RNA–Protein interactions for RNA: ENST00000554822.5

LINC01550-204, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 3

Gene LINC01550, Length 852 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-204ENST00000554822 OR11H1Q8NG94 326 aa3.69□□□□□ -1.82
LINC01550-204ENST00000554822 OR9G4Q8NGQ1 327 aa3.69□□□□□ -1.82
LINC01550-204ENST00000554822 OR1N2Q8NGR9 330 aa3.69□□□□□ -1.82
LINC01550-204ENST00000554822 ZNF418Q8TF45 676 aaPredicted RBP3.69□□□□□ -1.82
LINC01550-204ENST00000554822 RNF185Q96GF1 192 aa3.69□□□□□ -1.82
LINC01550-204ENST00000554822 C20orf144Q9BQM9 153 aa3.69□□□□□ -1.82
LINC01550-204ENST00000554822 TMEM70Q9BUB7 260 aa3.69□□□□□ -1.82
LINC01550-204ENST00000554822 KRTAP4-4Q9BYR3 166 aa3.69□□□□□ -1.82
LINC01550-204ENST00000554822 TRAV25A0A0B4J276 109 aa3.68□□□□□ -1.82
LINC01550-204ENST00000554822 C7orf71A4D174 169 aa3.68□□□□□ -1.82
LINC01550-204ENST00000554822 RNASE4P34096 147 aaKnown RBP3.68□□□□□ -1.82
LINC01550-204ENST00000554822 PSMG4Q5JS54 123 aa3.68□□□□□ -1.82
LINC01550-204ENST00000554822 SPANXN1Q5VSR9 72 aa3.68□□□□□ -1.82
LINC01550-204ENST00000554822 SPATA12Q7Z6I5 190 aa3.68□□□□□ -1.82
LINC01550-204ENST00000554822 KLHL30-AS1Q8NEE0 82 aa3.68□□□□□ -1.82
LINC01550-204ENST00000554822 OR10AG1Q8NH19 301 aa3.68□□□□□ -1.82
LINC01550-204ENST00000554822 MRAP2Q96G30 205 aa3.68□□□□□ -1.82
LINC01550-204ENST00000554822 VAMP8Q9BV40 100 aa3.68□□□□□ -1.82
LINC01550-204ENST00000554822 PRO1933Q9H354 126 aa3.68□□□□□ -1.82
LINC01550-204ENST00000554822 SIGLEC8Q9NYZ4 499 aa3.68□□□□□ -1.82
LINC01550-204ENST00000554822 HSPB8Q9UJY1 196 aa3.68□□□□□ -1.82
LINC01550-204ENST00000554822 MUC21A0A0G2JKD1 596 aa3.67□□□□□ -1.82
LINC01550-204ENST00000554822 MUC21A0A140T8X8 626 aa3.67□□□□□ -1.82
LINC01550-204ENST00000554822 C20orf202A1L168 122 aa3.67□□□□□ -1.82
LINC01550-204ENST00000554822 SYS1-DBNDD2H3BUS1 97 aa3.67□□□□□ -1.82
LINC01550-204ENST00000554822 H3BVH4 76 aa3.67□□□□□ -1.82
LINC01550-204ENST00000554822 M0R143 59 aa3.67□□□□□ -1.82
LINC01550-204ENST00000554822 NPYP01303 97 aa3.67□□□□□ -1.82
LINC01550-204ENST00000554822 ZNF688P0C7X2 276 aa3.67□□□□□ -1.82
LINC01550-204ENST00000554822 RNASE3P12724 160 aaKnown RBP3.67□□□□□ -1.82
LINC01550-204ENST00000554822 S100A4P26447 101 aaKnown RBP3.67□□□□□ -1.82
LINC01550-204ENST00000554822 IFI27P40305 119 aaPredicted RBP3.67□□□□□ -1.82
LINC01550-204ENST00000554822 CDKN1BP46527 198 aa3.67□□□□□ -1.82
LINC01550-204ENST00000554822 TFPI2P48307 235 aa3.67□□□□□ -1.82
LINC01550-204ENST00000554822 DEFB1P60022 68 aa3.67□□□□□ -1.82
LINC01550-204ENST00000554822 DEFB136Q30KP8 78 aa3.67□□□□□ -1.82
LINC01550-204ENST00000554822 KRTAP5-4Q6L8H1 288 aa3.67□□□□□ -1.82
LINC01550-204ENST00000554822 AMTNQ6UX39 209 aa3.67□□□□□ -1.82
LINC01550-204ENST00000554822 Q6ZQT7 251 aa3.67□□□□□ -1.82
LINC01550-204ENST00000554822 POM121L12Q8N7R1 296 aa3.67□□□□□ -1.82
LINC01550-204ENST00000554822 LINC01006Q8NI28 216 aa3.67□□□□□ -1.82
LINC01550-204ENST00000554822 MIEN1Q9BRT3 115 aa3.67□□□□□ -1.82
LINC01550-204ENST00000554822 CHCHD5Q9BSY4 110 aa3.67□□□□□ -1.82
LINC01550-204ENST00000554822 MAP1LC3CQ9BXW4 147 aa3.67□□□□□ -1.82
LINC01550-204ENST00000554822 MAP1LC3AQ9H492 121 aa3.67□□□□□ -1.82
LINC01550-204ENST00000554822 NXT2Q9NPJ8 142 aaKnown RBP3.67□□□□□ -1.82
LINC01550-204ENST00000554822 PHLDA3Q9Y5J5 127 aa3.67□□□□□ -1.82
LINC01550-204ENST00000554822 TSSC4Q9Y5U2 329 aaPredicted RBP3.67□□□□□ -1.82
LINC01550-204ENST00000554822 TRRAPQ9Y4A5 3859 aa3.67□□□□□ -1.82
LINC01550-204ENST00000554822 HERC1Q15751 4861 aa3.66□□□□□ -1.82
LINC01550-204ENST00000554822 A0A096LNJ9 63 aa3.66□□□□□ -1.82
LINC01550-204ENST00000554822 TRAV12-3A0A0B4J271 114 aa3.66□□□□□ -1.82
LINC01550-204ENST00000554822 OR4C46A6NHA9 309 aa3.66□□□□□ -1.82
LINC01550-204ENST00000554822 SMKR1H3BMG3 65 aa3.66□□□□□ -1.82
LINC01550-204ENST00000554822 K7EMI3 77 aa3.66□□□□□ -1.82
LINC01550-204ENST00000554822 M0R381 172 aa3.66□□□□□ -1.82
LINC01550-204ENST00000554822 GNRH2O43555 120 aa3.66□□□□□ -1.82
LINC01550-204ENST00000554822 PPP1R17O96001 155 aa3.66□□□□□ -1.82
LINC01550-204ENST00000554822 HBDP02042 147 aa3.66□□□□□ -1.82
LINC01550-204ENST00000554822 HLA-DRB4P13762 266 aa3.66□□□□□ -1.82
LINC01550-204ENST00000554822 EVI2AP22794 236 aa3.66□□□□□ -1.82
LINC01550-204ENST00000554822 NUTF2P61970 127 aaKnown RBP3.66□□□□□ -1.82
LINC01550-204ENST00000554822 DEFB114Q30KQ6 69 aa3.66□□□□□ -1.82
LINC01550-204ENST00000554822 TMEM61Q8N0U2 210 aa3.66□□□□□ -1.82
LINC01550-204ENST00000554822 Q8N8P6 123 aa3.66□□□□□ -1.82
LINC01550-204ENST00000554822 OR2K2Q8NGT1 345 aa3.66□□□□□ -1.82
LINC01550-204ENST00000554822 DYNLRB2Q8TF09 96 aa3.66□□□□□ -1.82
LINC01550-204ENST00000554822 AP1S3Q96PC3 154 aa3.66□□□□□ -1.82
LINC01550-204ENST00000554822 DPH3P1Q9H4G8 78 aa3.66□□□□□ -1.82
LINC01550-204ENST00000554822 HLA-DRB4X5D2U9 266 aa3.66□□□□□ -1.82
LINC01550-204ENST00000554822 IGLV2-18A0A075B6J9 118 aa3.65□□□□□ -1.83
LINC01550-204ENST00000554822 IGLV4-3A0A075B6K6 122 aa3.65□□□□□ -1.83
LINC01550-204ENST00000554822 IGHV1OR15-1A0A075B7D0 117 aa3.65□□□□□ -1.83
LINC01550-204ENST00000554822 TRAV9-2A0A087WT02 112 aa3.65□□□□□ -1.83
LINC01550-204ENST00000554822 IGHV3-16A0A0C4DH30 117 aa3.65□□□□□ -1.83
LINC01550-204ENST00000554822 LOC389332A0A1B0GUA5 103 aa3.65□□□□□ -1.83
LINC01550-204ENST00000554822 A0A1B0GV90 55 aa3.65□□□□□ -1.83
LINC01550-204ENST00000554822 H0Y8G0 127 aa3.65□□□□□ -1.83
LINC01550-204ENST00000554822 H3BMM0 161 aa3.65□□□□□ -1.83
LINC01550-204ENST00000554822 NCR2O95944 276 aa3.65□□□□□ -1.83
LINC01550-204ENST00000554822 CD7P09564 240 aa3.65□□□□□ -1.83
LINC01550-204ENST00000554822 CD28P10747 220 aa3.65□□□□□ -1.83
LINC01550-204ENST00000554822 FCER1GP30273 86 aa3.65□□□□□ -1.83
LINC01550-204ENST00000554822 CMC4P56277 68 aaPredicted RBP3.65□□□□□ -1.83
LINC01550-204ENST00000554822 DEFB131AP59861 70 aa3.65□□□□□ -1.83
LINC01550-204ENST00000554822 RPL32P62910 135 aaKnown RBP3.65□□□□□ -1.83
LINC01550-204ENST00000554822 SPATA45Q537H7 98 aa3.65□□□□□ -1.83
LINC01550-204ENST00000554822 LINC01545Q5VT33 79 aa3.65□□□□□ -1.83
LINC01550-204ENST00000554822 LINC00173Q6ZV60 143 aa3.65□□□□□ -1.83
LINC01550-204ENST00000554822 MTURNQ8N3F0 131 aa3.65□□□□□ -1.83
LINC01550-204ENST00000554822 C9orf85Q96MD7 179 aa3.65□□□□□ -1.83
LINC01550-204ENST00000554822 C20orf78Q9BR46 151 aa3.65□□□□□ -1.83
LINC01550-204ENST00000554822 LINC00467Q9BRT7 94 aa3.65□□□□□ -1.83
LINC01550-204ENST00000554822 OCR1Q9BZK8 76 aa3.65□□□□□ -1.83
LINC01550-204ENST00000554822 KIF25-AS1Q9Y6Z4 181 aa3.65□□□□□ -1.83
LINC01550-204ENST00000554822 COL7A1Q02388 2944 aa3.65□□□□□ -1.83
LINC01550-204ENST00000554822 LINC01549A6NIU2 74 aa3.64□□□□□ -1.83
LINC01550-204ENST00000554822 LY6G6DO95868 133 aa3.64□□□□□ -1.83
LINC01550-204ENST00000554822 SMIM17P0DL12 118 aa3.64□□□□□ -1.83
LINC01550-204ENST00000554822 IGLC3P0DOY3 106 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms