□ -1.37
SYNE2-217ENST00000555022 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.52□□□□□ -1.37
SYNE2-217ENST00000555022 LINC01587Q99440 93 aa6.52□□□□□ -1.37
SYNE2-217ENST00000555022 MOB4Q9Y3A3 225 aa6.52□□□□□ -1.37
SYNE2-217ENST00000555022 IGHV1OR15-1A0A075B7D0 117 aa6.51□□□□□ -1.37
SYNE2-217ENST00000555022 SLPIP03973 132 aa6.51□□□□□ -1.37
SYNE2-217ENST00000555022 PRB1P04280 392 aa6.51□□□□□ -1.37
SYNE2-217ENST00000555022 COX6A2Q02221 97 aa6.51□□□□□ -1.37
SYNE2-217ENST00000555022 C11orf44Q8N8P7 122 aa6.51□□□□□ -1.37
SYNE2-217ENST00000555022 MRPL53Q96EL3 112 aaKnown RBP6.51□□□□□ -1.37
SYNE2-217ENST00000555022 PIMREGQ9BSJ6 248 aa6.51□□□□□ -1.37
SYNE2-217ENST00000555022 IGHG2P01859 326 aa6.51□□□□□ -1.37
SYNE2-217ENST00000555022 HERVK_113P63121 156 aa6.51□□□□□ -1.37
SYNE2-217ENST00000555022 TMEM61Q8N0U2 210 aa6.51□□□□□ -1.37
SYNE2-217ENST00000555022 CYSTM1Q9H1C7 97 aa6.51□□□□□ -1.37
SYNE2-217ENST00000555022 RBMY1A1P0DJD3 496 aaKnown RBP6.51□□□□□ -1.37
SYNE2-217ENST00000555022 RBMY1CP0DJD4 496 aa6.51□□□□□ -1.37
SYNE2-217ENST00000555022 RBMY1FQ15415 496 aaKnown RBP6.51□□□□□ -1.37
SYNE2-217ENST00000555022 MIAQ16674 131 aa6.51□□□□□ -1.37
SYNE2-217ENST00000555022 WFDC9Q8NEX5 89 aa6.51□□□□□ -1.37
SYNE2-217ENST00000555022 TRBV30A0A0K0K1B3 111 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms